| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is fepA [C]
Identifier: 146299020
GI number: 146299020
Start: 1433998
End: 1436598
Strand: Direct
Name: fepA [C]
Synonym: Fjoh_1260
Alternate gene names: 146299020
Gene position: 1433998-1436598 (Clockwise)
Preceding gene: 146299017
Following gene: 146299021
Centisome position: 23.52
GC content: 36.18
Gene sequence:
>2601_bases ATGTTTTGCCTATTTTTTTTACCAAATAATCTGTTTGCTCAAAATACAGCTAAAGTTTCAGGAAAAGTACTCGACGATAG CGGCGTAACAATTCCCGGAGCAAACGTAACACTTAAGGAAACAGGAAAAAGCACCGTTACAGACGAAAACGGAGGATATT CTTTCTCAAACGTCGAAGCAGGAACCTACACTATTATGGCAACAAATGTGGGTTACAAAACTTTCGAGAAAAAAATTGCC TTAAAAGAGGGAGAATCTATAGAGGTAAGCTTACTTCTTGAAGGCGAATCACAAAGTTTAAAAGAAGTTGTCGTAACAGG TTCATCTGCTCCAAGATCTAAACTTGAATCGAGCGTTGCCATTACCACAATGGGAGCCAAAGCTATTGAAGACCGAGCGC CATCGAGCACGGCGGCGTTGCTGCAGACTATTCCGGGATTTGTAGTTGAAGCATCTGGAGGAGAAATTGGAAACAACCTT TTTGCAAGAGGAATTCCGTCTGCGGGAGCGTATGAATATGTACAGATTCAGGAAGACGGATTACCGGTTTTTGAAGATGG AGCTTTGCAATTTGCCAATGCCGATACTTTTTACAGATTAGACGAAACAGTAAGCAAAATGGAAGCTGTTCGTGGAGGTT CTGCTTCAATTTTCGCCAACAATGCTCCGGGAGGAATCATCAACTTTATTTCAAAAACAGGTCAGAATGATTTTCAAGGA AGAGCAAAATTTACAACCTCAGATTACGGAATGTTTAGAACCGACCTTAATTTATCAGGTGCTTTAATTCAGGATAAATT ATTTTTTAATGTCGGCGGATTTTACAGAACTGACAATGGAGTAAGAAATACTGGTTTTACTGCCAACAAGGGTGGACAAA TAAAAGGAAACATCACTTATAAATTTGATGACAACGATTATTTAAGAATCAATTTCAAACATCTTGATGACAGAAATACA TTCTATTTACCAATCCCTTTAAAAAGCAACAACGGAAAAGTGGAAGGAATTCCAGGCTTTAATCCAAATTACGGAACATT GACTTCAGTAAATTTCAGTCATTTAAATGTACCTCAATACGGAGGCGGAACTTTCAGCGCAGATTTAGAAGATGGTTCAC ATCCAATTATCAACTCAATTGGAGCTGAATTTAAAAAGAAAATTTCTGAAAAAGTTACTTTCAAAAATGCTTTCAAACAA ACAAGCATCGATTTAAATTACAATGCTATTTTTCCTAATGGAGGACCTTGGACACAAGATGCTTATGCAGCAGATGTTCA AAATACAACAGCAGGAAACCTTGCTTATACGTATGTAGATAATGGTGCAGCACTTGATCCAAACGCTTTAATTATGAGAG CAGATCTTTGGCACATCGAGAAGAAAATGAGCAATTTTGCGAATAATTTCTCTTTTTCTTTTGATTTAGATCCGGTGAAA CTAACAGCGGGTTACTACTATTCTAACTGGAAATCAAATCAATACTGGAACTGGAATTCGTATTTGGTAAGTGTTTCAGA CAATCCGAGATTATTAAATGTAAAAGATAATACAACAGGAGTTGATCATACATGGAATGGTGTAGAAAGAATTACGTGGT TAGAAAGAGACGCGCAGACAAAAGGGCTTTTAAATGATATTTATGCTGATGCCGAAATTAAAGCGACAGACAATTTAACC TTTAATGCAGGTTTAAGATACAACAAAGACAAATATTCCGGATACAGAGACAACGCCAGATTTTTTGCCGAAAACTTAGG AATTTTAGATAATAATACGGCGGATGATGCAGTAACAACAGTAAAAGGAAATCCTTATACTTATTGGAGATATGATGTAA GTGAATGGTCGTATACTGCAGCGGGAAATTACAAATTCAACGACAATATGGCTTCATACGTGCGTTACAGCCACGGTTTT AGATCTCCAATTGAAGAATCGTTTTATGATAATGCAGCCAATTTAAGCAAATTGGAAAATACAGAAGTAAATCAGTTTGA GCTGGGTTATAAATATTCAAGTTCTTTCTTCTCTGTAAATGCGAATTTGTTTCACATGAATTTGAAAAATGTGGCGTTCA CGGATATTTTATCTGATGGATCTTCAGAAAATAAATTTGCCGATGTAAACAATATTGGTCTTGAAGTAGAAACGAATGCA AGATATAAATTTGCGAAACTGAACTTTACATTCACAGTTCAAAAACCAGAATACGACAACTTTACAGGGACAAATGCAGA CGGTTCTACTTTTGATTTTAATGGAAATACTGCACGAAGAATCCCTAAATTTTTCTGCAACCTAAGACCTGAAGTTGATA TTACAAAAGATTTTACAGCTTATGTTCAGTTTTCTTATTACGATAAAAAATTCACGAATCAGGATAACAAACAAGTTTTA CCGGCTTACAAAGAAGTTGGAGCAGGTTTAAATTACACGTATAACAATCTTCGTTTTGCAGTAGATGCTTCAAACTTATT CAACGAAATTGGTTTAACAGAAGGAGATCCAAGACAAACAACATCTGCAGCGAGCGATGTGTTTATGGCAAGACCTATTT TAGGACGTGCTTTTAGATTTTCGGTAGCGATTAATTTCTAA
Upstream 100 bases:
>100_bases TTATAATTTGTTTTTAAGTTTGACAGTGATAACCATAATTACTAACTAACCGAACAAAAAAATGAAAAAGCTGCACCATT ATTTAGGTACATTATTTTTA
Downstream 100 bases:
>100_bases ATTTATATAAGAGTAAAAAGAATTAAACACATAGAAACATAGATTTTTATCACTCAAAAAAAGAGCAAAATAAGAAACTA ATTTCCACACATAGTTATGT
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Siderophore Receptor; NB-Dependent Outer Membrane Receptor; Outer Membrane Protein; NB-Dependent Outer Membrane Receptor Protein; Nb-Dependent Receptor; NB-Linked Outer Membrane Receptor; NB-Dependent Receptor HmuR; Ferrichrome-Iron Receptor; Nb-Dependent Receptor Plug; NB Dependent/Ligand-Gated Channel; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Outer Membrane Protein; NB Dependent Receptor; Exported nB-Dependent Receptor Protein; NB-Dependent Receptor Subfamily; NB-Linked Outer Membrane Receptor P; NB-Dependent Receptor Domain-Containing Protein; Outer Membrane Receptor Protein; NB-Dependent Receptor Plug Domain Protein; B12 Family nB-Dependent Receptor
Number of amino acids: Translated: 866; Mature: 866
Protein sequence:
>866_residues MFCLFFLPNNLFAQNTAKVSGKVLDDSGVTIPGANVTLKETGKSTVTDENGGYSFSNVEAGTYTIMATNVGYKTFEKKIA LKEGESIEVSLLLEGESQSLKEVVVTGSSAPRSKLESSVAITTMGAKAIEDRAPSSTAALLQTIPGFVVEASGGEIGNNL FARGIPSAGAYEYVQIQEDGLPVFEDGALQFANADTFYRLDETVSKMEAVRGGSASIFANNAPGGIINFISKTGQNDFQG RAKFTTSDYGMFRTDLNLSGALIQDKLFFNVGGFYRTDNGVRNTGFTANKGGQIKGNITYKFDDNDYLRINFKHLDDRNT FYLPIPLKSNNGKVEGIPGFNPNYGTLTSVNFSHLNVPQYGGGTFSADLEDGSHPIINSIGAEFKKKISEKVTFKNAFKQ TSIDLNYNAIFPNGGPWTQDAYAADVQNTTAGNLAYTYVDNGAALDPNALIMRADLWHIEKKMSNFANNFSFSFDLDPVK LTAGYYYSNWKSNQYWNWNSYLVSVSDNPRLLNVKDNTTGVDHTWNGVERITWLERDAQTKGLLNDIYADAEIKATDNLT FNAGLRYNKDKYSGYRDNARFFAENLGILDNNTADDAVTTVKGNPYTYWRYDVSEWSYTAAGNYKFNDNMASYVRYSHGF RSPIEESFYDNAANLSKLENTEVNQFELGYKYSSSFFSVNANLFHMNLKNVAFTDILSDGSSENKFADVNNIGLEVETNA RYKFAKLNFTFTVQKPEYDNFTGTNADGSTFDFNGNTARRIPKFFCNLRPEVDITKDFTAYVQFSYYDKKFTNQDNKQVL PAYKEVGAGLNYTYNNLRFAVDASNLFNEIGLTEGDPRQTTSAASDVFMARPILGRAFRFSVAINF
Sequences:
>Translated_866_residues MFCLFFLPNNLFAQNTAKVSGKVLDDSGVTIPGANVTLKETGKSTVTDENGGYSFSNVEAGTYTIMATNVGYKTFEKKIA LKEGESIEVSLLLEGESQSLKEVVVTGSSAPRSKLESSVAITTMGAKAIEDRAPSSTAALLQTIPGFVVEASGGEIGNNL FARGIPSAGAYEYVQIQEDGLPVFEDGALQFANADTFYRLDETVSKMEAVRGGSASIFANNAPGGIINFISKTGQNDFQG RAKFTTSDYGMFRTDLNLSGALIQDKLFFNVGGFYRTDNGVRNTGFTANKGGQIKGNITYKFDDNDYLRINFKHLDDRNT FYLPIPLKSNNGKVEGIPGFNPNYGTLTSVNFSHLNVPQYGGGTFSADLEDGSHPIINSIGAEFKKKISEKVTFKNAFKQ TSIDLNYNAIFPNGGPWTQDAYAADVQNTTAGNLAYTYVDNGAALDPNALIMRADLWHIEKKMSNFANNFSFSFDLDPVK LTAGYYYSNWKSNQYWNWNSYLVSVSDNPRLLNVKDNTTGVDHTWNGVERITWLERDAQTKGLLNDIYADAEIKATDNLT FNAGLRYNKDKYSGYRDNARFFAENLGILDNNTADDAVTTVKGNPYTYWRYDVSEWSYTAAGNYKFNDNMASYVRYSHGF RSPIEESFYDNAANLSKLENTEVNQFELGYKYSSSFFSVNANLFHMNLKNVAFTDILSDGSSENKFADVNNIGLEVETNA RYKFAKLNFTFTVQKPEYDNFTGTNADGSTFDFNGNTARRIPKFFCNLRPEVDITKDFTAYVQFSYYDKKFTNQDNKQVL PAYKEVGAGLNYTYNNLRFAVDASNLFNEIGLTEGDPRQTTSAASDVFMARPILGRAFRFSVAINF >Mature_866_residues MFCLFFLPNNLFAQNTAKVSGKVLDDSGVTIPGANVTLKETGKSTVTDENGGYSFSNVEAGTYTIMATNVGYKTFEKKIA LKEGESIEVSLLLEGESQSLKEVVVTGSSAPRSKLESSVAITTMGAKAIEDRAPSSTAALLQTIPGFVVEASGGEIGNNL FARGIPSAGAYEYVQIQEDGLPVFEDGALQFANADTFYRLDETVSKMEAVRGGSASIFANNAPGGIINFISKTGQNDFQG RAKFTTSDYGMFRTDLNLSGALIQDKLFFNVGGFYRTDNGVRNTGFTANKGGQIKGNITYKFDDNDYLRINFKHLDDRNT FYLPIPLKSNNGKVEGIPGFNPNYGTLTSVNFSHLNVPQYGGGTFSADLEDGSHPIINSIGAEFKKKISEKVTFKNAFKQ TSIDLNYNAIFPNGGPWTQDAYAADVQNTTAGNLAYTYVDNGAALDPNALIMRADLWHIEKKMSNFANNFSFSFDLDPVK LTAGYYYSNWKSNQYWNWNSYLVSVSDNPRLLNVKDNTTGVDHTWNGVERITWLERDAQTKGLLNDIYADAEIKATDNLT FNAGLRYNKDKYSGYRDNARFFAENLGILDNNTADDAVTTVKGNPYTYWRYDVSEWSYTAAGNYKFNDNMASYVRYSHGF RSPIEESFYDNAANLSKLENTEVNQFELGYKYSSSFFSVNANLFHMNLKNVAFTDILSDGSSENKFADVNNIGLEVETNA RYKFAKLNFTFTVQKPEYDNFTGTNADGSTFDFNGNTARRIPKFFCNLRPEVDITKDFTAYVQFSYYDKKFTNQDNKQVL PAYKEVGAGLNYTYNNLRFAVDASNLFNEIGLTEGDPRQTTSAASDVFMARPILGRAFRFSVAINF
Specific function: This Protein Is Involved In The Initial Step Of Iron Uptake By Binding Ferrienterobactin (Fe-Ent), An Iron Chelatin Siderophore That Allows E.Coli To Extract Iron From The Environment. Fepa Also Acts As A Receptor For Colicins B And D. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96164; Mature: 96164
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCLFFLPNNLFAQNTAKVSGKVLDDSGVTIPGANVTLKETGKSTVTDENGGYSFSNVEA CEEEEEECCCCCCCCCCCCCCEEECCCCCEECCCCEEEECCCCCCCCCCCCCEEECCCCC GTYTIMATNVGYKTFEKKIALKEGESIEVSLLLEGESQSLKEVVVTGSSAPRSKLESSVA CEEEEEEECCCCHHHHHEEEECCCCEEEEEEEEECCCCCCEEEEEECCCCCHHHHCCCEE ITTMGAKAIEDRAPSSTAALLQTIPGFVVEASGGEIGNNLFARGIPSAGAYEYVQIQEDG EEECCCHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCCCCCEEEEEEECCC LPVFEDGALQFANADTFYRLDETVSKMEAVRGGSASIFANNAPGGIINFISKTGQNDFQG CCEEECCCEEEECCCCEEEHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCC RAKFTTSDYGMFRTDLNLSGALIQDKLFFNVGGFYRTDNGVRNTGFTANKGGQIKGNITY CEEEEECCCCEEEECCCCCCEEEEEEEEEECCCEEECCCCCCCCCEECCCCCEEEEEEEE KFDDNDYLRINFKHLDDRNTFYLPIPLKSNNGKVEGIPGFNPNYGTLTSVNFSHLNVPQY EECCCCEEEEEEEEECCCCEEEEEEEEECCCCEEEECCCCCCCCCEEEEECCCEECCCCC GGGTFSADLEDGSHPIINSIGAEFKKKISEKVTFKNAFKQTSIDLNYNAIFPNGGPWTQD CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCC AYAADVQNTTAGNLAYTYVDNGAALDPNALIMRADLWHIEKKMSNFANNFSFSFDLDPVK CEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCEEEEECCCEE LTAGYYYSNWKSNQYWNWNSYLVSVSDNPRLLNVKDNTTGVDHTWNGVERITWLERDAQT EEECEEEECCCCCCEEECCEEEEEECCCCEEEEECCCCCCCCCCCCCHHHEEEECCCCHH KGLLNDIYADAEIKATDNLTFNAGLRYNKDKYSGYRDNARFFAENLGILDNNTADDAVTT HHHHHHHHCCCEEEECCCEEEECCCEECCHHCCCCCCCHHHHHHHCCCCCCCCCCCEEEE VKGNPYTYWRYDVSEWSYTAAGNYKFNDNMASYVRYSHGFRSPIEESFYDNAANLSKLEN ECCCCEEEEEEECCCCEEEECCCEEECCCHHHHHHHHCCCCCCHHHHHHCCCCCHHHCCC TEVNQFELGYKYSSSFFSVNANLFHMNLKNVAFTDILSDGSSENKFADVNNIGLEVETNA CCCCEEEECEEECCCEEEEECEEEEEEECCEEEEHHHCCCCCCCCEEECCCCCEEEECCC RYKFAKLNFTFTVQKPEYDNFTGTNADGSTFDFNGNTARRIPKFFCNLRPEVDITKDFTA CEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCEECCCEEE YVQFSYYDKKFTNQDNKQVLPAYKEVGAGLNYTYNNLRFAVDASNLFNEIGLTEGDPRQT EEEEEEECHHHCCCCCCEECCHHHHHCCCCCEEECCEEEEEEHHHHHHHCCCCCCCCCCH TSAASDVFMARPILGRAFRFSVAINF HHHHHHHHHHCHHHCCEEEEEEEEEC >Mature Secondary Structure MFCLFFLPNNLFAQNTAKVSGKVLDDSGVTIPGANVTLKETGKSTVTDENGGYSFSNVEA CEEEEEECCCCCCCCCCCCCCEEECCCCCEECCCCEEEECCCCCCCCCCCCCEEECCCCC GTYTIMATNVGYKTFEKKIALKEGESIEVSLLLEGESQSLKEVVVTGSSAPRSKLESSVA CEEEEEEECCCCHHHHHEEEECCCCEEEEEEEEECCCCCCEEEEEECCCCCHHHHCCCEE ITTMGAKAIEDRAPSSTAALLQTIPGFVVEASGGEIGNNLFARGIPSAGAYEYVQIQEDG EEECCCHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCCCCCEEEEEEECCC LPVFEDGALQFANADTFYRLDETVSKMEAVRGGSASIFANNAPGGIINFISKTGQNDFQG CCEEECCCEEEECCCCEEEHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCC RAKFTTSDYGMFRTDLNLSGALIQDKLFFNVGGFYRTDNGVRNTGFTANKGGQIKGNITY CEEEEECCCCEEEECCCCCCEEEEEEEEEECCCEEECCCCCCCCCEECCCCCEEEEEEEE KFDDNDYLRINFKHLDDRNTFYLPIPLKSNNGKVEGIPGFNPNYGTLTSVNFSHLNVPQY EECCCCEEEEEEEEECCCCEEEEEEEEECCCCEEEECCCCCCCCCEEEEECCCEECCCCC GGGTFSADLEDGSHPIINSIGAEFKKKISEKVTFKNAFKQTSIDLNYNAIFPNGGPWTQD CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCC AYAADVQNTTAGNLAYTYVDNGAALDPNALIMRADLWHIEKKMSNFANNFSFSFDLDPVK CEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCEEEEECCCEE LTAGYYYSNWKSNQYWNWNSYLVSVSDNPRLLNVKDNTTGVDHTWNGVERITWLERDAQT EEECEEEECCCCCCEEECCEEEEEECCCCEEEEECCCCCCCCCCCCCHHHEEEECCCCHH KGLLNDIYADAEIKATDNLTFNAGLRYNKDKYSGYRDNARFFAENLGILDNNTADDAVTT HHHHHHHHCCCEEEECCCEEEECCCEECCHHCCCCCCCHHHHHHHCCCCCCCCCCCEEEE VKGNPYTYWRYDVSEWSYTAAGNYKFNDNMASYVRYSHGFRSPIEESFYDNAANLSKLEN ECCCCEEEEEEECCCCEEEECCCEEECCCHHHHHHHHCCCCCCHHHHHHCCCCCHHHCCC TEVNQFELGYKYSSSFFSVNANLFHMNLKNVAFTDILSDGSSENKFADVNNIGLEVETNA CCCCEEEECEEECCCEEEEECEEEEEEECCEEEEHHHCCCCCCCCEEECCCCCEEEECCC RYKFAKLNFTFTVQKPEYDNFTGTNADGSTFDFNGNTARRIPKFFCNLRPEVDITKDFTA CEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCEECCCEEE YVQFSYYDKKFTNQDNKQVLPAYKEVGAGLNYTYNNLRFAVDASNLFNEIGLTEGDPRQT EEEEEEECHHHCCCCCCEECCHHHHHCCCCCEEECCEEEEEEHHHHHHHCCCCCCCCCCH TSAASDVFMARPILGRAFRFSVAINF HHHHHHHHHHCHHHCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA