| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yeaC [H]
Identifier: 146298478
GI number: 146298478
Start: 788840
End: 789844
Strand: Direct
Name: yeaC [H]
Synonym: Fjoh_0715
Alternate gene names: 146298478
Gene position: 788840-789844 (Clockwise)
Preceding gene: 146298474
Following gene: 146298479
Centisome position: 12.94
GC content: 38.11
Gene sequence:
>1005_bases ATGGAAGAAAATACAACGACTTTAGACATTAGAGCGATAAATGAAAAAATTGAGAGAGAAAGTGCTTTTATAGACCTTCT TACAATGGAAATGAACAAAGTTATTGTGGGCCAGAAACACATGGTCGAGCGTCTTTTAATCGGTCTTTTGGGTCAGGGGC ATATTTTACTTGAAGGTGTTCCCGGTTTAGCAAAAACTTTAGCGATTAATACGTTGTCACAAGCGGTTCAGGGTTCTTTC AGCCGTATCCAGTTTACACCAGACTTACTTCCTGCCGATGTTATCGGAACCATGATTTACAACATCAAAGCAAACGAATT TTCTATTAAAAAAGGACCAATTTTTGCTAATTTCGTCCTTGCCGATGAGATTAACCGTGCGCCTGCAAAAGTACAATCTG CACTTTTAGAGGCGATGCAGGAAAAACAAGTTACAATTGGTGACTCAACTTTCAAATTAGACCGTCCGTTTTTAGTTTTA GCAACTCAAAACCCTGTTGAACAGGAAGGAACATATGCACTGCCTGAAGCTCAGGTTGACCGTTTTATGTTGAAAACGGT AATTGATTACCCAAAAATTGACGAAGAACGTTTTGTAATCCGCCAGAACTTAAAAGGAAGTTACGAAAAAGTAAACCCTG TAGTTTCTGTAGATCAAATTTTACGTGCGCAGGAAGCGGTTCGTGAAGTTTATATGGATGAAAAAATTGAAAAATATATC TTAGATATCATCTTTGCTACACGTTATCCAGAAAAATACAAATTAGCCGACTTAAAACCGCTTATCAGTTTTGGAGCATC TCCGCGTGGAAGTATCAACTTAGCAAATGCTGCTAAATGTTACGCATTTATTAAACGCCGTGGTTATGTAATTCCAGAAG ATGTTCGCGCTGTTGTGCATGATGTATTACGTCACAGAGTTGGGATAACATACGAGGCTGAAGCCGAAAATATTACTTCT GTAGACATTATCAACAAAATCGTAAACGAGATTGAAGTACCTTAA
Upstream 100 bases:
>100_bases CGAAGTTTTAACCATTCTTTAACATCTTACTTCTCAAAAAATATTCAATTTGCACTCTCAAAAATTAGGCGTACAAATCA AGGTTTTTAAAAATATTTAT
Downstream 100 bases:
>100_bases AAAGTTGATGGTTGATAGTTTTTTGTTGATGGTTCTTTTGCCATCAACCAACAACCATAAACCATAAACCAAACAAAAAA TGGATACAAAAGAGCTTTTA
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MEENTTTLDIRAINEKIERESAFIDLLTMEMNKVIVGQKHMVERLLIGLLGQGHILLEGVPGLAKTLAINTLSQAVQGSF SRIQFTPDLLPADVIGTMIYNIKANEFSIKKGPIFANFVLADEINRAPAKVQSALLEAMQEKQVTIGDSTFKLDRPFLVL ATQNPVEQEGTYALPEAQVDRFMLKTVIDYPKIDEERFVIRQNLKGSYEKVNPVVSVDQILRAQEAVREVYMDEKIEKYI LDIIFATRYPEKYKLADLKPLISFGASPRGSINLANAAKCYAFIKRRGYVIPEDVRAVVHDVLRHRVGITYEAEAENITS VDIINKIVNEIEVP
Sequences:
>Translated_334_residues MEENTTTLDIRAINEKIERESAFIDLLTMEMNKVIVGQKHMVERLLIGLLGQGHILLEGVPGLAKTLAINTLSQAVQGSF SRIQFTPDLLPADVIGTMIYNIKANEFSIKKGPIFANFVLADEINRAPAKVQSALLEAMQEKQVTIGDSTFKLDRPFLVL ATQNPVEQEGTYALPEAQVDRFMLKTVIDYPKIDEERFVIRQNLKGSYEKVNPVVSVDQILRAQEAVREVYMDEKIEKYI LDIIFATRYPEKYKLADLKPLISFGASPRGSINLANAAKCYAFIKRRGYVIPEDVRAVVHDVLRHRVGITYEAEAENITS VDIINKIVNEIEVP >Mature_334_residues MEENTTTLDIRAINEKIERESAFIDLLTMEMNKVIVGQKHMVERLLIGLLGQGHILLEGVPGLAKTLAINTLSQAVQGSF SRIQFTPDLLPADVIGTMIYNIKANEFSIKKGPIFANFVLADEINRAPAKVQSALLEAMQEKQVTIGDSTFKLDRPFLVL ATQNPVEQEGTYALPEAQVDRFMLKTVIDYPKIDEERFVIRQNLKGSYEKVNPVVSVDQILRAQEAVREVYMDEKIEKYI LDIIFATRYPEKYKLADLKPLISFGASPRGSINLANAAKCYAFIKRRGYVIPEDVRAVVHDVLRHRVGITYEAEAENITS VDIINKIVNEIEVP
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 37606; Mature: 37606
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS00284 SERPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEENTTTLDIRAINEKIERESAFIDLLTMEMNKVIVGQKHMVERLLIGLLGQGHILLEGV CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECC PGLAKTLAINTLSQAVQGSFSRIQFTPDLLPADVIGTMIYNIKANEFSIKKGPIFANFVL CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHEEECCCEEEECCCEEEEEEE ADEINRAPAKVQSALLEAMQEKQVTIGDSTFKLDRPFLVLATQNPVEQEGTYALPEAQVD HHHCCCCHHHHHHHHHHHHHHCCEEECCCEEEECCCEEEEEECCCCCCCCCEECCHHHHH RFMLKTVIDYPKIDEERFVIRQNLKGSYEKVNPVVSVDQILRAQEAVREVYMDEKIEKYI HHHHHHHHCCCCCCCHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LDIIFATRYPEKYKLADLKPLISFGASPRGSINLANAAKCYAFIKRRGYVIPEDVRAVVH HHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHH DVLRHRVGITYEAEAENITSVDIINKIVNEIEVP HHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MEENTTTLDIRAINEKIERESAFIDLLTMEMNKVIVGQKHMVERLLIGLLGQGHILLEGV CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECC PGLAKTLAINTLSQAVQGSFSRIQFTPDLLPADVIGTMIYNIKANEFSIKKGPIFANFVL CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHEEECCCEEEECCCEEEEEEE ADEINRAPAKVQSALLEAMQEKQVTIGDSTFKLDRPFLVLATQNPVEQEGTYALPEAQVD HHHCCCCHHHHHHHHHHHHHHCCEEECCCEEEECCCEEEEEECCCCCCCCCEECCHHHHH RFMLKTVIDYPKIDEERFVIRQNLKGSYEKVNPVVSVDQILRAQEAVREVYMDEKIEKYI HHHHHHHHCCCCCCCHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LDIIFATRYPEKYKLADLKPLISFGASPRGSINLANAAKCYAFIKRRGYVIPEDVRAVVH HHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHH DVLRHRVGITYEAEAENITSVDIINKIVNEIEVP HHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]