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The map label for this gene is 146298479

Identifier: 146298479

GI number: 146298479

Start: 789924

End: 790787

Strand: Direct

Name: 146298479

Synonym: Fjoh_0716

Alternate gene names: NA

Gene position: 789924-790787 (Clockwise)

Preceding gene: 146298478

Following gene: 146298480

Centisome position: 12.96

GC content: 34.84

Gene sequence:

>864_bases
ATGGATACAAAAGAGCTTTTAAAAAAAGTACGGAAAATAGAAATCAAGACCAAAAGACTGAGCAATCATATCTTTTCGGG
TGAATACCACTCTTCATTTAAAGGACGAGGAATGACGTTTAGCGAGGTGCGTCAATACCAATACGGAGATGATATTCGTA
ACATCGATTGGAATGTAACCGCACGCTACAACGAAGCCCACGTAAAAGTTTTTGAAGAAGAACGTGAATTAACCATGGTT
TTAATGGTTGATATTTCGGGTTCTGAAGGTTTTGGTTCAAAAAGTCAGTTTAAAAAAGACATCGTAACAGAGATTGCTGC
CACGATGGCTTTTTCGGCTACACAAAATAATGATAAGATTGGATTAATCTTATTTTCTGATAATGTCGAATTATACATTC
CGCCCAAAAAAGGCCGTTCGCATGTTTTGAGAATTATTCGTGAATTAATCGAATTTGAACCAAAAAGTCAGAAAACAGAT
GTTGCACAGGCTTTAAAATTCTTATCAGGAACTCAAAAAAAGAAAGCAATTGTTTTTATGATTTCAGATTTTATGTCTGA
AAATTATGAACAGACCTTAAAAATTGCTTCAAAAAAGCATGACCTTACAGGCGTTCGTGTGTACGATATCCGCGAAGAAA
AAATTCCGAATTTAGGAATGGTAACGATGTTAGATGCCGAAACCGGAAAAACGCAGTTAGTCGATACAGGTTCAAAAACC
GTGCGAATGAATTACGAAAAACATTATCAGGAAAGAGTAAATTATTTCAAAGATACATTTCGTAAATCTGGTGCAGGTAT
AGTTCACACAAGAGTCGACGAAAATTACGTAACTAAATTATTAGGTTATTTTAAATCAAGGTAA

Upstream 100 bases:

>100_bases
AACGAGATTGAAGTACCTTAAAAAGTTGATGGTTGATAGTTTTTTGTTGATGGTTCTTTTGCCATCAACCAACAACCATA
AACCATAAACCAAACAAAAA

Downstream 100 bases:

>100_bases
GATTTTTGATTTATGATTAACGATTTTTGATTTATGATCTATTATGATTATAACAAAAAGAAAGAATTAAGAAATGACTA
AACAAGAATTAGAAAATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MDTKELLKKVRKIEIKTKRLSNHIFSGEYHSSFKGRGMTFSEVRQYQYGDDIRNIDWNVTARYNEAHVKVFEEERELTMV
LMVDISGSEGFGSKSQFKKDIVTEIAATMAFSATQNNDKIGLILFSDNVELYIPPKKGRSHVLRIIRELIEFEPKSQKTD
VAQALKFLSGTQKKKAIVFMISDFMSENYEQTLKIASKKHDLTGVRVYDIREEKIPNLGMVTMLDAETGKTQLVDTGSKT
VRMNYEKHYQERVNYFKDTFRKSGAGIVHTRVDENYVTKLLGYFKSR

Sequences:

>Translated_287_residues
MDTKELLKKVRKIEIKTKRLSNHIFSGEYHSSFKGRGMTFSEVRQYQYGDDIRNIDWNVTARYNEAHVKVFEEERELTMV
LMVDISGSEGFGSKSQFKKDIVTEIAATMAFSATQNNDKIGLILFSDNVELYIPPKKGRSHVLRIIRELIEFEPKSQKTD
VAQALKFLSGTQKKKAIVFMISDFMSENYEQTLKIASKKHDLTGVRVYDIREEKIPNLGMVTMLDAETGKTQLVDTGSKT
VRMNYEKHYQERVNYFKDTFRKSGAGIVHTRVDENYVTKLLGYFKSR
>Mature_287_residues
MDTKELLKKVRKIEIKTKRLSNHIFSGEYHSSFKGRGMTFSEVRQYQYGDDIRNIDWNVTARYNEAHVKVFEEERELTMV
LMVDISGSEGFGSKSQFKKDIVTEIAATMAFSATQNNDKIGLILFSDNVELYIPPKKGRSHVLRIIRELIEFEPKSQKTD
VAQALKFLSGTQKKKAIVFMISDFMSENYEQTLKIASKKHDLTGVRVYDIREEKIPNLGMVTMLDAETGKTQLVDTGSKT
VRMNYEKHYQERVNYFKDTFRKSGAGIVHTRVDENYVTKLLGYFKSR

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.avium MAV169 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002881
- InterPro:   IPR002035 [H]

Pfam domain/function: PF01882 DUF58 [H]

EC number: NA

Molecular weight: Translated: 33203; Mature: 33203

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTKELLKKVRKIEIKTKRLSNHIFSGEYHSSFKGRGMTFSEVRQYQYGDDIRNIDWNVT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEE
ARYNEAHVKVFEEERELTMVLMVDISGSEGFGSKSQFKKDIVTEIAATMAFSATQNNDKI
EEECCCEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
GLILFSDNVELYIPPKKGRSHVLRIIRELIEFEPKSQKTDVAQALKFLSGTQKKKAIVFM
EEEEEECCEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEE
ISDFMSENYEQTLKIASKKHDLTGVRVYDIREEKIPNLGMVTMLDAETGKTQLVDTGSKT
EHHHHHCCHHHHHHHHHHCCCCCCEEEEECHHHCCCCCCEEEEEECCCCCEEEEECCCCE
VRMNYEKHYQERVNYFKDTFRKSGAGIVHTRVDENYVTKLLGYFKSR
EEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDTKELLKKVRKIEIKTKRLSNHIFSGEYHSSFKGRGMTFSEVRQYQYGDDIRNIDWNVT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEE
ARYNEAHVKVFEEERELTMVLMVDISGSEGFGSKSQFKKDIVTEIAATMAFSATQNNDKI
EEECCCEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
GLILFSDNVELYIPPKKGRSHVLRIIRELIEFEPKSQKTDVAQALKFLSGTQKKKAIVFM
EEEEEECCEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEE
ISDFMSENYEQTLKIASKKHDLTGVRVYDIREEKIPNLGMVTMLDAETGKTQLVDTGSKT
EHHHHHCCHHHHHHHHHHCCCCCCEEEEECHHHCCCCCCEEEEEECCCCCEEEEECCCCE
VRMNYEKHYQERVNYFKDTFRKSGAGIVHTRVDENYVTKLLGYFKSR
EEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]