| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298684
Identifier: 146298684
GI number: 146298684
Start: 1035894
End: 1036646
Strand: Direct
Name: 146298684
Synonym: Fjoh_0922
Alternate gene names: NA
Gene position: 1035894-1036646 (Clockwise)
Preceding gene: 146298683
Following gene: 146298685
Centisome position: 16.99
GC content: 32.67
Gene sequence:
>753_bases ATGCCGCGTAAAAATGATGATAAAGGCAAAAAACGTTTAGTTCCAATTGAGCCAGCATCTGAGCATTCACGTTTATTGCC AAAAGATAATTCAAGCGTTAGTAAATTATATTGGTCATTTGGTTTTAAATTCTATAAGCAGATAGATAAATTTGGTTTTA GCAATATTAGAATGGAATGGTTTTCATCAGTATTGGAAAGACTGCGACAAACCTCTAAAATGGAATACACAGGAATGTCA GAAGTTCTTGAAGGTGGCTATAGGTATCATATAATAAATTGGGAATCAAAGAAATGCCCACTTACCAGAACGGAATTTGA CTGGATAGATCCGGTTTACTTAAAGAATGAAATTGAATATCCTTTTTGTCAATTCCATATATCCAAGGCTACAGGACGAA TAATTGGTTTCTGGGATGAAAATAATGTTTTTCAGATAATATTACTTGATCCATTACATAATTTACAGCCCTCAGCTAAA GTACAATATGAGATAAGAGACACTTTTCCAGTCATGAGTGAGTATGATTCATTGTGGTTAGATTTACATAACATAATGGA TAAATCCTGCAACCATGACGATTGTTCAACATTGAAGCAATTACGAGATTTGCCAACTGGAATTACTAATTCTAACATCA TAATGGCACACCTTGATGATTCTTATTTTGAAGAATATTCCAAAATTTCTAAAGGAAAGACTATTAGGCAAATTTTAGAA GCTGGAATATTACATTATAGTGAAAATCCGTGA
Upstream 100 bases:
>100_bases CATGGATAAATGCTAGAAAGGGATTCAAACCCTCAGAAAGATGTGAAGTTGAGTTAGATGAAAAAATCATGGAATCATAT TTTAAATCTCGATTAAATTA
Downstream 100 bases:
>100_bases TTACATCTAAAATTTTCTATTATGAAAAATAAACTAATTTCATTACTACAAAAATTACTTATGGAAACAAACCATATAGA TATGATTGGTATAAAAGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MPRKNDDKGKKRLVPIEPASEHSRLLPKDNSSVSKLYWSFGFKFYKQIDKFGFSNIRMEWFSSVLERLRQTSKMEYTGMS EVLEGGYRYHIINWESKKCPLTRTEFDWIDPVYLKNEIEYPFCQFHISKATGRIIGFWDENNVFQIILLDPLHNLQPSAK VQYEIRDTFPVMSEYDSLWLDLHNIMDKSCNHDDCSTLKQLRDLPTGITNSNIIMAHLDDSYFEEYSKISKGKTIRQILE AGILHYSENP
Sequences:
>Translated_250_residues MPRKNDDKGKKRLVPIEPASEHSRLLPKDNSSVSKLYWSFGFKFYKQIDKFGFSNIRMEWFSSVLERLRQTSKMEYTGMS EVLEGGYRYHIINWESKKCPLTRTEFDWIDPVYLKNEIEYPFCQFHISKATGRIIGFWDENNVFQIILLDPLHNLQPSAK VQYEIRDTFPVMSEYDSLWLDLHNIMDKSCNHDDCSTLKQLRDLPTGITNSNIIMAHLDDSYFEEYSKISKGKTIRQILE AGILHYSENP >Mature_249_residues PRKNDDKGKKRLVPIEPASEHSRLLPKDNSSVSKLYWSFGFKFYKQIDKFGFSNIRMEWFSSVLERLRQTSKMEYTGMSE VLEGGYRYHIINWESKKCPLTRTEFDWIDPVYLKNEIEYPFCQFHISKATGRIIGFWDENNVFQIILLDPLHNLQPSAKV QYEIRDTFPVMSEYDSLWLDLHNIMDKSCNHDDCSTLKQLRDLPTGITNSNIIMAHLDDSYFEEYSKISKGKTIRQILEA GILHYSENP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29483; Mature: 29352
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKNDDKGKKRLVPIEPASEHSRLLPKDNSSVSKLYWSFGFKFYKQIDKFGFSNIRMEW CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH FSSVLERLRQTSKMEYTGMSEVLEGGYRYHIINWESKKCPLTRTEFDWIDPVYLKNEIEY HHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCC PFCQFHISKATGRIIGFWDENNVFQIILLDPLHNLQPSAKVQYEIRDTFPVMSEYDSLWL CCEEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHH DLHNIMDKSCNHDDCSTLKQLRDLPTGITNSNIIMAHLDDSYFEEYSKISKGKTIRQILE HHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHH AGILHYSENP HHHHHCCCCC >Mature Secondary Structure PRKNDDKGKKRLVPIEPASEHSRLLPKDNSSVSKLYWSFGFKFYKQIDKFGFSNIRMEW CCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH FSSVLERLRQTSKMEYTGMSEVLEGGYRYHIINWESKKCPLTRTEFDWIDPVYLKNEIEY HHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCC PFCQFHISKATGRIIGFWDENNVFQIILLDPLHNLQPSAKVQYEIRDTFPVMSEYDSLWL CCEEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHH DLHNIMDKSCNHDDCSTLKQLRDLPTGITNSNIIMAHLDDSYFEEYSKISKGKTIRQILE HHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHH AGILHYSENP HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA