| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298385
Identifier: 146298385
GI number: 146298385
Start: 684364
End: 684873
Strand: Direct
Name: 146298385
Synonym: Fjoh_0622
Alternate gene names: NA
Gene position: 684364-684873 (Clockwise)
Preceding gene: 146298384
Following gene: 146298386
Centisome position: 11.22
GC content: 29.8
Gene sequence:
>510_bases ATGGCAAAAAAGAAAATAAATATTGTATTAATAATTGTAGTTATTGCACTCTGGGGAGCTGTTTTTTATAAAACCGTATA CAAGTATTTTTCTTCACAGGAAACATTTGCAAATGAAACTTACACGGCACAAAATGTAAAATTTAACCAGATACATAAAG ACACATTTGCATTAGAAACTATTACAAGAGATCCGTTTTTAAATAAACAGACTCAGCAAGTTGTTATTCCTGCACAAAAA CAATACAGCGCAGTTACTTCTACAGCAGTAAAAAAAACAGCAGCGCCAATTGCTAAAACAAGACAATTAACAATTTGGCC TGCAATATCTTACCATGGATATATAAAAGATTCGAAAGGGGAACTCGTTATAATGAAAATCGACAATAAAATGTATCGTT TGCGAAAAGATGCTCTAATTGATGGAATAGCACTTAAAAAAATAACTCGTGATTCATTAGAATTAGATTTTAATAGAGAA AGAAAAATAATTGCTCGTTTTAAAATTTAA
Upstream 100 bases:
>100_bases ACAACCGGCGATTATTACTGGCGAATTAAAACAACAGATGCTGCCGGAAATGTAAGTGCATATAGTACTCCTTTCAAATT TACTGTAATCTAAAATAGAG
Downstream 100 bases:
>100_bases TTCACTCCTTCATACTCTTACTTTTCATTAGCAGAATCTTCAGCATCTACATCGGCTTTTTCAGCTTTTTTGAAATCATT ATTCAGTAAGTCTGTTAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MAKKKINIVLIIVVIALWGAVFYKTVYKYFSSQETFANETYTAQNVKFNQIHKDTFALETITRDPFLNKQTQQVVIPAQK QYSAVTSTAVKKTAAPIAKTRQLTIWPAISYHGYIKDSKGELVIMKIDNKMYRLRKDALIDGIALKKITRDSLELDFNRE RKIIARFKI
Sequences:
>Translated_169_residues MAKKKINIVLIIVVIALWGAVFYKTVYKYFSSQETFANETYTAQNVKFNQIHKDTFALETITRDPFLNKQTQQVVIPAQK QYSAVTSTAVKKTAAPIAKTRQLTIWPAISYHGYIKDSKGELVIMKIDNKMYRLRKDALIDGIALKKITRDSLELDFNRE RKIIARFKI >Mature_168_residues AKKKINIVLIIVVIALWGAVFYKTVYKYFSSQETFANETYTAQNVKFNQIHKDTFALETITRDPFLNKQTQQVVIPAQKQ YSAVTSTAVKKTAAPIAKTRQLTIWPAISYHGYIKDSKGELVIMKIDNKMYRLRKDALIDGIALKKITRDSLELDFNRER KIIARFKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19507; Mature: 19376
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKKINIVLIIVVIALWGAVFYKTVYKYFSSQETFANETYTAQNVKFNQIHKDTFALET CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEECCCCHHHHHCHHHHHHH ITRDPFLNKQTQQVVIPAQKQYSAVTSTAVKKTAAPIAKTRQLTIWPAISYHGYIKDSKG HCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCHHHCCEEEEEEEECCCCEEECCCC ELVIMKIDNKMYRLRKDALIDGIALKKITRDSLELDFNRERKIIARFKI CEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEEECC >Mature Secondary Structure AKKKINIVLIIVVIALWGAVFYKTVYKYFSSQETFANETYTAQNVKFNQIHKDTFALET CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEECCCCHHHHHCHHHHHHH ITRDPFLNKQTQQVVIPAQKQYSAVTSTAVKKTAAPIAKTRQLTIWPAISYHGYIKDSKG HCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCHHHCCEEEEEEEECCCCEEECCCC ELVIMKIDNKMYRLRKDALIDGIALKKITRDSLELDFNRERKIIARFKI CEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA