| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yuxL [H]
Identifier: 146298399
GI number: 146298399
Start: 696808
End: 698709
Strand: Direct
Name: yuxL [H]
Synonym: Fjoh_0636
Alternate gene names: 146298399
Gene position: 696808-698709 (Clockwise)
Preceding gene: 146298395
Following gene: 146298400
Centisome position: 11.43
GC content: 37.33
Gene sequence:
>1902_bases ATGAAAAAAGTATTATTAACAACCTTAATAATGATGAGTTTAAACGCTATCGGGCAGAATGTTATGTCTCCGGAATTGTT ATGGAAATTAGGCAGAGTTACACCGCTTGGAATTTCTAAAGATGCAAAAAATGTAGTTTTTAAGGTTTCTACACCTTCTG TAGAAGAAAACAAATCGCATTCTAAATTTTACACTATTCCTGTAAACGGGGGAAATGCAACCGAAATTAAAGATACAAAA GACATTCTTGCTGATAAAAACATTTCTCCAGACGGAAAATATGTTGTGTACAACGAAGAAGTAAAAATTGATAAAGTTTT AGGTAAAGATTTTTATCCAAAATTAGACAAATCTGATGCTCAAATTTATGATGGATTAGATTACCGTCATTGGGATACCT GGAACGAAGGAAAATTTAATCACGTTTTTTATAAAGAAAACAAAGACGGCGCAAAAGGAATTGACATCCTGAAAGGTGAA AATTTTGATTCTCCGCAAAAACCTTTTGGCGGTGACGAAGATTATATCTGGTCGCCAGACAGTAAAAGCATTTTTTATGT GTGCAAGAAAAAAGCAGGAACTGCTTATGCGATTTCTACCAACACAGATATTTATGAGTACAATTTAGAAACTCAAAAAA CAACCAATAAAACCGATGGCAATTTAGGTTACGATACAGCACCGCAGTTTTCTCCAACAGGAAATTTATCTTGGTTACAA ATGAAACGCGACGGTTACGAGTCTGACAAAAACGATATCATTGTTGAGTTTAAAGGAATCAAAACAAATTTAACGGCAAA CTGGGACGGAACTGTAGATAATTTCATCTGGAGTAAAGACGGAAAAACGGTGTTTTTTGTTGCGCCAATTGACGGAACAA AACAACTTTTCTCTGTTAACTTTCCGGGGTTGACTAAAATCGCGATTCAAGTTCGTCAGTTAACAAACGGTGATTTTGAC GTAAATGATTTAGTAGGTTTTTCTGGAGATGATATTATTGTTACCAGAACAGATATGAATCATGCTGGTGAGATTTTTTC TTTTAATTTGAAGAAAAATACCTGGAAACAATTATCAAACGTAAATACTGATACTTATAAAACTTTAGCATTAAGCAAAA CCGAAAAACGTTACGTTACAACAACTGACGGTAAAAAGATGCTGGTTTGGGTAATCCTACCTCCAAACTTTGATGCTTCT AAAAAATATCCAACTTTATTATTCTGCCAAGGCGGACCTCAAAGCGCGTTGACACAATCGTATTCTTTCCGTTGGAATTT CTCTTTAATGGCAGCAAAAGGGTATGTTGTTGTTGCTCCAAACCGCCGCGGAATGCCGGGTCATGGCGTTGAATGGAACG AGCAGATTAGTAAAGACTGGGGCGGACAGGTTATGGACGATTACCTTTCGGCAATTGACGACGTTGCCAAAGAAAGTTAT GTTGACAAAAGCCGTCTAGGATGCGTTGGTGCCAGCTACGGAGGATATTCTGTATTTTACTTAGCAGGAATTCACAACAA TCGTTTTAAAACTTTTATCGCTCATGATGGTGTTTTCAATACGGTCTCAATGTTAGGAACAACTGAAGAAGTTTTCTTTA ACAACTGGGATTTTGGCGGACCTTATTGGGAAAAAGACAATGCTGTGGCTCAAAAAGCTTACACAACTTTTAACCCGGCA ACTTTGGTTCAAAACTGGAACAGACCAATTTTGATTTTCCAGGGAGGAAAAGATTTCCGTGTGCCAATCGGACAGGGACA AGAAGCTTTTCAGGCAGCACAGTTAAGAGGAATTAAAAGCCGCTTTGTATATTTTCCAGATGAAAACCACTGGGTTCTGC ATCCGCAAAATGCTCAGGTTTGGCAGGGAGAATTCTTTAAATGGCTGAACGAGACATTGTAA
Upstream 100 bases:
>100_bases ATATCATTCAAAACTTTAACAATAATTGGGATTTGGAATTTAACAACTTGGGGCTTAAAAGTTGTATTTTTAGCGCACAA AAAAATAGAATAATTTGATT
Downstream 100 bases:
>100_bases AATCAAGAATTAAAATAAACTTAACCGCAGTATTAGTTATATAATCTGCGGTTATTTTATTTTTAGAACATTGGAATTAT ATAAATATTTGGTTTATATT
Product: peptidase S9 prolyl oligopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 633; Mature: 633
Protein sequence:
>633_residues MKKVLLTTLIMMSLNAIGQNVMSPELLWKLGRVTPLGISKDAKNVVFKVSTPSVEENKSHSKFYTIPVNGGNATEIKDTK DILADKNISPDGKYVVYNEEVKIDKVLGKDFYPKLDKSDAQIYDGLDYRHWDTWNEGKFNHVFYKENKDGAKGIDILKGE NFDSPQKPFGGDEDYIWSPDSKSIFYVCKKKAGTAYAISTNTDIYEYNLETQKTTNKTDGNLGYDTAPQFSPTGNLSWLQ MKRDGYESDKNDIIVEFKGIKTNLTANWDGTVDNFIWSKDGKTVFFVAPIDGTKQLFSVNFPGLTKIAIQVRQLTNGDFD VNDLVGFSGDDIIVTRTDMNHAGEIFSFNLKKNTWKQLSNVNTDTYKTLALSKTEKRYVTTTDGKKMLVWVILPPNFDAS KKYPTLLFCQGGPQSALTQSYSFRWNFSLMAAKGYVVVAPNRRGMPGHGVEWNEQISKDWGGQVMDDYLSAIDDVAKESY VDKSRLGCVGASYGGYSVFYLAGIHNNRFKTFIAHDGVFNTVSMLGTTEEVFFNNWDFGGPYWEKDNAVAQKAYTTFNPA TLVQNWNRPILIFQGGKDFRVPIGQGQEAFQAAQLRGIKSRFVYFPDENHWVLHPQNAQVWQGEFFKWLNETL
Sequences:
>Translated_633_residues MKKVLLTTLIMMSLNAIGQNVMSPELLWKLGRVTPLGISKDAKNVVFKVSTPSVEENKSHSKFYTIPVNGGNATEIKDTK DILADKNISPDGKYVVYNEEVKIDKVLGKDFYPKLDKSDAQIYDGLDYRHWDTWNEGKFNHVFYKENKDGAKGIDILKGE NFDSPQKPFGGDEDYIWSPDSKSIFYVCKKKAGTAYAISTNTDIYEYNLETQKTTNKTDGNLGYDTAPQFSPTGNLSWLQ MKRDGYESDKNDIIVEFKGIKTNLTANWDGTVDNFIWSKDGKTVFFVAPIDGTKQLFSVNFPGLTKIAIQVRQLTNGDFD VNDLVGFSGDDIIVTRTDMNHAGEIFSFNLKKNTWKQLSNVNTDTYKTLALSKTEKRYVTTTDGKKMLVWVILPPNFDAS KKYPTLLFCQGGPQSALTQSYSFRWNFSLMAAKGYVVVAPNRRGMPGHGVEWNEQISKDWGGQVMDDYLSAIDDVAKESY VDKSRLGCVGASYGGYSVFYLAGIHNNRFKTFIAHDGVFNTVSMLGTTEEVFFNNWDFGGPYWEKDNAVAQKAYTTFNPA TLVQNWNRPILIFQGGKDFRVPIGQGQEAFQAAQLRGIKSRFVYFPDENHWVLHPQNAQVWQGEFFKWLNETL >Mature_633_residues MKKVLLTTLIMMSLNAIGQNVMSPELLWKLGRVTPLGISKDAKNVVFKVSTPSVEENKSHSKFYTIPVNGGNATEIKDTK DILADKNISPDGKYVVYNEEVKIDKVLGKDFYPKLDKSDAQIYDGLDYRHWDTWNEGKFNHVFYKENKDGAKGIDILKGE NFDSPQKPFGGDEDYIWSPDSKSIFYVCKKKAGTAYAISTNTDIYEYNLETQKTTNKTDGNLGYDTAPQFSPTGNLSWLQ MKRDGYESDKNDIIVEFKGIKTNLTANWDGTVDNFIWSKDGKTVFFVAPIDGTKQLFSVNFPGLTKIAIQVRQLTNGDFD VNDLVGFSGDDIIVTRTDMNHAGEIFSFNLKKNTWKQLSNVNTDTYKTLALSKTEKRYVTTTDGKKMLVWVILPPNFDAS KKYPTLLFCQGGPQSALTQSYSFRWNFSLMAAKGYVVVAPNRRGMPGHGVEWNEQISKDWGGQVMDDYLSAIDDVAKESY VDKSRLGCVGASYGGYSVFYLAGIHNNRFKTFIAHDGVFNTVSMLGTTEEVFFNNWDFGGPYWEKDNAVAQKAYTTFNPA TLVQNWNRPILIFQGGKDFRVPIGQGQEAFQAAQLRGIKSRFVYFPDENHWVLHPQNAQVWQGEFFKWLNETL
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI23510451, Length=225, Percent_Identity=26.2222222222222, Blast_Score=88, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25149159, Length=519, Percent_Identity=22.9287090558767, Blast_Score=88, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17508019, Length=131, Percent_Identity=31.2977099236641, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17508017, Length=131, Percent_Identity=31.2977099236641, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24582257, Length=246, Percent_Identity=25.609756097561, Blast_Score=65, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 71608; Mature: 71608
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLLTTLIMMSLNAIGQNVMSPELLWKLGRVTPLGISKDAKNVVFKVSTPSVEENKSH CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCC SKFYTIPVNGGNATEIKDTKDILADKNISPDGKYVVYNEEVKIDKVLGKDFYPKLDKSDA CEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCEEEECCCEEEEHHHCCCCCCCCCCCCC QIYDGLDYRHWDTWNEGKFNHVFYKENKDGAKGIDILKGENFDSPQKPFGGDEDYIWSPD HHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCC SKSIFYVCKKKAGTAYAISTNTDIYEYNLETQKTTNKTDGNLGYDTAPQFSPTGNLSWLQ CCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE MKRDGYESDKNDIIVEFKGIKTNLTANWDGTVDNFIWSKDGKTVFFVAPIDGTKQLFSVN EECCCCCCCCCCEEEEEECCEEEEEECCCCCHHCEEECCCCCEEEEEECCCCCCEEEEEC FPGLTKIAIQVRQLTNGDFDVNDLVGFSGDDIIVTRTDMNHAGEIFSFNLKKNTWKQLSN CCCCEEEEEEEEECCCCCCCHHHHCCCCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHC VNTDTYKTLALSKTEKRYVTTTDGKKMLVWVILPPNFDASKKYPTLLFCQGGPQSALTQS CCCCCEEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCHHHHCC YSFRWNFSLMAAKGYVVVAPNRRGMPGHGVEWNEQISKDWGGQVMDDYLSAIDDVAKESY EEEEEEEEEEEECCEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VDKSRLGCVGASYGGYSVFYLAGIHNNRFKTFIAHDGVFNTVSMLGTTEEVFFNNWDFGG CCHHHCCEEECCCCCEEEEEEEEECCCCEEEEEECCCHHHHHHHHCCCHHHEECCCCCCC PYWEKDNAVAQKAYTTFNPATLVQNWNRPILIFQGGKDFRVPIGQGQEAFQAAQLRGIKS CCCCCCCHHHHHHHCCCCCHHHHHCCCCCEEEEECCCEEEEECCCCHHHHHHHHHCCCCE RFVYFPDENHWVLHPQNAQVWQGEFFKWLNETL EEEECCCCCEEEEECCCCCEECHHHHHHHHHCC >Mature Secondary Structure MKKVLLTTLIMMSLNAIGQNVMSPELLWKLGRVTPLGISKDAKNVVFKVSTPSVEENKSH CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCC SKFYTIPVNGGNATEIKDTKDILADKNISPDGKYVVYNEEVKIDKVLGKDFYPKLDKSDA CEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCEEEECCCEEEEHHHCCCCCCCCCCCCC QIYDGLDYRHWDTWNEGKFNHVFYKENKDGAKGIDILKGENFDSPQKPFGGDEDYIWSPD HHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCC SKSIFYVCKKKAGTAYAISTNTDIYEYNLETQKTTNKTDGNLGYDTAPQFSPTGNLSWLQ CCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE MKRDGYESDKNDIIVEFKGIKTNLTANWDGTVDNFIWSKDGKTVFFVAPIDGTKQLFSVN EECCCCCCCCCCEEEEEECCEEEEEECCCCCHHCEEECCCCCEEEEEECCCCCCEEEEEC FPGLTKIAIQVRQLTNGDFDVNDLVGFSGDDIIVTRTDMNHAGEIFSFNLKKNTWKQLSN CCCCEEEEEEEEECCCCCCCHHHHCCCCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHC VNTDTYKTLALSKTEKRYVTTTDGKKMLVWVILPPNFDASKKYPTLLFCQGGPQSALTQS CCCCCEEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCHHHHCC YSFRWNFSLMAAKGYVVVAPNRRGMPGHGVEWNEQISKDWGGQVMDDYLSAIDDVAKESY EEEEEEEEEEEECCEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VDKSRLGCVGASYGGYSVFYLAGIHNNRFKTFIAHDGVFNTVSMLGTTEEVFFNNWDFGG CCHHHCCEEECCCCCEEEEEEEEECCCCEEEEEECCCHHHHHHHHCCCHHHEECCCCCCC PYWEKDNAVAQKAYTTFNPATLVQNWNRPILIFQGGKDFRVPIGQGQEAFQAAQLRGIKS CCCCCCCHHHHHHHCCCCCHHHHHCCCCCEEEEECCCEEEEECCCCHHHHHHHHHCCCCE RFVYFPDENHWVLHPQNAQVWQGEFFKWLNETL EEEECCCCCEEEEECCCCCEECHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]