| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is prs [H]
Identifier: 146298887
GI number: 146298887
Start: 1274322
End: 1275263
Strand: Direct
Name: prs [H]
Synonym: Fjoh_1126
Alternate gene names: 146298887
Gene position: 1274322-1275263 (Clockwise)
Preceding gene: 146298885
Following gene: 146298888
Centisome position: 20.9
GC content: 37.05
Gene sequence:
>942_bases ATGTCGCACCTAGAACCAGAAGCTAAAATTTTTGCTTGTTCACAAAGTGTTTATCTTGCAGAAAAAATTGCAGAACAGTA CGGAATTCCGTTAGGAAAAGTAACGATGTCAACGTATAGTGATGGAGAATTTCAGCCGTCTTACGAAGAATCAATTAGAG GTTTACGCGTTTTTATCGTGTGTTCAACTTTTCCATCGGCAGATAATTTGATGGAATTGTTATTAATGATTGATGCAGCA AAACGTGCATCAGCAAGACATATTACAGCTGTTATGCCTTATTTTGGCTGGGCAAGACAGGATAGAAAAGATAAGCCAAG AGTGCCGATTGGAGCTAAGTTAGTAGCAAACCTATTAACAGCTGCAGGAGCAACAAGAATCATGACGATGGATTTGCATG CAGATCAAATTCAGGGATTCTTTGAAAAACCGGTAGATCATTTATTTGCATCTACAATCTTTTTGCCTTACGTGCAGAGT TTAAATTTAGAAAATTTAACGATTGCATCTCCAGACATGGGAGGATCAAAAAGAGCTTATGCTTACTCTAAGTTTTTAGA ATCAGATGTAGTAATCTGTTACAAACAAAGAAAAGCTGCCAATGTTATCGACACTATGGAATTGATTGGTGAAGTAAAAG GTCGTAACGTAATCTTAGTAGATGACATGATCGATACAGGAGGAACTTTAGCGAAAGCTGCAGATCTTATGATCGAAAAA GGAGCGCTAAGTGTAAGAGCAATTTGTACACATGCTATTTTATCTGGCGGTGCGTATGAAAAAATTGAAAATTCAAAATT AACTGAGTTGATCGTAACCGATTCTATTCCGTTAAAGAAACATTCAGACAAGATTAGAGTAGTGAGTTGTGCACCTCTTT TCGCAGAAGTTATGCACATGGTGCACCACAACAATTCCATTAGTGGAAAATTCATTATGTAA
Upstream 100 bases:
>100_bases CACAACTAACTACATCCGAGACATTTATGCGTATTCTGCTTTATCTTAAAAGATATTGCTGGATTTTTATAAGCGTAACG GAATAAAACAACAAATTATA
Downstream 100 bases:
>100_bases AAGCTATAAGCTTAGGCAATAAGCCATAAGCTGGTAGAAATTACAAAAAAAGCCTAAAGCGTATGGCCTAAAGCTTACAA CAATTAAGAATATTTATTTA
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MSHLEPEAKIFACSQSVYLAEKIAEQYGIPLGKVTMSTYSDGEFQPSYEESIRGLRVFIVCSTFPSADNLMELLLMIDAA KRASARHITAVMPYFGWARQDRKDKPRVPIGAKLVANLLTAAGATRIMTMDLHADQIQGFFEKPVDHLFASTIFLPYVQS LNLENLTIASPDMGGSKRAYAYSKFLESDVVICYKQRKAANVIDTMELIGEVKGRNVILVDDMIDTGGTLAKAADLMIEK GALSVRAICTHAILSGGAYEKIENSKLTELIVTDSIPLKKHSDKIRVVSCAPLFAEVMHMVHHNNSISGKFIM
Sequences:
>Translated_313_residues MSHLEPEAKIFACSQSVYLAEKIAEQYGIPLGKVTMSTYSDGEFQPSYEESIRGLRVFIVCSTFPSADNLMELLLMIDAA KRASARHITAVMPYFGWARQDRKDKPRVPIGAKLVANLLTAAGATRIMTMDLHADQIQGFFEKPVDHLFASTIFLPYVQS LNLENLTIASPDMGGSKRAYAYSKFLESDVVICYKQRKAANVIDTMELIGEVKGRNVILVDDMIDTGGTLAKAADLMIEK GALSVRAICTHAILSGGAYEKIENSKLTELIVTDSIPLKKHSDKIRVVSCAPLFAEVMHMVHHNNSISGKFIM >Mature_312_residues SHLEPEAKIFACSQSVYLAEKIAEQYGIPLGKVTMSTYSDGEFQPSYEESIRGLRVFIVCSTFPSADNLMELLLMIDAAK RASARHITAVMPYFGWARQDRKDKPRVPIGAKLVANLLTAAGATRIMTMDLHADQIQGFFEKPVDHLFASTIFLPYVQSL NLENLTIASPDMGGSKRAYAYSKFLESDVVICYKQRKAANVIDTMELIGEVKGRNVILVDDMIDTGGTLAKAADLMIEKG ALSVRAICTHAILSGGAYEKIENSKLTELIVTDSIPLKKHSDKIRVVSCAPLFAEVMHMVHHNNSISGKFIM
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=312, Percent_Identity=47.1153846153846, Blast_Score=268, Evalue=7e-72, Organism=Homo sapiens, GI4506129, Length=312, Percent_Identity=44.5512820512821, Blast_Score=258, Evalue=4e-69, Organism=Homo sapiens, GI28557709, Length=312, Percent_Identity=45.5128205128205, Blast_Score=255, Evalue=4e-68, Organism=Homo sapiens, GI84875539, Length=315, Percent_Identity=44.1269841269841, Blast_Score=253, Evalue=1e-67, Organism=Homo sapiens, GI194018537, Length=337, Percent_Identity=34.4213649851632, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI4506133, Length=335, Percent_Identity=31.6417910447761, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI310128524, Length=135, Percent_Identity=34.0740740740741, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI310115209, Length=135, Percent_Identity=34.0740740740741, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI310118259, Length=135, Percent_Identity=34.0740740740741, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI310119946, Length=135, Percent_Identity=34.0740740740741, Blast_Score=85, Evalue=9e-17, Organism=Escherichia coli, GI1787458, Length=312, Percent_Identity=46.7948717948718, Blast_Score=280, Evalue=7e-77, Organism=Caenorhabditis elegans, GI25149168, Length=312, Percent_Identity=42.6282051282051, Blast_Score=246, Evalue=1e-65, Organism=Caenorhabditis elegans, GI17554702, Length=312, Percent_Identity=42.6282051282051, Blast_Score=245, Evalue=2e-65, Organism=Caenorhabditis elegans, GI71989924, Length=312, Percent_Identity=42.6282051282051, Blast_Score=244, Evalue=4e-65, Organism=Caenorhabditis elegans, GI17554704, Length=308, Percent_Identity=42.5324675324675, Blast_Score=242, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17570245, Length=326, Percent_Identity=31.2883435582822, Blast_Score=156, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6319403, Length=308, Percent_Identity=43.8311688311688, Blast_Score=252, Evalue=6e-68, Organism=Saccharomyces cerevisiae, GI6320946, Length=307, Percent_Identity=42.9967426710098, Blast_Score=251, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6321776, Length=299, Percent_Identity=43.8127090301003, Blast_Score=240, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6322667, Length=195, Percent_Identity=33.3333333333333, Blast_Score=123, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6324511, Length=114, Percent_Identity=31.5789473684211, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI21355239, Length=312, Percent_Identity=45.1923076923077, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI45551540, Length=335, Percent_Identity=42.089552238806, Blast_Score=242, Evalue=2e-64, Organism=Drosophila melanogaster, GI281362873, Length=342, Percent_Identity=30.1169590643275, Blast_Score=154, Evalue=9e-38, Organism=Drosophila melanogaster, GI24651454, Length=342, Percent_Identity=30.1169590643275, Blast_Score=154, Evalue=9e-38, Organism=Drosophila melanogaster, GI24651458, Length=342, Percent_Identity=30.1169590643275, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24651456, Length=342, Percent_Identity=30.1169590643275, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI45552010, Length=361, Percent_Identity=30.1939058171745, Blast_Score=144, Evalue=5e-35, Organism=Drosophila melanogaster, GI24651462, Length=361, Percent_Identity=30.1939058171745, Blast_Score=144, Evalue=5e-35, Organism=Drosophila melanogaster, GI24651464, Length=361, Percent_Identity=30.1939058171745, Blast_Score=144, Evalue=5e-35,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 34510; Mature: 34378
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHLEPEAKIFACSQSVYLAEKIAEQYGIPLGKVTMSTYSDGEFQPSYEESIRGLRVFIV CCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHCCCEEEEEE CSTFPSADNLMELLLMIDAAKRASARHITAVMPYFGWARQDRKDKPRVPIGAKLVANLLT EECCCCHHHHHHHHHHHHHHHHCCHHHHEEHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH AAGATRIMTMDLHADQIQGFFEKPVDHLFASTIFLPYVQSLNLENLTIASPDMGGSKRAY HCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHH AYSKFLESDVVICYKQRKAANVIDTMELIGEVKGRNVILVDDMIDTGGTLAKAADLMIEK HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHC GALSVRAICTHAILSGGAYEKIENSKLTELIVTDSIPLKKHSDKIRVVSCAPLFAEVMHM CCCHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHH VHHNNSISGKFIM HHCCCCCCCCEEC >Mature Secondary Structure SHLEPEAKIFACSQSVYLAEKIAEQYGIPLGKVTMSTYSDGEFQPSYEESIRGLRVFIV CCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHCCCEEEEEE CSTFPSADNLMELLLMIDAAKRASARHITAVMPYFGWARQDRKDKPRVPIGAKLVANLLT EECCCCHHHHHHHHHHHHHHHHCCHHHHEEHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH AAGATRIMTMDLHADQIQGFFEKPVDHLFASTIFLPYVQSLNLENLTIASPDMGGSKRAY HCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHH AYSKFLESDVVICYKQRKAANVIDTMELIGEVKGRNVILVDDMIDTGGTLAKAADLMIEK HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHC GALSVRAICTHAILSGGAYEKIENSKLTELIVTDSIPLKKHSDKIRVVSCAPLFAEVMHM CCCHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHH VHHNNSISGKFIM HHCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12949112 [H]