| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298909
Identifier: 146298909
GI number: 146298909
Start: 1297060
End: 1298034
Strand: Direct
Name: 146298909
Synonym: Fjoh_1148
Alternate gene names: NA
Gene position: 1297060-1298034 (Clockwise)
Preceding gene: 146298908
Following gene: 146298910
Centisome position: 21.27
GC content: 37.95
Gene sequence:
>975_bases ATGAAAGCGATAATAAAGCAAAGACAAAACCTAAAATCTATATTCCTATTATTCTTTTTTTTCGTTTGTTTTCTGGGAAA TGCCCAGCTTAAAGGCGGTCATATTCTGGGGGCGATGGGGCTTCAGTCAGGAACGCAGACACCGGCTAATACACTAAGTG TTTATGTGCCGGGTTATTTATATGATGCATCTTCTTTGCGGGATGCCAACGGAGACAAATCGATTGCAAATCCAGATATA ACCATGTTTTTAACAGGTGCAGGAGCCAATTATGTAAGCGATTTTAAAATTTTAGGAGCCAATTACGGAGCTACAATTTT AGTCGCCTTTGCCTCAAATACAATTCAGGGAAACACAATCGATTCTAAAAACTCGCTTGCTTTTACAGACATGTATGTAC AGCCTTTACAATTGGGCTGGCATAACAAAAGAGCCGATTTTGTTTTCAGCTATCAAATGTATCTTCCAACCGGAAGATTT ACAGCAGGAGCTTCAGATAATGCCGGTTTAGGAATGTTTATAAACGAATTTTCTGCAGGAACAACTTTGTTTTTTAATGA TAAAAAAACGTTTCATTTCTCGGCTTTGGCATCGTATGAAATCAATAGCAAAAAGAAAGATACCGATATAAAAACCGGAG ATATTTTAAGTGTAGAAGGAGGACTTGGGAAAACCTTTTATATGCTTAATGCCGAAAAAACAGCACCAAAATCTATTTTA AATGCGGGGTTAATTTATTATTTCCAATACAAGGTATCTAACGATAAAATTCCGGCGGGCAATTTTGTGCTGGAACCAGA CAAAGACCAAATTGGCGGACTCGGCGCTGAGGTTAATTATCTTCATATTGGCTGTATGACTTCTGCAGGTTTAAGATGGG TTTCAGAATTTGGTGCCGAAAACCGTTTTCAGGGAAGTACTTTTTTCCTCACACTGGCACACGTATTTAGCTTAGCAAAA GAAAAGAAAGGATAA
Upstream 100 bases:
>100_bases GTCCTGAAAAAACAAATTCCTACTTCCTTAAACAATCTACAAACTGAAAATAGTTTGTTAAGACTGGTTTTGAAGTGTAA TTAATTTTAAAACAGAAACC
Downstream 100 bases:
>100_bases GCAAAAATCAGGTTGATGTTTTTTAATGAATACGATAAATTTTAAATTGACTTAAATGAGAAATATACATTCAGATTCTT CTATAAAAAACAGAAAACTT
Product: meta-pathway phenol degradation-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKAIIKQRQNLKSIFLLFFFFVCFLGNAQLKGGHILGAMGLQSGTQTPANTLSVYVPGYLYDASSLRDANGDKSIANPDI TMFLTGAGANYVSDFKILGANYGATILVAFASNTIQGNTIDSKNSLAFTDMYVQPLQLGWHNKRADFVFSYQMYLPTGRF TAGASDNAGLGMFINEFSAGTTLFFNDKKTFHFSALASYEINSKKKDTDIKTGDILSVEGGLGKTFYMLNAEKTAPKSIL NAGLIYYFQYKVSNDKIPAGNFVLEPDKDQIGGLGAEVNYLHIGCMTSAGLRWVSEFGAENRFQGSTFFLTLAHVFSLAK EKKG
Sequences:
>Translated_324_residues MKAIIKQRQNLKSIFLLFFFFVCFLGNAQLKGGHILGAMGLQSGTQTPANTLSVYVPGYLYDASSLRDANGDKSIANPDI TMFLTGAGANYVSDFKILGANYGATILVAFASNTIQGNTIDSKNSLAFTDMYVQPLQLGWHNKRADFVFSYQMYLPTGRF TAGASDNAGLGMFINEFSAGTTLFFNDKKTFHFSALASYEINSKKKDTDIKTGDILSVEGGLGKTFYMLNAEKTAPKSIL NAGLIYYFQYKVSNDKIPAGNFVLEPDKDQIGGLGAEVNYLHIGCMTSAGLRWVSEFGAENRFQGSTFFLTLAHVFSLAK EKKG >Mature_324_residues MKAIIKQRQNLKSIFLLFFFFVCFLGNAQLKGGHILGAMGLQSGTQTPANTLSVYVPGYLYDASSLRDANGDKSIANPDI TMFLTGAGANYVSDFKILGANYGATILVAFASNTIQGNTIDSKNSLAFTDMYVQPLQLGWHNKRADFVFSYQMYLPTGRF TAGASDNAGLGMFINEFSAGTTLFFNDKKTFHFSALASYEINSKKKDTDIKTGDILSVEGGLGKTFYMLNAEKTAPKSIL NAGLIYYFQYKVSNDKIPAGNFVLEPDKDQIGGLGAEVNYLHIGCMTSAGLRWVSEFGAENRFQGSTFFLTLAHVFSLAK EKKG
Specific function: Unknown
COG id: COG4313
COG function: function code C; Protein involved in meta-pathway of phenol degradation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35391; Mature: 35391
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAIIKQRQNLKSIFLLFFFFVCFLGNAQLKGGHILGAMGLQSGTQTPANTLSVYVPGYL CCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCCCCCCCCCCEEEEEECCEE YDASSLRDANGDKSIANPDITMFLTGAGANYVSDFKILGANYGATILVAFASNTIQGNTI ECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCC DSKNSLAFTDMYVQPLQLGWHNKRADFVFSYQMYLPTGRFTAGASDNAGLGMFINEFSAG CCCCCEEEEEEEEEHHHCCCCCCCCCEEEEEEEEECCCCEECCCCCCCCCEEEEECCCCC TTLFFNDKKTFHFSALASYEINSKKKDTDIKTGDILSVEGGLGKTFYMLNAEKTAPKSIL EEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCHHHHH NAGLIYYFQYKVSNDKIPAGNFVLEPDKDQIGGLGAEVNYLHIGCMTSAGLRWVSEFGAE CCCEEEEEEEEECCCCCCCCCEEECCCCHHHCCCCCEEEEEEEEEECHHHHHHHHHHCCC NRFQGSTFFLTLAHVFSLAKEKKG CCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKAIIKQRQNLKSIFLLFFFFVCFLGNAQLKGGHILGAMGLQSGTQTPANTLSVYVPGYL CCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCCCCCCCCCCEEEEEECCEE YDASSLRDANGDKSIANPDITMFLTGAGANYVSDFKILGANYGATILVAFASNTIQGNTI ECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCC DSKNSLAFTDMYVQPLQLGWHNKRADFVFSYQMYLPTGRFTAGASDNAGLGMFINEFSAG CCCCCEEEEEEEEEHHHCCCCCCCCCEEEEEEEEECCCCEECCCCCCCCCEEEEECCCCC TTLFFNDKKTFHFSALASYEINSKKKDTDIKTGDILSVEGGLGKTFYMLNAEKTAPKSIL EEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCHHHHH NAGLIYYFQYKVSNDKIPAGNFVLEPDKDQIGGLGAEVNYLHIGCMTSAGLRWVSEFGAE CCCEEEEEEEEECCCCCCCCCEEECCCCHHHCCCCCEEEEEEEEEECHHHHHHHHHHCCC NRFQGSTFFLTLAHVFSLAKEKKG CCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA