Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146298449

Identifier: 146298449

GI number: 146298449

Start: 751793

End: 752206

Strand: Direct

Name: 146298449

Synonym: Fjoh_0686

Alternate gene names: NA

Gene position: 751793-752206 (Clockwise)

Preceding gene: 146298443

Following gene: 146298451

Centisome position: 12.33

GC content: 30.43

Gene sequence:

>414_bases
ATGAGCACAGTAAAACCAAAACATATCGGCAGAAACATTAGCCGAATTAGAGAACTGAGAGATATGAAGCAGGAAGCACT
TGCTATTGCAATTGGTACAAACCAACAATCTATCTCTATTATTGAAGGAAGCGAAAGTGTTGATGAAGAGAAACTAAAGA
AAATTGCGGAAGCTTTGGGAGTTTCAGCAGAAACTATTAAAAATTTTTCTGAAGATGCTGTTTTTAATATTATTGGAAAT
ACTATTGAAATAGAAAATAATACTGGTTCTTCAGTAATAAGTTATGGATGCACTTTTAATCCTTTAGATAAACTTATTGA
ATCTATTGAAAAGAATGAAAAACTTTATGAAAGATTAATTCAAATAGAAAGAGAGAAAGCTGCTTATTTGGAGAAGTTAC
TTGATAAGAAATAG

Upstream 100 bases:

>100_bases
ATTTTTACCCGCGAAAAGATTTACAATTTGTATCTCACAAGAACGAACTTGTTTTCTACTGAAACCAAAAATGTAACCAA
TTTTTAAATATCTTTGAACT

Downstream 100 bases:

>100_bases
AAATTTATTTTTATAAAAATAAAAAACCGAAGTTTTGAAATTTCAAAAGCTTCGGTTTTTTTATTCTTTAATTTTTATGC
GTGTTATTTTACACCTTCTA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: XRE Family Plasmid Maintenance System Antidote Protein; Helix-TurN-Helix Domain Protein; HTH_3 Family Transcriptional Regulator Protein; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSTVKPKHIGRNISRIRELRDMKQEALAIAIGTNQQSISIIEGSESVDEEKLKKIAEALGVSAETIKNFSEDAVFNIIGN
TIEIENNTGSSVISYGCTFNPLDKLIESIEKNEKLYERLIQIEREKAAYLEKLLDKK

Sequences:

>Translated_137_residues
MSTVKPKHIGRNISRIRELRDMKQEALAIAIGTNQQSISIIEGSESVDEEKLKKIAEALGVSAETIKNFSEDAVFNIIGN
TIEIENNTGSSVISYGCTFNPLDKLIESIEKNEKLYERLIQIEREKAAYLEKLLDKK
>Mature_136_residues
STVKPKHIGRNISRIRELRDMKQEALAIAIGTNQQSISIIEGSESVDEEKLKKIAEALGVSAETIKNFSEDAVFNIIGNT
IEIENNTGSSVISYGCTFNPLDKLIESIEKNEKLYERLIQIEREKAAYLEKLLDKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15398; Mature: 15267

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVKPKHIGRNISRIRELRDMKQEALAIAIGTNQQSISIIEGSESVDEEKLKKIAEALG
CCCCCHHHHCCHHHHHHHHHHHHHHHEEHEECCCCCEEEEECCCCCCCHHHHHHHHHHHC
VSAETIKNFSEDAVFNIIGNTIEIENNTGSSVISYGCTFNPLDKLIESIEKNEKLYERLI
CCHHHHHCCCHHHHHHHHCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
QIEREKAAYLEKLLDKK
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STVKPKHIGRNISRIRELRDMKQEALAIAIGTNQQSISIIEGSESVDEEKLKKIAEALG
CCCCHHHHCCHHHHHHHHHHHHHHHEEHEECCCCCEEEEECCCCCCCHHHHHHHHHHHC
VSAETIKNFSEDAVFNIIGNTIEIENNTGSSVISYGCTFNPLDKLIESIEKNEKLYERLI
CCHHHHHCCCHHHHHHHHCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
QIEREKAAYLEKLLDKK
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA