Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146298683

Identifier: 146298683

GI number: 146298683

Start: 1035424

End: 1035894

Strand: Direct

Name: 146298683

Synonym: Fjoh_0921

Alternate gene names: NA

Gene position: 1035424-1035894 (Clockwise)

Preceding gene: 146298682

Following gene: 146298684

Centisome position: 16.98

GC content: 32.06

Gene sequence:

>471_bases
ATGATAACTATACATCAAGCCTGTGACTATATAATTTTCAGATTAAAAAGTGAAGAAAGTGGTTCTTTAAATCATTTAAA
ACTTCAAAAGCTATTATACTATGTTCAATCATGGCATCTTGCTTTTTATGGCACTCGTTTTTTCGATGGTAAGTTTCAAG
CATGGATTCATGGTCCAGTTAACAGAGCCATATATGATAGATTTAAAGATACTAAATATATGTATTCCACAATTGATTTA
GACGATCTTTCAGACACTGAAATTACTACAAAATTACCGCTCGAAGTGAAAGAGCACATAGACGTTGTTTTAGAAACGTA
TGCTGGCTTTTCAGATACAGATCTTGAAAGCAAAACACATCAGGAAGAGCCATGGATAAATGCTAGAAAGGGATTCAAAC
CCTCAGAAAGATGTGAAGTTGAGTTAGATGAAAAAATCATGGAATCATATTTTAAATCTCGATTAAATTAA

Upstream 100 bases:

>100_bases
ACCGAATGTATCATTTTAAGAATTAGTTATTTAATATATAAGGAAAGTTAAATGAAAAAAGTCATATTAACTAAAAATTG
ATTTTAAAAAATATACTACT

Downstream 100 bases:

>100_bases
TGCCGCGTAAAAATGATGATAAAGGCAAAAAACGTTTAGTTCCAATTGAGCCAGCATCTGAGCATTCACGTTTATTGCCA
AAAGATAATTCAAGCGTTAG

Product: phage-associated protein

Products: NA

Alternate protein names: Prophage Protein; Prophage Ps3 Protein; Xin-Antitoxin System Antitoxin Component Xre Family; Phage-Associated Protein-Like Protein; CPW-WPC Domain Protein; Phage-Associated Protein Family Protein

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MITIHQACDYIIFRLKSEESGSLNHLKLQKLLYYVQSWHLAFYGTRFFDGKFQAWIHGPVNRAIYDRFKDTKYMYSTIDL
DDLSDTEITTKLPLEVKEHIDVVLETYAGFSDTDLESKTHQEEPWINARKGFKPSERCEVELDEKIMESYFKSRLN

Sequences:

>Translated_156_residues
MITIHQACDYIIFRLKSEESGSLNHLKLQKLLYYVQSWHLAFYGTRFFDGKFQAWIHGPVNRAIYDRFKDTKYMYSTIDL
DDLSDTEITTKLPLEVKEHIDVVLETYAGFSDTDLESKTHQEEPWINARKGFKPSERCEVELDEKIMESYFKSRLN
>Mature_156_residues
MITIHQACDYIIFRLKSEESGSLNHLKLQKLLYYVQSWHLAFYGTRFFDGKFQAWIHGPVNRAIYDRFKDTKYMYSTIDL
DDLSDTEITTKLPLEVKEHIDVVLETYAGFSDTDLESKTHQEEPWINARKGFKPSERCEVELDEKIMESYFKSRLN

Specific function: Unknown

COG id: COG3600

COG function: function code S; Uncharacterized phage-associated protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18501; Mature: 18501

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITIHQACDYIIFRLKSEESGSLNHLKLQKLLYYVQSWHLAFYGTRFFDGKFQAWIHGPV
CEEHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEECCH
NRAIYDRFKDTKYMYSTIDLDDLSDTEITTKLPLEVKEHIDVVLETYAGFSDTDLESKTH
HHHHHHHHCCCEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC
QEEPWINARKGFKPSERCEVELDEKIMESYFKSRLN
CCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MITIHQACDYIIFRLKSEESGSLNHLKLQKLLYYVQSWHLAFYGTRFFDGKFQAWIHGPV
CEEHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEECCH
NRAIYDRFKDTKYMYSTIDLDDLSDTEITTKLPLEVKEHIDVVLETYAGFSDTDLESKTH
HHHHHHHHCCCEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC
QEEPWINARKGFKPSERCEVELDEKIMESYFKSRLN
CCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA