| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298913
Identifier: 146298913
GI number: 146298913
Start: 1301344
End: 1302540
Strand: Direct
Name: 146298913
Synonym: Fjoh_1152
Alternate gene names: NA
Gene position: 1301344-1302540 (Clockwise)
Preceding gene: 146298910
Following gene: 146298917
Centisome position: 21.34
GC content: 37.26
Gene sequence:
>1197_bases ATGTATAAAAATACGATGAAATCAGTTTTTGCTGCATCTGCTTTTTTAGTGGGAGTAAGCGGCTGTTTTGCACAAGACAT TTTGGTAAATTCATTAAAGTTAAATGCAAGTGATAAAAGTAAAGAAGCTTTTAAATTTACCGAAGTAGTTAACTTAGGAA CTACATCTGTAAAAAATCAAGGTTCATCTGGAACTTGCTGGAGCTATTCTACAAACTCATTTTTAGAGTCAGAAATGATT CGTTTAGGAAAACAGCCTGTTGAGCTTTCTCAGGTTTTTTCGGCAAGAAACGTGTATGTAGAAAAAGGAATTAACTACGT TCGTATGCACGGAGCTGTTACTTTGGGTGACGGTGGTGCTTTGCATGATGTTACAAACATGTACAAAAAATACGGAGCAG TTCCTAGAGAAGTTTACACAGGATTAAACTACGGAACAGATAAAAATAAATTTGCCGAAATGGCAGCACTTATCGAAGGT GTTTTAGCAGCGGTGGTTAAAAATCCAAACGGAGAATTAACACCAAACTGGCAAAAAGCCTATGCAGCCGTTATTGATTC TTACTTAGGAAAAGTGCCGGAAAACTTTACTTACAAAGGAAAAAACTATACACCACAGTCTTTTGCTAAAGAAGTAGTAG GAATTAATCCAGATGAGTACATCGAAATGTCATCGTTTACAACATCTCCATACTACCAAAAAACAACCATGATGGTGCCG GACAACTGGTCATTTGATCAGGTTTACAACGTAAAAGTAAACGACATGACAGATGTTATTGACAATGCATTGAAAAAAGG ATATACTGTAGCCTGGGCAACAGACGTAAGCGAGAAAAGCTTTAGCTGGAAAAACGGTGTAGCGTATGTGCCAACAAAGA AATTTGACGAAATGACTGCCGAAGAAAAAGCAGATATGTTTAACGGACCAAAAGCAGAACCGGAAATTACTCCAGAAATG CGTCAGGCTGCGTTTGACAACTACACAACTACAGACGACCACGGAATGCACATTATTGGTCTTGCAAAAGATCAAACCGG AAAAGAATATTATATCGTAAAAAATTCTTGGGGAGAAACAAACGACTACAAAGGTTTCTTGTTTGTAACCAAAAATTTCG TAAAATATAAAACTACTGCCTTAATGGTAAACAAAGGCGGAATCCCAACTGATATCGCTAAGAAATTAGGGGTGTAA
Upstream 100 bases:
>100_bases TTAACTGTTAAATAATAGTTTTTTTACCGAATATTTAATTGTTTTGTAACAAAAATATAATAAGGGCGACAAATTAGTCA ACTATTTAAATCTTTATATT
Downstream 100 bases:
>100_bases GTTTAGGCTAGTTTTTAATAAAATAGAAAAGCGCTGTGATCTTTAGATTGCAGCGCTTTTTTGATGTTTTAATTCCATCG AATTCGATGGAATTAAAATA
Product: peptidase C1B, bleomycin hydrolase
Products: NA
Alternate protein names: Aminopeptidase C; Peptidase C1B Bleomycin Hydrolase; Bleomycin Hydrolase; Peptidase C1b Bleomycin Hydrolase; Peptidase C1a Papain; C1 Family Peptidase
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MYKNTMKSVFAASAFLVGVSGCFAQDILVNSLKLNASDKSKEAFKFTEVVNLGTTSVKNQGSSGTCWSYSTNSFLESEMI RLGKQPVELSQVFSARNVYVEKGINYVRMHGAVTLGDGGALHDVTNMYKKYGAVPREVYTGLNYGTDKNKFAEMAALIEG VLAAVVKNPNGELTPNWQKAYAAVIDSYLGKVPENFTYKGKNYTPQSFAKEVVGINPDEYIEMSSFTTSPYYQKTTMMVP DNWSFDQVYNVKVNDMTDVIDNALKKGYTVAWATDVSEKSFSWKNGVAYVPTKKFDEMTAEEKADMFNGPKAEPEITPEM RQAAFDNYTTTDDHGMHIIGLAKDQTGKEYYIVKNSWGETNDYKGFLFVTKNFVKYKTTALMVNKGGIPTDIAKKLGV
Sequences:
>Translated_398_residues MYKNTMKSVFAASAFLVGVSGCFAQDILVNSLKLNASDKSKEAFKFTEVVNLGTTSVKNQGSSGTCWSYSTNSFLESEMI RLGKQPVELSQVFSARNVYVEKGINYVRMHGAVTLGDGGALHDVTNMYKKYGAVPREVYTGLNYGTDKNKFAEMAALIEG VLAAVVKNPNGELTPNWQKAYAAVIDSYLGKVPENFTYKGKNYTPQSFAKEVVGINPDEYIEMSSFTTSPYYQKTTMMVP DNWSFDQVYNVKVNDMTDVIDNALKKGYTVAWATDVSEKSFSWKNGVAYVPTKKFDEMTAEEKADMFNGPKAEPEITPEM RQAAFDNYTTTDDHGMHIIGLAKDQTGKEYYIVKNSWGETNDYKGFLFVTKNFVKYKTTALMVNKGGIPTDIAKKLGV >Mature_398_residues MYKNTMKSVFAASAFLVGVSGCFAQDILVNSLKLNASDKSKEAFKFTEVVNLGTTSVKNQGSSGTCWSYSTNSFLESEMI RLGKQPVELSQVFSARNVYVEKGINYVRMHGAVTLGDGGALHDVTNMYKKYGAVPREVYTGLNYGTDKNKFAEMAALIEG VLAAVVKNPNGELTPNWQKAYAAVIDSYLGKVPENFTYKGKNYTPQSFAKEVVGINPDEYIEMSSFTTSPYYQKTTMMVP DNWSFDQVYNVKVNDMTDVIDNALKKGYTVAWATDVSEKSFSWKNGVAYVPTKKFDEMTAEEKADMFNGPKAEPEITPEM RQAAFDNYTTTDDHGMHIIGLAKDQTGKEYYIVKNSWGETNDYKGFLFVTKNFVKYKTTALMVNKGGIPTDIAKKLGV
Specific function: Unknown
COG id: COG3579
COG function: function code E; Aminopeptidase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44252; Mature: 44252
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00139 THIOL_PROTEASE_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKNTMKSVFAASAFLVGVSGCFAQDILVNSLKLNASDKSKEAFKFTEVVNLGTTSVKNQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCHHCCC GSSGTCWSYSTNSFLESEMIRLGKQPVELSQVFSARNVYVEKGINYVRMHGAVTLGDGGA CCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECEEEECCCCC LHDVTNMYKKYGAVPREVYTGLNYGTDKNKFAEMAALIEGVLAAVVKNPNGELTPNWQKA HHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH YAAVIDSYLGKVPENFTYKGKNYTPQSFAKEVVGINPDEYIEMSSFTTSPYYQKTTMMVP HHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCCHHHEEECCCCCCCCEEEEEEECC DNWSFDQVYNVKVNDMTDVIDNALKKGYTVAWATDVSEKSFSWKNGVAYVPTKKFDEMTA CCCCCCEEEEEEECHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCHHHHHHH EEKADMFNGPKAEPEITPEMRQAAFDNYTTTDDHGMHIIGLAKDQTGKEYYIVKNSWGET HHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCC NDYKGFLFVTKNFVKYKTTALMVNKGGIPTDIAKKLGV CCCCEEEEEECCCHHEEEEEEEEECCCCCHHHHHHHCC >Mature Secondary Structure MYKNTMKSVFAASAFLVGVSGCFAQDILVNSLKLNASDKSKEAFKFTEVVNLGTTSVKNQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCHHCCC GSSGTCWSYSTNSFLESEMIRLGKQPVELSQVFSARNVYVEKGINYVRMHGAVTLGDGGA CCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECEEEECCCCC LHDVTNMYKKYGAVPREVYTGLNYGTDKNKFAEMAALIEGVLAAVVKNPNGELTPNWQKA HHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH YAAVIDSYLGKVPENFTYKGKNYTPQSFAKEVVGINPDEYIEMSSFTTSPYYQKTTMMVP HHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCCHHHEEECCCCCCCCEEEEEEECC DNWSFDQVYNVKVNDMTDVIDNALKKGYTVAWATDVSEKSFSWKNGVAYVPTKKFDEMTA CCCCCCEEEEEEECHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCHHHHHHH EEKADMFNGPKAEPEITPEMRQAAFDNYTTTDDHGMHIIGLAKDQTGKEYYIVKNSWGET HHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCC NDYKGFLFVTKNFVKYKTTALMVNKGGIPTDIAKKLGV CCCCEEEEEECCCHHEEEEEEEEECCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA