| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298682
Identifier: 146298682
GI number: 146298682
Start: 1034305
End: 1035342
Strand: Direct
Name: 146298682
Synonym: Fjoh_0920
Alternate gene names: NA
Gene position: 1034305-1035342 (Clockwise)
Preceding gene: 146298680
Following gene: 146298683
Centisome position: 16.96
GC content: 29.19
Gene sequence:
>1038_bases ATGACATATTTCAATACCGTAGCAATGGAAATACAAGATATATGTATTGCTAATGATTTTGATTTTGTGCACATTTCTGA TGCAATGGGATGGACTACTTCCAATTTAACAGCAATTGAAAAACTGAATAAAAAAGAAATTGGAAACATTTGTAGTGTTT TACAAAAAAGAGAATTGATCGAATATTTAATTTCATTTCAAAAAAATTATAACGAATCAAAGAAGAAAGCATTAGTAGAC TACAAAGAAAATATAAGTATATACAAAAAGGTTAAAAGAATAGATGGCTTACTAAAAGGAGAGTTTACTTCAAGTATTGA TCTTTTGGGCGATATTTCGGACTTTTTGGGCATAGAAAATGAAAAAAATATATTTGAAGAAGTTCAGAAAAATATCGCCT TATATAGAATTTCTAATTTTGTACCAGACAATCTAAACCTATATGCTTGGTTAAAAAGAGGCGAATTAGACTTTTATAAA CTAGATTTGCCGGATTATAGTGAAGAATTATTTTTGGATTGGATTAATTCAAATGTTTGGAAAAAACAATTAAGTAATGC AAATTACTTTTTAAGTATACCAAATATATTAAGAGAGTTTGGTGTTGGTCTTGTTTATACACCTTATTTGGAAAAAACAG TACACGGTGCGGTAAGATGGTTTGACGGAAAACCTTTAGTTCAAATATCTGACAAAGGAAAGTGTTTAGCTACTGCATGG TATACATTATTCCATGAATTTGGGCATGTCATTAAGCATAGAAATGATGAAATTTTTGAAGGAAATTTAGATCTTCCGAA ATCTAAAATAAATAAAAAGGAACAAGAGGCTAATTCTTTTGCATACGAATATCTGTTCAATGGGGATGGATTAAGGAAAT GGTTATTCGGACAAAGAAACCAGTTTGTAGATTACTCATTTGTAGATAATACAGCCGCTAAATTTAATGTGCCAAAAATA TTTGTTGCCTACTGGATGAAAAAAGCATTCATAAAAACGAAAGCTGTGAATGATAATTTACCGAATGTATCATTTTAA
Upstream 100 bases:
>100_bases GACAATTTGATCAAATATCTAAGATATATGTTCATGATGTTAACAAACATGATTACAAAAAGTGATGGAAATAATGAATA AAGTAGAGGTGCTAAACCCT
Downstream 100 bases:
>100_bases GAATTAGTTATTTAATATATAAGGAAAGTTAAATGAAAAAAGTCATATTAACTAAAAATTGATTTTAAAAAATATACTAC TATGATAACTATACATCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Plasmid Maintenance System Antidote Protein; Plasmid Maintenance System Antidote Protein XRE Family; Plasmid Maintenance System Antidote Protein Xre Family
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MTYFNTVAMEIQDICIANDFDFVHISDAMGWTTSNLTAIEKLNKKEIGNICSVLQKRELIEYLISFQKNYNESKKKALVD YKENISIYKKVKRIDGLLKGEFTSSIDLLGDISDFLGIENEKNIFEEVQKNIALYRISNFVPDNLNLYAWLKRGELDFYK LDLPDYSEELFLDWINSNVWKKQLSNANYFLSIPNILREFGVGLVYTPYLEKTVHGAVRWFDGKPLVQISDKGKCLATAW YTLFHEFGHVIKHRNDEIFEGNLDLPKSKINKKEQEANSFAYEYLFNGDGLRKWLFGQRNQFVDYSFVDNTAAKFNVPKI FVAYWMKKAFIKTKAVNDNLPNVSF
Sequences:
>Translated_345_residues MTYFNTVAMEIQDICIANDFDFVHISDAMGWTTSNLTAIEKLNKKEIGNICSVLQKRELIEYLISFQKNYNESKKKALVD YKENISIYKKVKRIDGLLKGEFTSSIDLLGDISDFLGIENEKNIFEEVQKNIALYRISNFVPDNLNLYAWLKRGELDFYK LDLPDYSEELFLDWINSNVWKKQLSNANYFLSIPNILREFGVGLVYTPYLEKTVHGAVRWFDGKPLVQISDKGKCLATAW YTLFHEFGHVIKHRNDEIFEGNLDLPKSKINKKEQEANSFAYEYLFNGDGLRKWLFGQRNQFVDYSFVDNTAAKFNVPKI FVAYWMKKAFIKTKAVNDNLPNVSF >Mature_344_residues TYFNTVAMEIQDICIANDFDFVHISDAMGWTTSNLTAIEKLNKKEIGNICSVLQKRELIEYLISFQKNYNESKKKALVDY KENISIYKKVKRIDGLLKGEFTSSIDLLGDISDFLGIENEKNIFEEVQKNIALYRISNFVPDNLNLYAWLKRGELDFYKL DLPDYSEELFLDWINSNVWKKQLSNANYFLSIPNILREFGVGLVYTPYLEKTVHGAVRWFDGKPLVQISDKGKCLATAWY TLFHEFGHVIKHRNDEIFEGNLDLPKSKINKKEQEANSFAYEYLFNGDGLRKWLFGQRNQFVDYSFVDNTAAKFNVPKIF VAYWMKKAFIKTKAVNDNLPNVSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40230; Mature: 40099
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYFNTVAMEIQDICIANDFDFVHISDAMGWTTSNLTAIEKLNKKEIGNICSVLQKRELI CCCHHHHHHHHHHHHEECCCCEEEECCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHH EYLISFQKNYNESKKKALVDYKENISIYKKVKRIDGLLKGEFTSSIDLLGDISDFLGIEN HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC EKNIFEEVQKNIALYRISNFVPDNLNLYAWLKRGELDFYKLDLPDYSEELFLDWINSNVW CHHHHHHHHHHHEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHCCHHH KKQLSNANYFLSIPNILREFGVGLVYTPYLEKTVHGAVRWFDGKPLVQISDKGKCLATAW HHHHCCCCEEEECHHHHHHHCCCEEECHHHHHHHHHHHEEECCCEEEEECCCCCCHHHHH YTLFHEFGHVIKHRNDEIFEGNLDLPKSKINKKEQEANSFAYEYLFNGDGLRKWLFGQRN HHHHHHHHHHHHCCCCCEEECCCCCCHHHHCHHHHHHHHHHHHEEECCCCHHHHHCCCCC QFVDYSFVDNTAAKFNVPKIFVAYWMKKAFIKTKAVNDNLPNVSF CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TYFNTVAMEIQDICIANDFDFVHISDAMGWTTSNLTAIEKLNKKEIGNICSVLQKRELI CCHHHHHHHHHHHHEECCCCEEEECCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHH EYLISFQKNYNESKKKALVDYKENISIYKKVKRIDGLLKGEFTSSIDLLGDISDFLGIEN HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC EKNIFEEVQKNIALYRISNFVPDNLNLYAWLKRGELDFYKLDLPDYSEELFLDWINSNVW CHHHHHHHHHHHEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHCCHHH KKQLSNANYFLSIPNILREFGVGLVYTPYLEKTVHGAVRWFDGKPLVQISDKGKCLATAW HHHHCCCCEEEECHHHHHHHCCCEEECHHHHHHHHHHHEEECCCEEEEECCCCCCHHHHH YTLFHEFGHVIKHRNDEIFEGNLDLPKSKINKKEQEANSFAYEYLFNGDGLRKWLFGQRN HHHHHHHHHHHHCCCCCEEECCCCCCHHHHCHHHHHHHHHHHHEEECCCCHHHHHCCCCC QFVDYSFVDNTAAKFNVPKIFVAYWMKKAFIKTKAVNDNLPNVSF CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA