| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298713
Identifier: 146298713
GI number: 146298713
Start: 1062949
End: 1063407
Strand: Direct
Name: 146298713
Synonym: Fjoh_0951
Alternate gene names: NA
Gene position: 1062949-1063407 (Clockwise)
Preceding gene: 146298712
Following gene: 146298714
Centisome position: 17.43
GC content: 27.02
Gene sequence:
>459_bases ATGGCAGACACTTACTCTCAACTGTACATTCAAATTGTTTTCGCTGTAAAAGGAAGGCAGAATTTAATCTCTAAAAAATG GAAAGATGAAATTTACAAATACATTACAGGAATTATTACCAATCAGAAACAAAAATTGATTGCAATTAACGGAATGCCAG ATCATATTCATATCTTAGTTGGAATAAAACCAAATATTTCATTATCTGATTTAGTAAGAGATATTAAATCAAGTTCATCT AAATTCATCAATGAACAAAAATGGATTAATGGAAAATTTGAATGGCAGAATGGTTTTGGTGCTTTTTCATATGGGCATTC GCAATTGACTAATGTCATAAAATATATCGAAAATCAAGAAGAGCATCATAAAACCAAAACATTCAAGGAAGAATATATCG CATTTCTAAAATTATTCAATATTGATTTTAAAGATGAATATATTTTTAAAGAATTTTGA
Upstream 100 bases:
>100_bases GCCCCAGAGGGGCGACATATTCTTTACCATAAAAAACAATACTTATCTTACAAAATTAAAATTATTAATTAGCTTTACCT TTTGTAATTTTAATTAAAAC
Downstream 100 bases:
>100_bases TTTTATGCCGCTCCGCTGGAGCTTTAGATTTCATTTGGTTATTTTAATTGTTAGAAAATATTTTGCTTATCCGAAGCATT TTTCAAATAAAATATGGCTT
Product: transposase IS200-family protein
Products: NA
Alternate protein names: Transposase IS
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MADTYSQLYIQIVFAVKGRQNLISKKWKDEIYKYITGIITNQKQKLIAINGMPDHIHILVGIKPNISLSDLVRDIKSSSS KFINEQKWINGKFEWQNGFGAFSYGHSQLTNVIKYIENQEEHHKTKTFKEEYIAFLKLFNIDFKDEYIFKEF
Sequences:
>Translated_152_residues MADTYSQLYIQIVFAVKGRQNLISKKWKDEIYKYITGIITNQKQKLIAINGMPDHIHILVGIKPNISLSDLVRDIKSSSS KFINEQKWINGKFEWQNGFGAFSYGHSQLTNVIKYIENQEEHHKTKTFKEEYIAFLKLFNIDFKDEYIFKEF >Mature_151_residues ADTYSQLYIQIVFAVKGRQNLISKKWKDEIYKYITGIITNQKQKLIAINGMPDHIHILVGIKPNISLSDLVRDIKSSSSK FINEQKWINGKFEWQNGFGAFSYGHSQLTNVIKYIENQEEHHKTKTFKEEYIAFLKLFNIDFKDEYIFKEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17962; Mature: 17831
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTYSQLYIQIVFAVKGRQNLISKKWKDEIYKYITGIITNQKQKLIAINGMPDHIHILV CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEE GIKPNISLSDLVRDIKSSSSKFINEQKWINGKFEWQNGFGAFSYGHSQLTNVIKYIENQE ECCCCCCHHHHHHHHHHHHHHHHCHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCH EHHKTKTFKEEYIAFLKLFNIDFKDEYIFKEF HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure ADTYSQLYIQIVFAVKGRQNLISKKWKDEIYKYITGIITNQKQKLIAINGMPDHIHILV CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEE GIKPNISLSDLVRDIKSSSSKFINEQKWINGKFEWQNGFGAFSYGHSQLTNVIKYIENQE ECCCCCCHHHHHHHHHHHHHHHHCHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCH EHHKTKTFKEEYIAFLKLFNIDFKDEYIFKEF HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA