| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298395
Identifier: 146298395
GI number: 146298395
Start: 692638
End: 693033
Strand: Direct
Name: 146298395
Synonym: Fjoh_0632
Alternate gene names: NA
Gene position: 692638-693033 (Clockwise)
Preceding gene: 146298394
Following gene: 146298399
Centisome position: 11.36
GC content: 34.34
Gene sequence:
>396_bases ATGAGCACAGCAACAAAACCAAATCATATAGGGCGAAAAATAAGCCGTATTCGTGAACTTCGCGATATGAAGCAAGAAGC TTTGGCACAAGCTTTAGGAACAAACCAGCAAGCTATTTCTACAATAGAAAATAGTGAAACTATAGACGAGGCAAAACTTA TTGAAATAGCAAAAGCACTTGGTGTAACTCCAGAAGCTATAAAAAGTTTTTCGGAAGAAAATGTGTTTAATTATTTTAAC ACATTCACAGATAGCCACGGAAATTTTGGAAATTTTGCCAGTGGAGCAATTTGCAATTTCAATCCTCTTGACAAAGTAGT TGAACTTTATGAGCGTTTGGTTCAGGTTGAAAAAGATAAAGTTGAGTATTTAGAAAAATTAATGAAGGGGAAATAA
Upstream 100 bases:
>100_bases TATTTTTACTTCTTTTAAACGCTAAATCGTATTTTACCAAAACAAGTCTGTTTTTTACTGAAAATGGATTTGTAAAAGTT TTTTTAAATACCTTTGAATT
Downstream 100 bases:
>100_bases GTCCTTTCTATTTATCATATAAAAAAGCCATTTCTAAAAACAGAATTGGCTTTTTGTTTTCTAACTAAGGAATTACTTTG TGTTCGGGTAATCCCTACGG
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Xin-Antitoxin System Antitoxin Component Xre Family; Transcriptional Regulator; HTH_3 Family Transcriptional Regulator Protein; Helix-Turn-Helix Domain Protein; XRE Family Plasmid Maintenance System Antidote Protein; Helix-TurN-Helix Domain Protein
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSTATKPNHIGRKISRIRELRDMKQEALAQALGTNQQAISTIENSETIDEAKLIEIAKALGVTPEAIKSFSEENVFNYFN TFTDSHGNFGNFASGAICNFNPLDKVVELYERLVQVEKDKVEYLEKLMKGK
Sequences:
>Translated_131_residues MSTATKPNHIGRKISRIRELRDMKQEALAQALGTNQQAISTIENSETIDEAKLIEIAKALGVTPEAIKSFSEENVFNYFN TFTDSHGNFGNFASGAICNFNPLDKVVELYERLVQVEKDKVEYLEKLMKGK >Mature_130_residues STATKPNHIGRKISRIRELRDMKQEALAQALGTNQQAISTIENSETIDEAKLIEIAKALGVTPEAIKSFSEENVFNYFNT FTDSHGNFGNFASGAICNFNPLDKVVELYERLVQVEKDKVEYLEKLMKGK
Specific function: Unknown
COG id: COG2932
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14728; Mature: 14597
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTATKPNHIGRKISRIRELRDMKQEALAQALGTNQQAISTIENSETIDEAKLIEIAKAL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH GVTPEAIKSFSEENVFNYFNTFTDSHGNFGNFASGAICNFNPLDKVVELYERLVQVEKDK CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VEYLEKLMKGK HHHHHHHHCCC >Mature Secondary Structure STATKPNHIGRKISRIRELRDMKQEALAQALGTNQQAISTIENSETIDEAKLIEIAKAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH GVTPEAIKSFSEENVFNYFNTFTDSHGNFGNFASGAICNFNPLDKVVELYERLVQVEKDK CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VEYLEKLMKGK HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA