| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298595
Identifier: 146298595
GI number: 146298595
Start: 945432
End: 947234
Strand: Direct
Name: 146298595
Synonym: Fjoh_0833
Alternate gene names: NA
Gene position: 945432-947234 (Clockwise)
Preceding gene: 146298591
Following gene: 146298602
Centisome position: 15.51
GC content: 34.66
Gene sequence:
>1803_bases ATGGGTTTAGTTACCGCGAAAGAAGTTGCAAAGGCAATAAATGTTGAAAAGTACGGAGTCCTCGGTACGTTTTCTGGCTG GATTCTTATGAAGGTTCTTAAGATCTCGACCCTCAATAAAATTTACGATCATAATAAGCATTTAGAGGATGTTGCATTTT TAAATGGAATTTTGGATGAGATGGAGATTAAATTCGAAATCCCGGAAGAAGATTTAAAACGTCTGCCAAAAGAAGGTCCG TACATTACCATTTCAAATCATCCGCTTGGAGGAATTGATGGGATTTTGCTATTGAAGTTAATGCTTGAAAGAGAGCCTAA TTTCAAAATCATTGCCAATTTCTTATTACACAGAATTGTTCCGCTAAAAAAATACATTATGCCGGTTAATCCTTTTGAGA ACCATAAGGATGCCAAATCGAGCGTAGTGGGTATTAAAGAAACTTTACGTCATTTAAGTGACGGAAAACCGCTTGGAATT TTCCCTGCTGGAGAAGTTTCAACTTATAAAGACGGGAAATTAGTAGTAGACAAACCTTGGGAAGAGGGCGCTCTGAAATT AATCAGAAAAGCTAAAGTTCCGGTTGTTCCAATTTATTTTCATGCCAAAAACAGTAAATTATTCTATTGGCTTTCTAAAA TAGACGATACTTTACGTACTGCTAAATTACCTTCTGAGCTTTTAACGCAGAAAGATCGTGTAATTAAAGTTCGTATTGGA AAACCAATTTCTGTAAGCGAACAAAACGAAATAGAATCGTTTGAAGAATATTCAGAGTTTTTAAGAAGAAAAACTTATAT GCTGGCTAATCCATTTGAGAAAGACACCAAATTGATTGACACAGCTAGCTTAAAAATTCCAAAAGCACCAAAAAAGATTG TAACTCCGGCGAATGAATCTAAAATGCTTGATGAAGTTCAGGCGCTAAGAGACAGCGACTGCCGATTTTTACAAAGTAAA AATTACGAAGTATTCTTTGCGAGAGCAAAATCAATTCCGAATATTTTACATGAAATTGGACGTCTTCGTGAAATTACTTT CCGTGAAGTTGGCGAAGGAACCAATGAATCTATAGATATTGACCAATACGATCAATATTATCACCATATGTTTTTATGGG ATGATGACACCAAGAAAATTGCAGGTGCTTACCGTATGGGATTAGGTTCTGAGATTTATCCAAAATACGGTATTGAAGGT TTTTACCTGACAGATCTTTTTAGATTTGAACCGGAACTTCATGATATGATGCACAAGTCAATTGAAATGGGGCGTGCGTT TATTACTCGCGAATATCAGCAAAAACCAATGCCGTTATTTTTATTGTGGAAAGGTATTATTCATACTACTCTGCGTCATC CTGAACACAAATATCTGGTTGGAGGTGTAAGTATCAGTAATCAGTTTTCAGACTTCTCTAAATCATTGATGATTGAGTTC ATGAAATCGAATTATTACGATCCGTATATCGCTCAATATATCCATCCGAAAAAAGCTTATAAGGTAAAATTAAAAGACGC TGATAAAGATTTTATTTTTGATGAAGCAGAATCTGACTTAAATAAATTCGATAAAATCATTGATGAGTTAGAACCAGGAA ACCTTCGTTTGCCGGTTTTAATCAAAAAATACATCAAACAAAATGCCCGCGTAGTTGCTTTTAATGTCGATCCTTTATTT AATAATGCAATTGATGGTTTAATGTACATTAGAATCGCAGATATTCCTGAAAGCACTATGAAACCTGTTATTGAAGAGTT TCAAATAGAATTAGAGCGTAAATTATCTGAAAAAGAAGATTAG
Upstream 100 bases:
>100_bases TCCAAATGTAATAAAAAAGTGCAAAGTTTATTTTGGAAACAGCGAAAAGTAGAGTTTTTTGTTATCTTTGTTCGCTGTTC TAATAAATTAAAAATAGTAC
Downstream 100 bases:
>100_bases TTATAATCTCCCGAAATAAAAAAATCCCATTTGCAAATGCAAATGGGATTTTTTAGTTCAACTCAACTGAAATTATTTGT TTATCTTTTATTTTAGCAAT
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: Hemolysin; Acyltransferase Domain Protein; Acyltransferase Family Protein; Acyltransferase Domain-Containing Protein; Hemolysin A; Acyltransferase; Phosphate Acyltransferase Family Protein; Acyltransferase Protein; Phospholipid/Glycerol Acyltransferase Hemolysin; DNA Polymerase III Subunit Alpha; Sulfolipid Biosynthesis Protein SqdA; Acetyltransferase
Number of amino acids: Translated: 600; Mature: 599
Protein sequence:
>600_residues MGLVTAKEVAKAINVEKYGVLGTFSGWILMKVLKISTLNKIYDHNKHLEDVAFLNGILDEMEIKFEIPEEDLKRLPKEGP YITISNHPLGGIDGILLLKLMLEREPNFKIIANFLLHRIVPLKKYIMPVNPFENHKDAKSSVVGIKETLRHLSDGKPLGI FPAGEVSTYKDGKLVVDKPWEEGALKLIRKAKVPVVPIYFHAKNSKLFYWLSKIDDTLRTAKLPSELLTQKDRVIKVRIG KPISVSEQNEIESFEEYSEFLRRKTYMLANPFEKDTKLIDTASLKIPKAPKKIVTPANESKMLDEVQALRDSDCRFLQSK NYEVFFARAKSIPNILHEIGRLREITFREVGEGTNESIDIDQYDQYYHHMFLWDDDTKKIAGAYRMGLGSEIYPKYGIEG FYLTDLFRFEPELHDMMHKSIEMGRAFITREYQQKPMPLFLLWKGIIHTTLRHPEHKYLVGGVSISNQFSDFSKSLMIEF MKSNYYDPYIAQYIHPKKAYKVKLKDADKDFIFDEAESDLNKFDKIIDELEPGNLRLPVLIKKYIKQNARVVAFNVDPLF NNAIDGLMYIRIADIPESTMKPVIEEFQIELERKLSEKED
Sequences:
>Translated_600_residues MGLVTAKEVAKAINVEKYGVLGTFSGWILMKVLKISTLNKIYDHNKHLEDVAFLNGILDEMEIKFEIPEEDLKRLPKEGP YITISNHPLGGIDGILLLKLMLEREPNFKIIANFLLHRIVPLKKYIMPVNPFENHKDAKSSVVGIKETLRHLSDGKPLGI FPAGEVSTYKDGKLVVDKPWEEGALKLIRKAKVPVVPIYFHAKNSKLFYWLSKIDDTLRTAKLPSELLTQKDRVIKVRIG KPISVSEQNEIESFEEYSEFLRRKTYMLANPFEKDTKLIDTASLKIPKAPKKIVTPANESKMLDEVQALRDSDCRFLQSK NYEVFFARAKSIPNILHEIGRLREITFREVGEGTNESIDIDQYDQYYHHMFLWDDDTKKIAGAYRMGLGSEIYPKYGIEG FYLTDLFRFEPELHDMMHKSIEMGRAFITREYQQKPMPLFLLWKGIIHTTLRHPEHKYLVGGVSISNQFSDFSKSLMIEF MKSNYYDPYIAQYIHPKKAYKVKLKDADKDFIFDEAESDLNKFDKIIDELEPGNLRLPVLIKKYIKQNARVVAFNVDPLF NNAIDGLMYIRIADIPESTMKPVIEEFQIELERKLSEKED >Mature_599_residues GLVTAKEVAKAINVEKYGVLGTFSGWILMKVLKISTLNKIYDHNKHLEDVAFLNGILDEMEIKFEIPEEDLKRLPKEGPY ITISNHPLGGIDGILLLKLMLEREPNFKIIANFLLHRIVPLKKYIMPVNPFENHKDAKSSVVGIKETLRHLSDGKPLGIF PAGEVSTYKDGKLVVDKPWEEGALKLIRKAKVPVVPIYFHAKNSKLFYWLSKIDDTLRTAKLPSELLTQKDRVIKVRIGK PISVSEQNEIESFEEYSEFLRRKTYMLANPFEKDTKLIDTASLKIPKAPKKIVTPANESKMLDEVQALRDSDCRFLQSKN YEVFFARAKSIPNILHEIGRLREITFREVGEGTNESIDIDQYDQYYHHMFLWDDDTKKIAGAYRMGLGSEIYPKYGIEGF YLTDLFRFEPELHDMMHKSIEMGRAFITREYQQKPMPLFLLWKGIIHTTLRHPEHKYLVGGVSISNQFSDFSKSLMIEFM KSNYYDPYIAQYIHPKKAYKVKLKDADKDFIFDEAESDLNKFDKIIDELEPGNLRLPVLIKKYIKQNARVVAFNVDPLFN NAIDGLMYIRIADIPESTMKPVIEEFQIELERKLSEKED
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69528; Mature: 69396
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLVTAKEVAKAINVEKYGVLGTFSGWILMKVLKISTLNKIYDHNKHLEDVAFLNGILDE CCCCCHHHHHHHHCCHHCCEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC MEIKFEIPEEDLKRLPKEGPYITISNHPLGGIDGILLLKLMLEREPNFKIIANFLLHRIV CEEEEECCHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH PLKKYIMPVNPFENHKDAKSSVVGIKETLRHLSDGKPLGIFPAGEVSTYKDGKLVVDKPW HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEEECCC EEGALKLIRKAKVPVVPIYFHAKNSKLFYWLSKIDDTLRTAKLPSELLTQKDRVIKVRIG HHHHHHHHHHCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHCCCHHHHCCCCCEEEEEEC KPISVSEQNEIESFEEYSEFLRRKTYMLANPFEKDTKLIDTASLKIPKAPKKIVTPANES CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCCCCCHHHCCCCCHH KMLDEVQALRDSDCRFLQSKNYEVFFARAKSIPNILHEIGRLREITFREVGEGTNESIDI HHHHHHHHHHCCCCHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DQYDQYYHHMFLWDDDTKKIAGAYRMGLGSEIYPKYGIEGFYLTDLFRFEPELHDMMHKS HHHHHHHHEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHCCHHHHHHHHHH IEMGRAFITREYQQKPMPLFLLWKGIIHTTLRHPEHKYLVGGVSISNQFSDFSKSLMIEF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECEECCHHHHHHHHHHHHHH MKSNYYDPYIAQYIHPKKAYKVKLKDADKDFIFDEAESDLNKFDKIIDELEPGNLRLPVL HHCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHH IKKYIKQNARVVAFNVDPLFNNAIDGLMYIRIADIPESTMKPVIEEFQIELERKLSEKED HHHHHHCCCEEEEEECCHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GLVTAKEVAKAINVEKYGVLGTFSGWILMKVLKISTLNKIYDHNKHLEDVAFLNGILDE CCCCHHHHHHHHCCHHCCEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC MEIKFEIPEEDLKRLPKEGPYITISNHPLGGIDGILLLKLMLEREPNFKIIANFLLHRIV CEEEEECCHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH PLKKYIMPVNPFENHKDAKSSVVGIKETLRHLSDGKPLGIFPAGEVSTYKDGKLVVDKPW HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEEECCC EEGALKLIRKAKVPVVPIYFHAKNSKLFYWLSKIDDTLRTAKLPSELLTQKDRVIKVRIG HHHHHHHHHHCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHCCCHHHHCCCCCEEEEEEC KPISVSEQNEIESFEEYSEFLRRKTYMLANPFEKDTKLIDTASLKIPKAPKKIVTPANES CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCCCCCHHHCCCCCHH KMLDEVQALRDSDCRFLQSKNYEVFFARAKSIPNILHEIGRLREITFREVGEGTNESIDI HHHHHHHHHHCCCCHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DQYDQYYHHMFLWDDDTKKIAGAYRMGLGSEIYPKYGIEGFYLTDLFRFEPELHDMMHKS HHHHHHHHEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHCCHHHHHHHHHH IEMGRAFITREYQQKPMPLFLLWKGIIHTTLRHPEHKYLVGGVSISNQFSDFSKSLMIEF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECEECCHHHHHHHHHHHHHH MKSNYYDPYIAQYIHPKKAYKVKLKDADKDFIFDEAESDLNKFDKIIDELEPGNLRLPVL HHCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHH IKKYIKQNARVVAFNVDPLFNNAIDGLMYIRIADIPESTMKPVIEEFQIELERKLSEKED HHHHHHCCCEEEEEECCHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA