| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299043
Identifier: 146299043
GI number: 146299043
Start: 1466839
End: 1467333
Strand: Direct
Name: 146299043
Synonym: Fjoh_1283
Alternate gene names: NA
Gene position: 1466839-1467333 (Clockwise)
Preceding gene: 146299042
Following gene: 146299051
Centisome position: 24.06
GC content: 28.89
Gene sequence:
>495_bases ATGACAGAGCCAGTATCAAATGATTCAGCTTCACTTAAAGTATTTATAAAGGAAATTCATAAAAACTATGAAATCTGGTA TGCTAAAACATGCAGATTAAATTATAGAATTTGGTATTCGCTCCAGTTAATTTCATTATTAAGCGGTTTTTTGACTTCAA TTTTTATAGCATATCAAGATAAAGATTCATGGACAGAAACAACAAGGCTTATTAGTGTTCTCATTCCATTATTTGGATCA TTAGCAGGAACGCTTATTTTACAATTTAAAATTTTTGAAACATGGAAGCTGAGGGAAGAAGGCAGGATTTCATTTCAAAA TTTAGTTAATTATAGTAACAGCCAGCTTTTAAAGTGTAAAAGTCAAGATGATTTTCAAAAACTATTTGAGGAAATAACGC TTAAAACAAATGAAATTGAAAATGAACAATCAAATAAATTTTTTGCATTGTACGGTTCCAATTTTATTGCCTCGTTTGCA CTAGATAAAAAGTAG
Upstream 100 bases:
>100_bases AAAAAAACAGGTATTATTACTTAATTGTTCTTTGATAATAAATTATACATTGCGTTGTTTTTCAGTTGATTGTGTTGTGA ACTCTTAAAAAATAATAACT
Downstream 100 bases:
>100_bases ATTATAAAAGATTTAATCCTTTTAAATTAAAAAAGAGATTTCAAATTTGAAATCTCTTTTCACAATAAATTATATTTTAT AAAAGGCTTACTTTTCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTEPVSNDSASLKVFIKEIHKNYEIWYAKTCRLNYRIWYSLQLISLLSGFLTSIFIAYQDKDSWTETTRLISVLIPLFGS LAGTLILQFKIFETWKLREEGRISFQNLVNYSNSQLLKCKSQDDFQKLFEEITLKTNEIENEQSNKFFALYGSNFIASFA LDKK
Sequences:
>Translated_164_residues MTEPVSNDSASLKVFIKEIHKNYEIWYAKTCRLNYRIWYSLQLISLLSGFLTSIFIAYQDKDSWTETTRLISVLIPLFGS LAGTLILQFKIFETWKLREEGRISFQNLVNYSNSQLLKCKSQDDFQKLFEEITLKTNEIENEQSNKFFALYGSNFIASFA LDKK >Mature_163_residues TEPVSNDSASLKVFIKEIHKNYEIWYAKTCRLNYRIWYSLQLISLLSGFLTSIFIAYQDKDSWTETTRLISVLIPLFGSL AGTLILQFKIFETWKLREEGRISFQNLVNYSNSQLLKCKSQDDFQKLFEEITLKTNEIENEQSNKFFALYGSNFIASFAL DKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19213; Mature: 19082
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPVSNDSASLKVFIKEIHKNYEIWYAKTCRLNYRIWYSLQLISLLSGFLTSIFIAYQD CCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHEEEECC KDSWTETTRLISVLIPLFGSLAGTLILQFKIFETWKLREEGRISFQNLVNYSNSQLLKCK CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHEECCCCCCEEHHHHHCCCCCCEEEEC SQDDFQKLFEEITLKTNEIENEQSNKFFALYGSNFIASFALDKK CCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCC >Mature Secondary Structure TEPVSNDSASLKVFIKEIHKNYEIWYAKTCRLNYRIWYSLQLISLLSGFLTSIFIAYQD CCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHEEEECC KDSWTETTRLISVLIPLFGSLAGTLILQFKIFETWKLREEGRISFQNLVNYSNSQLLKCK CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHEECCCCCCEEHHHHHCCCCCCEEEEC SQDDFQKLFEEITLKTNEIENEQSNKFFALYGSNFIASFALDKK CCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA