Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is yuxL [H]

Identifier: 146298399

GI number: 146298399

Start: 696808

End: 698709

Strand: Direct

Name: yuxL [H]

Synonym: Fjoh_0636

Alternate gene names: 146298399

Gene position: 696808-698709 (Clockwise)

Preceding gene: 146298395

Following gene: 146298400

Centisome position: 11.43

GC content: 37.33

Gene sequence:

>1902_bases
ATGAAAAAAGTATTATTAACAACCTTAATAATGATGAGTTTAAACGCTATCGGGCAGAATGTTATGTCTCCGGAATTGTT
ATGGAAATTAGGCAGAGTTACACCGCTTGGAATTTCTAAAGATGCAAAAAATGTAGTTTTTAAGGTTTCTACACCTTCTG
TAGAAGAAAACAAATCGCATTCTAAATTTTACACTATTCCTGTAAACGGGGGAAATGCAACCGAAATTAAAGATACAAAA
GACATTCTTGCTGATAAAAACATTTCTCCAGACGGAAAATATGTTGTGTACAACGAAGAAGTAAAAATTGATAAAGTTTT
AGGTAAAGATTTTTATCCAAAATTAGACAAATCTGATGCTCAAATTTATGATGGATTAGATTACCGTCATTGGGATACCT
GGAACGAAGGAAAATTTAATCACGTTTTTTATAAAGAAAACAAAGACGGCGCAAAAGGAATTGACATCCTGAAAGGTGAA
AATTTTGATTCTCCGCAAAAACCTTTTGGCGGTGACGAAGATTATATCTGGTCGCCAGACAGTAAAAGCATTTTTTATGT
GTGCAAGAAAAAAGCAGGAACTGCTTATGCGATTTCTACCAACACAGATATTTATGAGTACAATTTAGAAACTCAAAAAA
CAACCAATAAAACCGATGGCAATTTAGGTTACGATACAGCACCGCAGTTTTCTCCAACAGGAAATTTATCTTGGTTACAA
ATGAAACGCGACGGTTACGAGTCTGACAAAAACGATATCATTGTTGAGTTTAAAGGAATCAAAACAAATTTAACGGCAAA
CTGGGACGGAACTGTAGATAATTTCATCTGGAGTAAAGACGGAAAAACGGTGTTTTTTGTTGCGCCAATTGACGGAACAA
AACAACTTTTCTCTGTTAACTTTCCGGGGTTGACTAAAATCGCGATTCAAGTTCGTCAGTTAACAAACGGTGATTTTGAC
GTAAATGATTTAGTAGGTTTTTCTGGAGATGATATTATTGTTACCAGAACAGATATGAATCATGCTGGTGAGATTTTTTC
TTTTAATTTGAAGAAAAATACCTGGAAACAATTATCAAACGTAAATACTGATACTTATAAAACTTTAGCATTAAGCAAAA
CCGAAAAACGTTACGTTACAACAACTGACGGTAAAAAGATGCTGGTTTGGGTAATCCTACCTCCAAACTTTGATGCTTCT
AAAAAATATCCAACTTTATTATTCTGCCAAGGCGGACCTCAAAGCGCGTTGACACAATCGTATTCTTTCCGTTGGAATTT
CTCTTTAATGGCAGCAAAAGGGTATGTTGTTGTTGCTCCAAACCGCCGCGGAATGCCGGGTCATGGCGTTGAATGGAACG
AGCAGATTAGTAAAGACTGGGGCGGACAGGTTATGGACGATTACCTTTCGGCAATTGACGACGTTGCCAAAGAAAGTTAT
GTTGACAAAAGCCGTCTAGGATGCGTTGGTGCCAGCTACGGAGGATATTCTGTATTTTACTTAGCAGGAATTCACAACAA
TCGTTTTAAAACTTTTATCGCTCATGATGGTGTTTTCAATACGGTCTCAATGTTAGGAACAACTGAAGAAGTTTTCTTTA
ACAACTGGGATTTTGGCGGACCTTATTGGGAAAAAGACAATGCTGTGGCTCAAAAAGCTTACACAACTTTTAACCCGGCA
ACTTTGGTTCAAAACTGGAACAGACCAATTTTGATTTTCCAGGGAGGAAAAGATTTCCGTGTGCCAATCGGACAGGGACA
AGAAGCTTTTCAGGCAGCACAGTTAAGAGGAATTAAAAGCCGCTTTGTATATTTTCCAGATGAAAACCACTGGGTTCTGC
ATCCGCAAAATGCTCAGGTTTGGCAGGGAGAATTCTTTAAATGGCTGAACGAGACATTGTAA

Upstream 100 bases:

>100_bases
ATATCATTCAAAACTTTAACAATAATTGGGATTTGGAATTTAACAACTTGGGGCTTAAAAGTTGTATTTTTAGCGCACAA
AAAAATAGAATAATTTGATT

Downstream 100 bases:

>100_bases
AATCAAGAATTAAAATAAACTTAACCGCAGTATTAGTTATATAATCTGCGGTTATTTTATTTTTAGAACATTGGAATTAT
ATAAATATTTGGTTTATATT

Product: peptidase S9 prolyl oligopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 633; Mature: 633

Protein sequence:

>633_residues
MKKVLLTTLIMMSLNAIGQNVMSPELLWKLGRVTPLGISKDAKNVVFKVSTPSVEENKSHSKFYTIPVNGGNATEIKDTK
DILADKNISPDGKYVVYNEEVKIDKVLGKDFYPKLDKSDAQIYDGLDYRHWDTWNEGKFNHVFYKENKDGAKGIDILKGE
NFDSPQKPFGGDEDYIWSPDSKSIFYVCKKKAGTAYAISTNTDIYEYNLETQKTTNKTDGNLGYDTAPQFSPTGNLSWLQ
MKRDGYESDKNDIIVEFKGIKTNLTANWDGTVDNFIWSKDGKTVFFVAPIDGTKQLFSVNFPGLTKIAIQVRQLTNGDFD
VNDLVGFSGDDIIVTRTDMNHAGEIFSFNLKKNTWKQLSNVNTDTYKTLALSKTEKRYVTTTDGKKMLVWVILPPNFDAS
KKYPTLLFCQGGPQSALTQSYSFRWNFSLMAAKGYVVVAPNRRGMPGHGVEWNEQISKDWGGQVMDDYLSAIDDVAKESY
VDKSRLGCVGASYGGYSVFYLAGIHNNRFKTFIAHDGVFNTVSMLGTTEEVFFNNWDFGGPYWEKDNAVAQKAYTTFNPA
TLVQNWNRPILIFQGGKDFRVPIGQGQEAFQAAQLRGIKSRFVYFPDENHWVLHPQNAQVWQGEFFKWLNETL

Sequences:

>Translated_633_residues
MKKVLLTTLIMMSLNAIGQNVMSPELLWKLGRVTPLGISKDAKNVVFKVSTPSVEENKSHSKFYTIPVNGGNATEIKDTK
DILADKNISPDGKYVVYNEEVKIDKVLGKDFYPKLDKSDAQIYDGLDYRHWDTWNEGKFNHVFYKENKDGAKGIDILKGE
NFDSPQKPFGGDEDYIWSPDSKSIFYVCKKKAGTAYAISTNTDIYEYNLETQKTTNKTDGNLGYDTAPQFSPTGNLSWLQ
MKRDGYESDKNDIIVEFKGIKTNLTANWDGTVDNFIWSKDGKTVFFVAPIDGTKQLFSVNFPGLTKIAIQVRQLTNGDFD
VNDLVGFSGDDIIVTRTDMNHAGEIFSFNLKKNTWKQLSNVNTDTYKTLALSKTEKRYVTTTDGKKMLVWVILPPNFDAS
KKYPTLLFCQGGPQSALTQSYSFRWNFSLMAAKGYVVVAPNRRGMPGHGVEWNEQISKDWGGQVMDDYLSAIDDVAKESY
VDKSRLGCVGASYGGYSVFYLAGIHNNRFKTFIAHDGVFNTVSMLGTTEEVFFNNWDFGGPYWEKDNAVAQKAYTTFNPA
TLVQNWNRPILIFQGGKDFRVPIGQGQEAFQAAQLRGIKSRFVYFPDENHWVLHPQNAQVWQGEFFKWLNETL
>Mature_633_residues
MKKVLLTTLIMMSLNAIGQNVMSPELLWKLGRVTPLGISKDAKNVVFKVSTPSVEENKSHSKFYTIPVNGGNATEIKDTK
DILADKNISPDGKYVVYNEEVKIDKVLGKDFYPKLDKSDAQIYDGLDYRHWDTWNEGKFNHVFYKENKDGAKGIDILKGE
NFDSPQKPFGGDEDYIWSPDSKSIFYVCKKKAGTAYAISTNTDIYEYNLETQKTTNKTDGNLGYDTAPQFSPTGNLSWLQ
MKRDGYESDKNDIIVEFKGIKTNLTANWDGTVDNFIWSKDGKTVFFVAPIDGTKQLFSVNFPGLTKIAIQVRQLTNGDFD
VNDLVGFSGDDIIVTRTDMNHAGEIFSFNLKKNTWKQLSNVNTDTYKTLALSKTEKRYVTTTDGKKMLVWVILPPNFDAS
KKYPTLLFCQGGPQSALTQSYSFRWNFSLMAAKGYVVVAPNRRGMPGHGVEWNEQISKDWGGQVMDDYLSAIDDVAKESY
VDKSRLGCVGASYGGYSVFYLAGIHNNRFKTFIAHDGVFNTVSMLGTTEEVFFNNWDFGGPYWEKDNAVAQKAYTTFNPA
TLVQNWNRPILIFQGGKDFRVPIGQGQEAFQAAQLRGIKSRFVYFPDENHWVLHPQNAQVWQGEFFKWLNETL

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Homo sapiens, GI23510451, Length=225, Percent_Identity=26.2222222222222, Blast_Score=88, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI25149159, Length=519, Percent_Identity=22.9287090558767, Blast_Score=88, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17508019, Length=131, Percent_Identity=31.2977099236641, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17508017, Length=131, Percent_Identity=31.2977099236641, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24582257, Length=246, Percent_Identity=25.609756097561, Blast_Score=65, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 71608; Mature: 71608

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLLTTLIMMSLNAIGQNVMSPELLWKLGRVTPLGISKDAKNVVFKVSTPSVEENKSH
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
SKFYTIPVNGGNATEIKDTKDILADKNISPDGKYVVYNEEVKIDKVLGKDFYPKLDKSDA
CEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCEEEECCCEEEEHHHCCCCCCCCCCCCC
QIYDGLDYRHWDTWNEGKFNHVFYKENKDGAKGIDILKGENFDSPQKPFGGDEDYIWSPD
HHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCC
SKSIFYVCKKKAGTAYAISTNTDIYEYNLETQKTTNKTDGNLGYDTAPQFSPTGNLSWLQ
CCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
MKRDGYESDKNDIIVEFKGIKTNLTANWDGTVDNFIWSKDGKTVFFVAPIDGTKQLFSVN
EECCCCCCCCCCEEEEEECCEEEEEECCCCCHHCEEECCCCCEEEEEECCCCCCEEEEEC
FPGLTKIAIQVRQLTNGDFDVNDLVGFSGDDIIVTRTDMNHAGEIFSFNLKKNTWKQLSN
CCCCEEEEEEEEECCCCCCCHHHHCCCCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHC
VNTDTYKTLALSKTEKRYVTTTDGKKMLVWVILPPNFDASKKYPTLLFCQGGPQSALTQS
CCCCCEEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCHHHHCC
YSFRWNFSLMAAKGYVVVAPNRRGMPGHGVEWNEQISKDWGGQVMDDYLSAIDDVAKESY
EEEEEEEEEEEECCEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VDKSRLGCVGASYGGYSVFYLAGIHNNRFKTFIAHDGVFNTVSMLGTTEEVFFNNWDFGG
CCHHHCCEEECCCCCEEEEEEEEECCCCEEEEEECCCHHHHHHHHCCCHHHEECCCCCCC
PYWEKDNAVAQKAYTTFNPATLVQNWNRPILIFQGGKDFRVPIGQGQEAFQAAQLRGIKS
CCCCCCCHHHHHHHCCCCCHHHHHCCCCCEEEEECCCEEEEECCCCHHHHHHHHHCCCCE
RFVYFPDENHWVLHPQNAQVWQGEFFKWLNETL
EEEECCCCCEEEEECCCCCEECHHHHHHHHHCC
>Mature Secondary Structure
MKKVLLTTLIMMSLNAIGQNVMSPELLWKLGRVTPLGISKDAKNVVFKVSTPSVEENKSH
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
SKFYTIPVNGGNATEIKDTKDILADKNISPDGKYVVYNEEVKIDKVLGKDFYPKLDKSDA
CEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCEEEECCCEEEEHHHCCCCCCCCCCCCC
QIYDGLDYRHWDTWNEGKFNHVFYKENKDGAKGIDILKGENFDSPQKPFGGDEDYIWSPD
HHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCC
SKSIFYVCKKKAGTAYAISTNTDIYEYNLETQKTTNKTDGNLGYDTAPQFSPTGNLSWLQ
CCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
MKRDGYESDKNDIIVEFKGIKTNLTANWDGTVDNFIWSKDGKTVFFVAPIDGTKQLFSVN
EECCCCCCCCCCEEEEEECCEEEEEECCCCCHHCEEECCCCCEEEEEECCCCCCEEEEEC
FPGLTKIAIQVRQLTNGDFDVNDLVGFSGDDIIVTRTDMNHAGEIFSFNLKKNTWKQLSN
CCCCEEEEEEEEECCCCCCCHHHHCCCCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHC
VNTDTYKTLALSKTEKRYVTTTDGKKMLVWVILPPNFDASKKYPTLLFCQGGPQSALTQS
CCCCCEEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCHHHHCC
YSFRWNFSLMAAKGYVVVAPNRRGMPGHGVEWNEQISKDWGGQVMDDYLSAIDDVAKESY
EEEEEEEEEEEECCEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VDKSRLGCVGASYGGYSVFYLAGIHNNRFKTFIAHDGVFNTVSMLGTTEEVFFNNWDFGG
CCHHHCCEEECCCCCEEEEEEEEECCCCEEEEEECCCHHHHHHHHCCCHHHEECCCCCCC
PYWEKDNAVAQKAYTTFNPATLVQNWNRPILIFQGGKDFRVPIGQGQEAFQAAQLRGIKS
CCCCCCCHHHHHHHCCCCCHHHHHCCCCCEEEEECCCEEEEECCCCHHHHHHHHHCCCCE
RFVYFPDENHWVLHPQNAQVWQGEFFKWLNETL
EEEECCCCCEEEEECCCCCEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]