| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298885
Identifier: 146298885
GI number: 146298885
Start: 1272838
End: 1273302
Strand: Direct
Name: 146298885
Synonym: Fjoh_1124
Alternate gene names: NA
Gene position: 1272838-1273302 (Clockwise)
Preceding gene: 146298884
Following gene: 146298887
Centisome position: 20.88
GC content: 32.9
Gene sequence:
>465_bases ATGGCATTCAAACATTTATTCAAAGCAGTGTTAAACTGGACTTCAAAAAAAGAAGTTTCGTCTTTAAAAATCTATAGTAA GAACCATCAGGTAAAAATTGAAGGAAAACCAATTTTAGAAGTTTCAGCAGCAAAAGCATTCAAAGGAGACCCGGAGTTAT ATAATCCGGAAGATTTATTGTTAAGCAGTTTGGTTTCCTGCCACATGATGTCATATTTATATATATGTTCTCAAAACGGA ATAGAAGTTCTTGAATATTTAGACAACGCAGAAGCAACTTTGGAAGTAAATCCAGACGGAAGCGGGCGTTTTGTTGAGGT AAAATTATTTCCAAAAGTGAAAATCTCAAATTCAGACCAAATAGAATTGGCTTTGAATTTACACTTTAAAGCAAACCAAT TATGTTTTATAGCTAATTCCTGCAATTTTCCTGTTTTGCATGAAGCGAGTTGTGAAGTGTTATAA
Upstream 100 bases:
>100_bases CAGACGATTACTGGTTTAAGGCTAATTTTAATGAAAACATTAATTTTTCGGGTCATTTTTCTTTAAAAAGATAAAATTTA AAAAGAGAAATATTAAGGAG
Downstream 100 bases:
>100_bases AAAAATAAGCTGACTCAGATTGAGAAAGCTTATTAATTTATTGTTGAGATTTATATCTAAATTTATTTATTGAATAGGTT TTCAAATCTTTGCATCATTT
Product: OsmC family protein
Products: NA
Alternate protein names: OsmC-Like Protein; Redox Protein; General Stress O; OsmC/Ohr Family Protein; Osmc Family Protein; OsmC-Like Family; Osmotically Inducible Protein; Truncated Hemoglobin; Conserved Protein; Regulator Of Disulfide Bond Formation; OsmC-Family Protein Like
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MAFKHLFKAVLNWTSKKEVSSLKIYSKNHQVKIEGKPILEVSAAKAFKGDPELYNPEDLLLSSLVSCHMMSYLYICSQNG IEVLEYLDNAEATLEVNPDGSGRFVEVKLFPKVKISNSDQIELALNLHFKANQLCFIANSCNFPVLHEASCEVL
Sequences:
>Translated_154_residues MAFKHLFKAVLNWTSKKEVSSLKIYSKNHQVKIEGKPILEVSAAKAFKGDPELYNPEDLLLSSLVSCHMMSYLYICSQNG IEVLEYLDNAEATLEVNPDGSGRFVEVKLFPKVKISNSDQIELALNLHFKANQLCFIANSCNFPVLHEASCEVL >Mature_153_residues AFKHLFKAVLNWTSKKEVSSLKIYSKNHQVKIEGKPILEVSAAKAFKGDPELYNPEDLLLSSLVSCHMMSYLYICSQNGI EVLEYLDNAEATLEVNPDGSGRFVEVKLFPKVKISNSDQIELALNLHFKANQLCFIANSCNFPVLHEASCEVL
Specific function: Unknown
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17281; Mature: 17150
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFKHLFKAVLNWTSKKEVSSLKIYSKNHQVKIEGKPILEVSAAKAFKGDPELYNPEDLL CCHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCEEEEECCHHCCCCCCCCCHHHHH LSSLVSCHMMSYLYICSQNGIEVLEYLDNAEATLEVNPDGSGRFVEVKLFPKVKISNSDQ HHHHHHHHHHHHHEEECCCCHHHHHHHCCCCEEEEECCCCCCCEEEEEEECEEEECCCCE IELALNLHFKANQLCFIANSCNFPVLHEASCEVL EEEEEEEEECCCEEEEEECCCCCCEEECCCCCCC >Mature Secondary Structure AFKHLFKAVLNWTSKKEVSSLKIYSKNHQVKIEGKPILEVSAAKAFKGDPELYNPEDLL CHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCEEEEECCHHCCCCCCCCCHHHHH LSSLVSCHMMSYLYICSQNGIEVLEYLDNAEATLEVNPDGSGRFVEVKLFPKVKISNSDQ HHHHHHHHHHHHHEEECCCCHHHHHHHCCCCEEEEECCCCCCCEEEEEEECEEEECCCCE IELALNLHFKANQLCFIANSCNFPVLHEASCEVL EEEEEEEEECCCEEEEEECCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA