| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298685
Identifier: 146298685
GI number: 146298685
Start: 1036977
End: 1037627
Strand: Direct
Name: 146298685
Synonym: Fjoh_0923
Alternate gene names: NA
Gene position: 1036977-1037627 (Clockwise)
Preceding gene: 146298684
Following gene: 146298693
Centisome position: 17.01
GC content: 27.5
Gene sequence:
>651_bases ATGGAAAAAAGTAGATTTGAACATAATTTCATAGAAAAATTGAATAAAAATTATCCAAAATTTTCTAAATATTTCGAATT TAGATTAGAAGTATTTTGTGAATTCAATACTCTAATTTATGAGATAAATAAATGTTTAATTCTTGAACTTGATAGAGCAG CCATTACCCTAACAAATCATATGTTAGAGCGTCTTTTAAAACTTACATTGATTTATAATGATGTTGGAATAGGGCCAATA GAAATTGATAAATGGTCAGAAGCTTTTGAAGAACCCAATACAAATTTTGGAACTATTGATTTGGGTAATTCAATTGAACG ATGCAAGAAATTTGGACTGATTTCAGATACTGAAAAAATATATTTGTTTGATACTATTCGTGTATTAATGAGAAATGGAT TTTCGCATGCTGATTCAAGTAATATACTTGCCAGTTTACCTGATGAAACAATAATGTTTCAAGGAAGTCTCCTTAATCCA AATGCAGGATTAAAAGAAGTTTCCATAAATCAAAAAATTATGCCGACTTTCCAAGCTTTACAAATGGAAGATTTTGCTAA AAACAGTTCTCATCCTTACTTTGATTTTGTCTTCAATTTAATATTTAAAATTGAAAACCGACTAAAAGATAAGTTCCAAA CTACAGAATAA
Upstream 100 bases:
>100_bases GAACGCATAAATTAGAAATATTAAAAATCCATTACTAGGTGTTTTTTTTTATTTAAACCTTCTTCATGTATTTTAATATC TTAGTATAAAGAAAACAAAC
Downstream 100 bases:
>100_bases CTATCTTATTTTAAAAATTTGCTAAATATGGATTGGAATGTTTACCCTCAAAATATACCTCATACTTCAAGGACATATCT TGTCTCAATAAAAAGACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MEKSRFEHNFIEKLNKNYPKFSKYFEFRLEVFCEFNTLIYEINKCLILELDRAAITLTNHMLERLLKLTLIYNDVGIGPI EIDKWSEAFEEPNTNFGTIDLGNSIERCKKFGLISDTEKIYLFDTIRVLMRNGFSHADSSNILASLPDETIMFQGSLLNP NAGLKEVSINQKIMPTFQALQMEDFAKNSSHPYFDFVFNLIFKIENRLKDKFQTTE
Sequences:
>Translated_216_residues MEKSRFEHNFIEKLNKNYPKFSKYFEFRLEVFCEFNTLIYEINKCLILELDRAAITLTNHMLERLLKLTLIYNDVGIGPI EIDKWSEAFEEPNTNFGTIDLGNSIERCKKFGLISDTEKIYLFDTIRVLMRNGFSHADSSNILASLPDETIMFQGSLLNP NAGLKEVSINQKIMPTFQALQMEDFAKNSSHPYFDFVFNLIFKIENRLKDKFQTTE >Mature_216_residues MEKSRFEHNFIEKLNKNYPKFSKYFEFRLEVFCEFNTLIYEINKCLILELDRAAITLTNHMLERLLKLTLIYNDVGIGPI EIDKWSEAFEEPNTNFGTIDLGNSIERCKKFGLISDTEKIYLFDTIRVLMRNGFSHADSSNILASLPDETIMFQGSLLNP NAGLKEVSINQKIMPTFQALQMEDFAKNSSHPYFDFVFNLIFKIENRLKDKFQTTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25268; Mature: 25268
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKSRFEHNFIEKLNKNYPKFSKYFEFRLEVFCEFNTLIYEINKCLILELDRAAITLTNH CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHH MLERLLKLTLIYNDVGIGPIEIDKWSEAFEEPNTNFGTIDLGNSIERCKKFGLISDTEKI HHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCCCEEECCCHHHHHHHCCCCCCCCEE YLFDTIRVLMRNGFSHADSSNILASLPDETIMFQGSLLNPNAGLKEVSINQKIMPTFQAL EHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCEECCCCCCEEECCCCHHHHHHHHH QMEDFAKNSSHPYFDFVFNLIFKIENRLKDKFQTTE HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEKSRFEHNFIEKLNKNYPKFSKYFEFRLEVFCEFNTLIYEINKCLILELDRAAITLTNH CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHH MLERLLKLTLIYNDVGIGPIEIDKWSEAFEEPNTNFGTIDLGNSIERCKKFGLISDTEKI HHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCCCEEECCCHHHHHHHCCCCCCCCEE YLFDTIRVLMRNGFSHADSSNILASLPDETIMFQGSLLNPNAGLKEVSINQKIMPTFQAL EHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCEECCCCCCEEECCCCHHHHHHHHH QMEDFAKNSSHPYFDFVFNLIFKIENRLKDKFQTTE HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA