| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298917
Identifier: 146298917
GI number: 146298917
Start: 1306448
End: 1307146
Strand: Direct
Name: 146298917
Synonym: Fjoh_1156
Alternate gene names: NA
Gene position: 1306448-1307146 (Clockwise)
Preceding gene: 146298913
Following gene: 146298921
Centisome position: 21.43
GC content: 35.34
Gene sequence:
>699_bases ATGAAAAGGTATGCAGCATATTTTACTATTATCGCAAGTGTTTTTTCTATAAGTAGTTTTGCCCAGACAAATTATACCAT TATCGATGCAGAAACTAAAAAAACAGCTTCAAAGTTTGATGACAAATCAGATGAAGATCTTATTATTGATTCTTATCTGG TTGTAGAAGTAATCAATATGCCTTTTGGCAAGCGTACAACCAAATACGAAGTATCAAAACTCGATATGGTATATACAAAC GATTTAGGACCAAATAATACCAGAACCGTCACACCAATATACAGAAAGAAAAAAGTAAGATCTGCAGGTGCTGTTCCTCC AAAAGCAATTGCCGATGCCAGTGCCGAGATTCAGCCAGTAGAAGTTGAGGTTACGGCCCCCGCATACACAGAGAAATTCG TTAAGGTAGATATTTTAGACACCTACGCCAATGTTTTAGACAAAGGCTATAAATCTATAGAAATGCTCAAAAAAGTCGCA GACAAGCGTTATTTTGAAAGCGATTACGAAGCCTCAGCAAAATACTATGCTGAATTAATAAGCCTCGATCCAGATTTAGA AGCAGTTTATTACTTTAGATACGTTGAATCTTTAAAAGCAATCAACCAAATGGATAAGGCTAATGAAGCGATGCTTTTAT TTGAAAGTAAAAATATTGGTAATGATGTGATGAAACACAGTAAAGTGGCGAGAAACTAA
Upstream 100 bases:
>100_bases TTTATCGTTTTTCCAGGCAGTTTATAGTTAAAATAAAACATAACTAACACAAAATCAGTAATTTTATATGTTTTTAATGC ATTGTAAAATCTAAATCATC
Downstream 100 bases:
>100_bases ACCAAAATAGTATAAACAAAAAAAGACGATCATTTGATCGTCTTTTTTATTTTTATCTTTCTTAAGCAGGATTAGCTGAT AAAACCAAACTTGTTTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MKRYAAYFTIIASVFSISSFAQTNYTIIDAETKKTASKFDDKSDEDLIIDSYLVVEVINMPFGKRTTKYEVSKLDMVYTN DLGPNNTRTVTPIYRKKKVRSAGAVPPKAIADASAEIQPVEVEVTAPAYTEKFVKVDILDTYANVLDKGYKSIEMLKKVA DKRYFESDYEASAKYYAELISLDPDLEAVYYFRYVESLKAINQMDKANEAMLLFESKNIGNDVMKHSKVARN
Sequences:
>Translated_232_residues MKRYAAYFTIIASVFSISSFAQTNYTIIDAETKKTASKFDDKSDEDLIIDSYLVVEVINMPFGKRTTKYEVSKLDMVYTN DLGPNNTRTVTPIYRKKKVRSAGAVPPKAIADASAEIQPVEVEVTAPAYTEKFVKVDILDTYANVLDKGYKSIEMLKKVA DKRYFESDYEASAKYYAELISLDPDLEAVYYFRYVESLKAINQMDKANEAMLLFESKNIGNDVMKHSKVARN >Mature_232_residues MKRYAAYFTIIASVFSISSFAQTNYTIIDAETKKTASKFDDKSDEDLIIDSYLVVEVINMPFGKRTTKYEVSKLDMVYTN DLGPNNTRTVTPIYRKKKVRSAGAVPPKAIADASAEIQPVEVEVTAPAYTEKFVKVDILDTYANVLDKGYKSIEMLKKVA DKRYFESDYEASAKYYAELISLDPDLEAVYYFRYVESLKAINQMDKANEAMLLFESKNIGNDVMKHSKVARN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26331; Mature: 26331
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYAAYFTIIASVFSISSFAQTNYTIIDAETKKTASKFDDKSDEDLIIDSYLVVEVINM CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCCCEEEHHHHHHHHHHC PFGKRTTKYEVSKLDMVYTNDLGPNNTRTVTPIYRKKKVRSAGAVPPKAIADASAEIQPV CCCCCCCEEEHHHEEEEEECCCCCCCCEEECHHHHHHHHHHCCCCCCHHHHCCCCCCEEE EVEVTAPAYTEKFVKVDILDTYANVLDKGYKSIEMLKKVADKRYFESDYEASAKYYAELI EEEEECCHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH SLDPDLEAVYYFRYVESLKAINQMDKANEAMLLFESKNIGNDVMKHSKVARN HCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCC >Mature Secondary Structure MKRYAAYFTIIASVFSISSFAQTNYTIIDAETKKTASKFDDKSDEDLIIDSYLVVEVINM CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCCCEEEHHHHHHHHHHC PFGKRTTKYEVSKLDMVYTNDLGPNNTRTVTPIYRKKKVRSAGAVPPKAIADASAEIQPV CCCCCCCEEEHHHEEEEEECCCCCCCCEEECHHHHHHHHHHCCCCCCHHHHCCCCCCEEE EVEVTAPAYTEKFVKVDILDTYANVLDKGYKSIEMLKKVADKRYFESDYEASAKYYAELI EEEEECCHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH SLDPDLEAVYYFRYVESLKAINQMDKANEAMLLFESKNIGNDVMKHSKVARN HCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA