| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298908
Identifier: 146298908
GI number: 146298908
Start: 1295813
End: 1297006
Strand: Direct
Name: 146298908
Synonym: Fjoh_1147
Alternate gene names: NA
Gene position: 1295813-1297006 (Clockwise)
Preceding gene: 146298907
Following gene: 146298909
Centisome position: 21.25
GC content: 30.32
Gene sequence:
>1194_bases ATGCAGGATATAGTACTTTCGCTTTTCTTTTTTATAGCTACAATCGTTGGATTTGCTACTTCATTTATGGTTCTTTTTTC AAAGAAAAACTATACTAAGAGTTTTTTCTTAGGACTATTTTTGTTTAGCCTTGCAGTCGTAAGTATTTACAATTTTTATT TGTCGGCACACGATTTTAAAGATTTCCCAGATCTTATCATGATCACAAAATCGTTTATATTTCTTGTTGCCCCGTGCGCA TTTTTGTACGTTCGGAGTGTGTTGTTTCCCTATTCTGCTTTTAAAAATTACGACTGGCTTCATTTCCTGCCATTATTAAT TTATTTCTCGCTTACAATTGTTGTTTGGATTGGAAACTTCACAAACTTTTATTCTGTTGAATACCTTTCTGTAAAAATAA AAAGTCCGTTTTCTATATTCAGCCTGAGTGTGTGGCTTTTATATGCTTTTTGCCAGACCATGATGATTTTAAATTATGAT TTAAAAAAGTTCAAGGAAAATCATTTTCAAAAAATAAAAATTTTAAACTGGATCAGAGTTTATAATTTAATGATTCTGTT TTTGTTTTCTACACTTTTTGTCCACTTCTTTTTAATGAACAAAGTCGACCGCATAGATTATTCCTGTTATGTTTTGATTT CGTCGGTGCTCCTTTTTACGGTATGCTGGCTTTATTTTAAACCGCAGATATTTTATGATCCGCATGAAATTGATGAGTTT AAAATTATAGAAGAAAACTTAGAAATTTTTACATCGAAAGAAACTAAAAATTCACTCCCGATGGTCAAAGAATTAACTCC TGAAAAAAAAGAATTATACCTGTCTAAACTAGAGAGCATATTTGATTCAAAAAAACTCTTTTTAAAGAAAGATCTCGTGA TTCGCGACATTTCAGAAGAAACCGGAATTACCGTAAATAATCTTTCTAATTTAATTAATTCAGAATTTAATTTACATTTT CAGGATTATATAAATCTAAAGCGAATCGAATATTTTAAAGAAAAAATAAACGATGCAGACTGGAAAGATTTATCACTCGA AGGAATGGCATGGGCTTCTGGTTTTAAATCCAGAACAACCTGTTTTAGAGCTTTTATAAAACATACCGGAAAATCTCCTT CAGAATACTTCAAAATAATCAGGATTAGTCCTGAAAAAACAAATTCCTACTTCCTTAAACAATCTACAAACTGA
Upstream 100 bases:
>100_bases TTCTCAAACAAGAAAAAGTGCAGCATTTATAAAAACACCTTATTTTCTTTTGATTTCTTCAAAAGAACAGGATATCTATT TATAATTTAAGATCAAAATT
Downstream 100 bases:
>100_bases AAATAGTTTGTTAAGACTGGTTTTGAAGTGTAATTAATTTTAAAACAGAAACCATGAAAGCGATAATAAAGCAAAGACAA AACCTAAAATCTATATTCCT
Product: response regulator receiver protein
Products: NA
Alternate protein names: Regulatory Helix-Turn-Helix Protein AraC Family; Transcriptional Regulator Arac Family; Response Regulator Receiver Protein
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MQDIVLSLFFFIATIVGFATSFMVLFSKKNYTKSFFLGLFLFSLAVVSIYNFYLSAHDFKDFPDLIMITKSFIFLVAPCA FLYVRSVLFPYSAFKNYDWLHFLPLLIYFSLTIVVWIGNFTNFYSVEYLSVKIKSPFSIFSLSVWLLYAFCQTMMILNYD LKKFKENHFQKIKILNWIRVYNLMILFLFSTLFVHFFLMNKVDRIDYSCYVLISSVLLFTVCWLYFKPQIFYDPHEIDEF KIIEENLEIFTSKETKNSLPMVKELTPEKKELYLSKLESIFDSKKLFLKKDLVIRDISEETGITVNNLSNLINSEFNLHF QDYINLKRIEYFKEKINDADWKDLSLEGMAWASGFKSRTTCFRAFIKHTGKSPSEYFKIIRISPEKTNSYFLKQSTN
Sequences:
>Translated_397_residues MQDIVLSLFFFIATIVGFATSFMVLFSKKNYTKSFFLGLFLFSLAVVSIYNFYLSAHDFKDFPDLIMITKSFIFLVAPCA FLYVRSVLFPYSAFKNYDWLHFLPLLIYFSLTIVVWIGNFTNFYSVEYLSVKIKSPFSIFSLSVWLLYAFCQTMMILNYD LKKFKENHFQKIKILNWIRVYNLMILFLFSTLFVHFFLMNKVDRIDYSCYVLISSVLLFTVCWLYFKPQIFYDPHEIDEF KIIEENLEIFTSKETKNSLPMVKELTPEKKELYLSKLESIFDSKKLFLKKDLVIRDISEETGITVNNLSNLINSEFNLHF QDYINLKRIEYFKEKINDADWKDLSLEGMAWASGFKSRTTCFRAFIKHTGKSPSEYFKIIRISPEKTNSYFLKQSTN >Mature_397_residues MQDIVLSLFFFIATIVGFATSFMVLFSKKNYTKSFFLGLFLFSLAVVSIYNFYLSAHDFKDFPDLIMITKSFIFLVAPCA FLYVRSVLFPYSAFKNYDWLHFLPLLIYFSLTIVVWIGNFTNFYSVEYLSVKIKSPFSIFSLSVWLLYAFCQTMMILNYD LKKFKENHFQKIKILNWIRVYNLMILFLFSTLFVHFFLMNKVDRIDYSCYVLISSVLLFTVCWLYFKPQIFYDPHEIDEF KIIEENLEIFTSKETKNSLPMVKELTPEKKELYLSKLESIFDSKKLFLKKDLVIRDISEETGITVNNLSNLINSEFNLHF QDYINLKRIEYFKEKINDADWKDLSLEGMAWASGFKSRTTCFRAFIKHTGKSPSEYFKIIRISPEKTNSYFLKQSTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47153; Mature: 47153
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDIVLSLFFFIATIVGFATSFMVLFSKKNYTKSFFLGLFLFSLAVVSIYNFYLSAHDFK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DFPDLIMITKSFIFLVAPCAFLYVRSVLFPYSAFKNYDWLHFLPLLIYFSLTIVVWIGNF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC TNFYSVEYLSVKIKSPFSIFSLSVWLLYAFCQTMMILNYDLKKFKENHFQKIKILNWIRV CCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YNLMILFLFSTLFVHFFLMNKVDRIDYSCYVLISSVLLFTVCWLYFKPQIFYDPHEIDEF HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHH KIIEENLEIFTSKETKNSLPMVKELTPEKKELYLSKLESIFDSKKLFLKKDLVIRDISEE HHHHHHHHHEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHH TGITVNNLSNLINSEFNLHFQDYINLKRIEYFKEKINDADWKDLSLEGMAWASGFKSRTT HCEEHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHH CFRAFIKHTGKSPSEYFKIIRISPEKTNSYFLKQSTN HHHHHHHHCCCCHHHHEEEEEECCCCCCCEEEEECCC >Mature Secondary Structure MQDIVLSLFFFIATIVGFATSFMVLFSKKNYTKSFFLGLFLFSLAVVSIYNFYLSAHDFK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DFPDLIMITKSFIFLVAPCAFLYVRSVLFPYSAFKNYDWLHFLPLLIYFSLTIVVWIGNF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC TNFYSVEYLSVKIKSPFSIFSLSVWLLYAFCQTMMILNYDLKKFKENHFQKIKILNWIRV CCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YNLMILFLFSTLFVHFFLMNKVDRIDYSCYVLISSVLLFTVCWLYFKPQIFYDPHEIDEF HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHH KIIEENLEIFTSKETKNSLPMVKELTPEKKELYLSKLESIFDSKKLFLKKDLVIRDISEE HHHHHHHHHEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHH TGITVNNLSNLINSEFNLHFQDYINLKRIEYFKEKINDADWKDLSLEGMAWASGFKSRTT HCEEHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHH CFRAFIKHTGKSPSEYFKIIRISPEKTNSYFLKQSTN HHHHHHHHCCCCHHHHEEEEEECCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA