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The map label for this gene is 146298434

Identifier: 146298434

GI number: 146298434

Start: 734227

End: 735342

Strand: Direct

Name: 146298434

Synonym: Fjoh_0671

Alternate gene names: NA

Gene position: 734227-735342 (Clockwise)

Preceding gene: 146298433

Following gene: 146298435

Centisome position: 12.04

GC content: 35.57

Gene sequence:

>1116_bases
ATGGAAGAAAATTGGTGGAAAATTAAATCTGATATCTTAATTGATACGCCGTTTTTAGCTGTTTACGAAGATCGTATCCG
GTTTAATCTGGAGCGTCTTATTCGCTCAGTAAGCGGTGACACGCAAAAACTAAGACCTCATATTAAAACACATAAAATTG
GCGAAATTCTGGAATTGTTTAAAATCTATAATATCAAAAAGATAAAATGTGCCACAATTGCCGAAGCCGAACTTGCAGCG
ATTCACGAAATTCCAGATGTTCTTCTCGCCTACCAGCCTGTTGGAATTAAAAAGGAAAGATGGATTTCGCTGCTTCAAAA
ATATCCGGATACTTATTTTTCGACTATTGTCGACAATCTGGAATCGGCGAAAGCCTTAAATGAAACTGCTAAAGAAAACA
ACCTGAAACTGAATGTTTATCTGGATTTAAATACCGGAATGAACAGAACCGGATTCTCCATTTCGCAAGATTGGACGGCT
TTAATTGATAAAATTGTTAAGTTAAAAAATCTTCATTTTGAAGGCATTCATATTTACGACGGTCATTTAAAAGGAACCGT
TGAAGAACGAACCCATACAGCTTCAAACTCATTTTCTGAAATAAAAGAAAAAGCAGAAGCGATTGGGGAAAAACTGGGTT
ACGAATTAAAAATTGTTGCCGGAGGTTCTAATACATTTCCTTTTTATGCAACTCAGGAAAACGTAGAATGCAGTCCTGGA
ACTTTTGTTTTTTGGGATTTTAATTATCAATCTAATTTACCAGAACAAAATTTTAAACCTGCTTTGGTAATCGTTGGAAC
TATCATTTCAAAACCAACAAATTCTACGCTTTGTATTGACATTGGCTACAAAGCTGTTTCTTCAGAAAATCCAATTGATA
AACGATTGGTGATTTTAAATGATGAAAATCTGATTCCGACAGCACATTCTGAAGAGCATTTGATTTTGGAAAACCAAGGA
AAAAACGAGTATAAAATTGGTGACACCATTTATGCGCTTCCTTATCATGTCTGCCCTACCTGCGCACTTTATGATGCTGT
TCAGGTTGTAAATAAAGGACATCAAATTTGCGATCAATGGAAAGTTGCGGCCCGAAGCAGAGAAATTAGTATATAA

Upstream 100 bases:

>100_bases
TTTATTTTCAAAAGAAATGCTTTTGAATTTAAATTATGAAGAAGCGCTCCAGGCTTTTCAAAATTTAATTGAAGTAGTAG
AAAAAACAAGAAACTAAGTT

Downstream 100 bases:

>100_bases
AATTTAAGTCAAAAATATATGTTTATAATAGACGCCCATTTAGACCTGAGCATGAATGCAATGGAATGGAATCGTGATTT
AAGAAATGATGTTCCCACGC

Product: alanine racemase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MEENWWKIKSDILIDTPFLAVYEDRIRFNLERLIRSVSGDTQKLRPHIKTHKIGEILELFKIYNIKKIKCATIAEAELAA
IHEIPDVLLAYQPVGIKKERWISLLQKYPDTYFSTIVDNLESAKALNETAKENNLKLNVYLDLNTGMNRTGFSISQDWTA
LIDKIVKLKNLHFEGIHIYDGHLKGTVEERTHTASNSFSEIKEKAEAIGEKLGYELKIVAGGSNTFPFYATQENVECSPG
TFVFWDFNYQSNLPEQNFKPALVIVGTIISKPTNSTLCIDIGYKAVSSENPIDKRLVILNDENLIPTAHSEEHLILENQG
KNEYKIGDTIYALPYHVCPTCALYDAVQVVNKGHQICDQWKVAARSREISI

Sequences:

>Translated_371_residues
MEENWWKIKSDILIDTPFLAVYEDRIRFNLERLIRSVSGDTQKLRPHIKTHKIGEILELFKIYNIKKIKCATIAEAELAA
IHEIPDVLLAYQPVGIKKERWISLLQKYPDTYFSTIVDNLESAKALNETAKENNLKLNVYLDLNTGMNRTGFSISQDWTA
LIDKIVKLKNLHFEGIHIYDGHLKGTVEERTHTASNSFSEIKEKAEAIGEKLGYELKIVAGGSNTFPFYATQENVECSPG
TFVFWDFNYQSNLPEQNFKPALVIVGTIISKPTNSTLCIDIGYKAVSSENPIDKRLVILNDENLIPTAHSEEHLILENQG
KNEYKIGDTIYALPYHVCPTCALYDAVQVVNKGHQICDQWKVAARSREISI
>Mature_371_residues
MEENWWKIKSDILIDTPFLAVYEDRIRFNLERLIRSVSGDTQKLRPHIKTHKIGEILELFKIYNIKKIKCATIAEAELAA
IHEIPDVLLAYQPVGIKKERWISLLQKYPDTYFSTIVDNLESAKALNETAKENNLKLNVYLDLNTGMNRTGFSISQDWTA
LIDKIVKLKNLHFEGIHIYDGHLKGTVEERTHTASNSFSEIKEKAEAIGEKLGYELKIVAGGSNTFPFYATQENVECSPG
TFVFWDFNYQSNLPEQNFKPALVIVGTIISKPTNSTLCIDIGYKAVSSENPIDKRLVILNDENLIPTAHSEEHLILENQG
KNEYKIGDTIYALPYHVCPTCALYDAVQVVNKGHQICDQWKVAARSREISI

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 42189; Mature: 42189

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEENWWKIKSDILIDTPFLAVYEDRIRFNLERLIRSVSGDTQKLRPHIKTHKIGEILELF
CCCCCEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHH
KIYNIKKIKCATIAEAELAAIHEIPDVLLAYQPVGIKKERWISLLQKYPDTYFSTIVDNL
HHCCCCEEEEEEHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCHHHHHHHHHHH
ESAKALNETAKENNLKLNVYLDLNTGMNRTGFSISQDWTALIDKIVKLKNLHFEGIHIYD
HHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEC
GHLKGTVEERTHTASNSFSEIKEKAEAIGEKLGYELKIVAGGSNTFPFYATQENVECSPG
CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCC
TFVFWDFNYQSNLPEQNFKPALVIVGTIISKPTNSTLCIDIGYKAVSSENPIDKRLVILN
EEEEEEECCCCCCCCCCCCCEEEEEEHHHCCCCCCEEEEEECCEECCCCCCCCCEEEEEC
DENLIPTAHSEEHLILENQGKNEYKIGDTIYALPYHVCPTCALYDAVQVVNKGHQICDQW
CCCCCCCCCCCCEEEEECCCCCCEEECCEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHH
KVAARSREISI
HHHHCCCCCCC
>Mature Secondary Structure
MEENWWKIKSDILIDTPFLAVYEDRIRFNLERLIRSVSGDTQKLRPHIKTHKIGEILELF
CCCCCEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHH
KIYNIKKIKCATIAEAELAAIHEIPDVLLAYQPVGIKKERWISLLQKYPDTYFSTIVDNL
HHCCCCEEEEEEHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCHHHHHHHHHHH
ESAKALNETAKENNLKLNVYLDLNTGMNRTGFSISQDWTALIDKIVKLKNLHFEGIHIYD
HHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEC
GHLKGTVEERTHTASNSFSEIKEKAEAIGEKLGYELKIVAGGSNTFPFYATQENVECSPG
CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCC
TFVFWDFNYQSNLPEQNFKPALVIVGTIISKPTNSTLCIDIGYKAVSSENPIDKRLVILN
EEEEEEECCCCCCCCCCCCCEEEEEEHHHCCCCCCEEEEEECCEECCCCCCCCCEEEEEC
DENLIPTAHSEEHLILENQGKNEYKIGDTIYALPYHVCPTCALYDAVQVVNKGHQICDQW
CCCCCCCCCCCCEEEEECCCCCCEEECCEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHH
KVAARSREISI
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]