| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298435
Identifier: 146298435
GI number: 146298435
Start: 735361
End: 736431
Strand: Direct
Name: 146298435
Synonym: Fjoh_0672
Alternate gene names: NA
Gene position: 735361-736431 (Clockwise)
Preceding gene: 146298434
Following gene: 146298437
Centisome position: 12.06
GC content: 39.5
Gene sequence:
>1071_bases ATGTTTATAATAGACGCCCATTTAGACCTGAGCATGAATGCAATGGAATGGAATCGTGATTTAAGAAATGATGTTCCCAC GCTGCGCAGTTTAGAAAAAGGAATGACCGACAAACCAGACCGTGAACGTGCAACGGTTTCATTTCCTGATTTACGCAAAG GCAATATAGGAATTGTGGTAGCTACGCAAATTGCAAGATTTGTAAAACCAGACAGTTTAATTCCGGGCTGGAATTCTCCT GAACAGGCCTGGGCACAAACACAAGGACAGCTGGCGTGGTACAAAGCCATGGAAGAAGCGGGAGAAATAACCCAAATTAC AGATAAAAAATCGCTCCAGAAACAAATTGATTTATGGAACGACGGAACGTCAAACGATAAAAAACCAATTGGCTATATTT TGAGTTTAGAAGGTGCTGATTCCATTATTGATATTTCGTATTTAGAAAAAGCCTACAATTACGGATTACGTGCGATTGGC CCTGCGCATTACGGCCCTGGGCGTTATGCAAACGGAACGGACGCAACTGGAAAAATGAATCAAAACGGAATTGATTTATT AAAAGAAATGGAACGTTTAAATATAATTCTGGACGCAACGCATTTATGCGATGATGCTTTTTGGCAGGCTTTAGATAATT ATAACGGCCCCGTTTGGGCAAGTCATAACAATTGCAGGAGTCTGGTTGATCATAATCGCCAATACAGCGATGAAATGATC AAAGCTTTAATTTCTAGAGGAGCCGTTATTGGCGGTGCTTTAGATGCGTGGATGCTGGTTCCAAATTGGGAAAGAGGTGT TTCGATGCCGTTAGAAATGAATTGCAATCTTGAAACCGTTTTCAAACACATGGATCACATTTGTCAATTGGCTGGAAATG CGAATCACATTGGCGTAGGTTCAGATTTAGATGGTGCTTTTGGTACAGAACAATCTCCGTATGATTTAAACACCATTGCC GATTTACAAAAATTGGTTCTGATATTTAAAAACAACGGTTATTCTGATGAAGATTTAGATAAAATCTTTCACCAGAACTG GATCAATTTTTTAATGAAGAATTGGGATTAA
Upstream 100 bases:
>100_bases TGCTGTTCAGGTTGTAAATAAAGGACATCAAATTTGCGATCAATGGAAAGTTGCGGCCCGAAGCAGAGAAATTAGTATAT AAAATTTAAGTCAAAAATAT
Downstream 100 bases:
>100_bases ATAAAAACTAAACTTGGAACTGCCTTCTTATATGATTGTAATTTTTCGTCGCTTGGATCAACTTCCGTCACAACGTAATC TACTTCAGATAAGTTGGCAA
Product: peptidase M19, renal dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MFIIDAHLDLSMNAMEWNRDLRNDVPTLRSLEKGMTDKPDRERATVSFPDLRKGNIGIVVATQIARFVKPDSLIPGWNSP EQAWAQTQGQLAWYKAMEEAGEITQITDKKSLQKQIDLWNDGTSNDKKPIGYILSLEGADSIIDISYLEKAYNYGLRAIG PAHYGPGRYANGTDATGKMNQNGIDLLKEMERLNIILDATHLCDDAFWQALDNYNGPVWASHNNCRSLVDHNRQYSDEMI KALISRGAVIGGALDAWMLVPNWERGVSMPLEMNCNLETVFKHMDHICQLAGNANHIGVGSDLDGAFGTEQSPYDLNTIA DLQKLVLIFKNNGYSDEDLDKIFHQNWINFLMKNWD
Sequences:
>Translated_356_residues MFIIDAHLDLSMNAMEWNRDLRNDVPTLRSLEKGMTDKPDRERATVSFPDLRKGNIGIVVATQIARFVKPDSLIPGWNSP EQAWAQTQGQLAWYKAMEEAGEITQITDKKSLQKQIDLWNDGTSNDKKPIGYILSLEGADSIIDISYLEKAYNYGLRAIG PAHYGPGRYANGTDATGKMNQNGIDLLKEMERLNIILDATHLCDDAFWQALDNYNGPVWASHNNCRSLVDHNRQYSDEMI KALISRGAVIGGALDAWMLVPNWERGVSMPLEMNCNLETVFKHMDHICQLAGNANHIGVGSDLDGAFGTEQSPYDLNTIA DLQKLVLIFKNNGYSDEDLDKIFHQNWINFLMKNWD >Mature_356_residues MFIIDAHLDLSMNAMEWNRDLRNDVPTLRSLEKGMTDKPDRERATVSFPDLRKGNIGIVVATQIARFVKPDSLIPGWNSP EQAWAQTQGQLAWYKAMEEAGEITQITDKKSLQKQIDLWNDGTSNDKKPIGYILSLEGADSIIDISYLEKAYNYGLRAIG PAHYGPGRYANGTDATGKMNQNGIDLLKEMERLNIILDATHLCDDAFWQALDNYNGPVWASHNNCRSLVDHNRQYSDEMI KALISRGAVIGGALDAWMLVPNWERGVSMPLEMNCNLETVFKHMDHICQLAGNANHIGVGSDLDGAFGTEQSPYDLNTIA DLQKLVLIFKNNGYSDEDLDKIFHQNWINFLMKNWD
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI11641269, Length=279, Percent_Identity=24.0143369175627, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 40123; Mature: 40123
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIIDAHLDLSMNAMEWNRDLRNDVPTLRSLEKGMTDKPDRERATVSFPDLRKGNIGIVV CEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEEEE ATQIARFVKPDSLIPGWNSPEQAWAQTQGQLAWYKAMEEAGEITQITDKKSLQKQIDLWN HHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC DGTSNDKKPIGYILSLEGADSIIDISYLEKAYNYGLRAIGPAHYGPGRYANGTDATGKMN CCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCC QNGIDLLKEMERLNIILDATHLCDDAFWQALDNYNGPVWASHNNCRSLVDHNRQYSDEMI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCCCHHHHHH KALISRGAVIGGALDAWMLVPNWERGVSMPLEMNCNLETVFKHMDHICQLAGNANHIGVG HHHHHCCCEEECCHHHEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCEECCC SDLDGAFGTEQSPYDLNTIADLQKLVLIFKNNGYSDEDLDKIFHQNWINFLMKNWD CCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFIIDAHLDLSMNAMEWNRDLRNDVPTLRSLEKGMTDKPDRERATVSFPDLRKGNIGIVV CEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEEEE ATQIARFVKPDSLIPGWNSPEQAWAQTQGQLAWYKAMEEAGEITQITDKKSLQKQIDLWN HHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC DGTSNDKKPIGYILSLEGADSIIDISYLEKAYNYGLRAIGPAHYGPGRYANGTDATGKMN CCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCC QNGIDLLKEMERLNIILDATHLCDDAFWQALDNYNGPVWASHNNCRSLVDHNRQYSDEMI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCCCHHHHHH KALISRGAVIGGALDAWMLVPNWERGVSMPLEMNCNLETVFKHMDHICQLAGNANHIGVG HHHHHCCCEEECCHHHEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCEECCC SDLDGAFGTEQSPYDLNTIADLQKLVLIFKNNGYSDEDLDKIFHQNWINFLMKNWD CCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]