| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298939
Identifier: 146298939
GI number: 146298939
Start: 1331497
End: 1332846
Strand: Direct
Name: 146298939
Synonym: Fjoh_1179
Alternate gene names: NA
Gene position: 1331497-1332846 (Clockwise)
Preceding gene: 146298932
Following gene: 146298946
Centisome position: 21.84
GC content: 34.74
Gene sequence:
>1350_bases ATGAAAAAATTTCTCAAAGTACTTTTGCTTGTTGTGGTTCTTGCTTTTTTATATTTTGGATTTACGACTTATCCAAAGCT TGATTTAATTTCAGGTTTCTCTGCCAAAAGTGTTGCGTCTGGGCATTTTATAGATAATCGCCCGTTGGATTTAATTCAGA AAACCGACAATGATATCAATTTGGTTGACTTGGCTAAAAACTCAATTGATGATGCTGGAAAATATGCCATTTCTTCTGTT TATGGGTTAAAAGAAAGAAAAGCGATTTATCGTGAAGGATTAGGAGCGACTTTGATTAATGATGATTTTGATGTTTCAAA ACCGTATCTGCTTCCAAAAAGAACGAAATTAGAAAACAATCTTCCTTTTCCTTATGGAGATAATGAACCAAAAGATACTT CATTTTCTAATGTTGACTATTCGAAACTAAAAAAAGCAGTTGATAATGCTTTTGACAAAACAGGTGGAAGAATTAAAAGA ACTCGCGCTGTTGTAGTTTTATATAAAGATAAATTGATTGCCGAAAAATACGATACAGGTTTTAATAAAGATAGTAAAAT TCTGGGTTGGTCAATGACAAAAAGTATCACAAGTTCAGCTTTCGGAGTTTTGGCGAAACAAGGGAAAATTGATATTTATA AACCTGCTCCAGTTGTAGAATGGAAAAATGATGAGCGTAAAAATATTACGCTTAACGATTTACTTCATATGAATTCTGGT TTAGAATGGGAAGAAAATTATAGCACAATCTGCGACGCAACAAAAATGCTTTTTCAGGCCGAAGATATGGGTAAAGTGCA ATTGGATAAACCAGCACAATTTAAACCCAACACACATTGGAATTATTCGTCGGGAACAACCAATTTATTATCCCTGATTT TAAGAAGACAGTTTAAAACCCAACAAGAATATCTTGATTTTTGGTACAGCGCTGTAATCGATAAAATCGGAATGAACTCG ATGATTGTGGAACAAGATATGTCGGGAACTTTTGTAGGTTCGTCTTACGGGTGGGCAACACCAAGAGACTGGTCAAAATT TGGATTGTTATATCTTCATAAAGGAAACTGGAATGGCGAACAAATTCTTGACGAAAGTTGGGTAAAATATACTGCAACTC CAACAAATACTTCTGATGGAAAATATGGGGCGCAATTTTGGTTAAACGCTGGAGGGAAATTTCCAGATGTTCCTAGAGAT ATGTTTTATTGCAGTGGTTATCAAGGTCAAATGGTGGCGATTATTCCGTCAAAAGATATGGTAATCGTGAGAATGGGAGT AAGAGAAGAAGAACCGGGATTTGATTTTAATGGGTTTTTGAAAGAAGTGATTGCTTCTATTGGGAAATAG
Upstream 100 bases:
>100_bases ATCAATTCTGTTTTCTGAATTATCCGAAACAGATTTATAATTTGGGTTCTAAAATCGTGAACATAAATTATTTATATTGC ATTAAAAATAACTAACTATC
Downstream 100 bases:
>100_bases GTTTAACCGCAATCCCGATAGCTATCGGGATTGCGGTTAAGAATATCTACAAATCAAATCCTAAATTCACGCCCAATTTC GTAGCAATGATTTTAGTAAT
Product: beta-lactamase
Products: NA
Alternate protein names: 6-Aminohexanoate-Dimer Hydrolase; 6-Aminohexanoate-Dimer Hydrolase Protein; Hydrolase Transmembrane Protein; Beta-Lactamase Family Protein; Beta-Lactamase Class C; Beta-Lactamase Class C Family Protein; Hydrolase; Beta-Lactamase Class C Protein; Secreted Beta-Lactamase Family Protein; Amide Hydrolase; Hydrolatse Transmembrane Protein; Membrane Or Secreted Beta-Lactamase Family Protein; Exported 6-Aminohexanoate-Dimer Hydrolase Protein
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MKKFLKVLLLVVVLAFLYFGFTTYPKLDLISGFSAKSVASGHFIDNRPLDLIQKTDNDINLVDLAKNSIDDAGKYAISSV YGLKERKAIYREGLGATLINDDFDVSKPYLLPKRTKLENNLPFPYGDNEPKDTSFSNVDYSKLKKAVDNAFDKTGGRIKR TRAVVVLYKDKLIAEKYDTGFNKDSKILGWSMTKSITSSAFGVLAKQGKIDIYKPAPVVEWKNDERKNITLNDLLHMNSG LEWEENYSTICDATKMLFQAEDMGKVQLDKPAQFKPNTHWNYSSGTTNLLSLILRRQFKTQQEYLDFWYSAVIDKIGMNS MIVEQDMSGTFVGSSYGWATPRDWSKFGLLYLHKGNWNGEQILDESWVKYTATPTNTSDGKYGAQFWLNAGGKFPDVPRD MFYCSGYQGQMVAIIPSKDMVIVRMGVREEEPGFDFNGFLKEVIASIGK
Sequences:
>Translated_449_residues MKKFLKVLLLVVVLAFLYFGFTTYPKLDLISGFSAKSVASGHFIDNRPLDLIQKTDNDINLVDLAKNSIDDAGKYAISSV YGLKERKAIYREGLGATLINDDFDVSKPYLLPKRTKLENNLPFPYGDNEPKDTSFSNVDYSKLKKAVDNAFDKTGGRIKR TRAVVVLYKDKLIAEKYDTGFNKDSKILGWSMTKSITSSAFGVLAKQGKIDIYKPAPVVEWKNDERKNITLNDLLHMNSG LEWEENYSTICDATKMLFQAEDMGKVQLDKPAQFKPNTHWNYSSGTTNLLSLILRRQFKTQQEYLDFWYSAVIDKIGMNS MIVEQDMSGTFVGSSYGWATPRDWSKFGLLYLHKGNWNGEQILDESWVKYTATPTNTSDGKYGAQFWLNAGGKFPDVPRD MFYCSGYQGQMVAIIPSKDMVIVRMGVREEEPGFDFNGFLKEVIASIGK >Mature_449_residues MKKFLKVLLLVVVLAFLYFGFTTYPKLDLISGFSAKSVASGHFIDNRPLDLIQKTDNDINLVDLAKNSIDDAGKYAISSV YGLKERKAIYREGLGATLINDDFDVSKPYLLPKRTKLENNLPFPYGDNEPKDTSFSNVDYSKLKKAVDNAFDKTGGRIKR TRAVVVLYKDKLIAEKYDTGFNKDSKILGWSMTKSITSSAFGVLAKQGKIDIYKPAPVVEWKNDERKNITLNDLLHMNSG LEWEENYSTICDATKMLFQAEDMGKVQLDKPAQFKPNTHWNYSSGTTNLLSLILRRQFKTQQEYLDFWYSAVIDKIGMNS MIVEQDMSGTFVGSSYGWATPRDWSKFGLLYLHKGNWNGEQILDESWVKYTATPTNTSDGKYGAQFWLNAGGKFPDVPRD MFYCSGYQGQMVAIIPSKDMVIVRMGVREEEPGFDFNGFLKEVIASIGK
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50834; Mature: 50834
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFLKVLLLVVVLAFLYFGFTTYPKLDLISGFSAKSVASGHFIDNRPLDLIQKTDNDIN CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHCCCCCCCCCCCHHHHHHCCCCCE LVDLAKNSIDDAGKYAISSVYGLKERKAIYREGLGATLINDDFDVSKPYLLPKRTKLENN EEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHCCC LPFPYGDNEPKDTSFSNVDYSKLKKAVDNAFDKTGGRIKRTRAVVVLYKDKLIAEKYDTG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHHHHHCCC FNKDSKILGWSMTKSITSSAFGVLAKQGKIDIYKPAPVVEWKNDERKNITLNDLLHMNSG CCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHCCC LEWEENYSTICDATKMLFQAEDMGKVQLDKPAQFKPNTHWNYSSGTTNLLSLILRRQFKT CCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QQEYLDFWYSAVIDKIGMNSMIVEQDMSGTFVGSSYGWATPRDWSKFGLLYLHKGNWNGE HHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCHH QILDESWVKYTATPTNTSDGKYGAQFWLNAGGKFPDVPRDMFYCSGYQGQMVAIIPSKDM HHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHEEECCCCCCEEEEECCCCE VIVRMGVREEEPGFDFNGFLKEVIASIGK EEEEECCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKKFLKVLLLVVVLAFLYFGFTTYPKLDLISGFSAKSVASGHFIDNRPLDLIQKTDNDIN CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHCCCCCCCCCCCHHHHHHCCCCCE LVDLAKNSIDDAGKYAISSVYGLKERKAIYREGLGATLINDDFDVSKPYLLPKRTKLENN EEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHCCC LPFPYGDNEPKDTSFSNVDYSKLKKAVDNAFDKTGGRIKRTRAVVVLYKDKLIAEKYDTG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHHHHHCCC FNKDSKILGWSMTKSITSSAFGVLAKQGKIDIYKPAPVVEWKNDERKNITLNDLLHMNSG CCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHCCC LEWEENYSTICDATKMLFQAEDMGKVQLDKPAQFKPNTHWNYSSGTTNLLSLILRRQFKT CCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QQEYLDFWYSAVIDKIGMNSMIVEQDMSGTFVGSSYGWATPRDWSKFGLLYLHKGNWNGE HHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCHH QILDESWVKYTATPTNTSDGKYGAQFWLNAGGKFPDVPRDMFYCSGYQGQMVAIIPSKDM HHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHEEECCCCCCEEEEECCCCE VIVRMGVREEEPGFDFNGFLKEVIASIGK EEEEECCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA