Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146298384

Identifier: 146298384

GI number: 146298384

Start: 683400

End: 684356

Strand: Direct

Name: 146298384

Synonym: Fjoh_0621

Alternate gene names: NA

Gene position: 683400-684356 (Clockwise)

Preceding gene: 146298383

Following gene: 146298385

Centisome position: 11.21

GC content: 35.63

Gene sequence:

>957_bases
ATGAAAACAATAAATAAACTTATACTTATTCTTCTTTCTCTAACCGTTATCTCTTGCGAAGATATTTTTGAAGAAGATAT
TTCCGACGACACAATCGAAACAGTTTCTCCAAAAGATAATACAGTTATTGAAAGTAACGTAGTTAATTTTCAGTGGGATG
AGCTTGACGGAGCAAAAAAATATCGTGTTCAGGTTTTGGATTTAGATGAAACTGTAGTGCTTGATTCCTTAGTTACCAAA
ACAAGTTTTCTATGCCCTTTATCCCCAGGAAACTATCAATGGAAAGTAAGAGGTGAAAATTTTGCTTATGAGTCAAACTA
TTCATTTTCTTCAACATTTTCAGTTGTTACTACAAGTGATTTAGCAAATCAACAAGTAATTTTATCAACGCCAGACAGCA
ACATTTACAAAAACACAGCCAGTATTACACTAAAGTGGCAAAAGCTTGCAGCCGCTACAGGTTATAATGTAGAAGTTCTA
AATACAACAACAGGAGAATCTGTCTATGCTGAAGAAAATTTAACCGCAACTTCAGTAGCTTTAACCAGTACGCAGCTTAG
TAAGGATGCAACTTATCAATGGAAAGTAAGAGGTGTAAACAGTACAAGCCAGACATTGGTATTTTCTACCAGAAATTTCC
ATATTGATACTGTTACCCCGCCGGTGCCTCAAAACAGCCTGCCTGCTAATAATGCTGTCGTTACCAATAATCAGTCAGCA
TCTTTTAATTGGATTTCACCAACAGACACCGGAACTATACAATCGCCAATAGTGTACACGATAGAATTTTCAAGTACAAA
TACCTTTACGACCCTATTATCGTCAACAAATAATGCGACAACATCGTATCAGCAAATATTTACTACAACCGGCGATTATT
ACTGGCGAATTAAAACAACAGATGCTGCCGGAAATGTAAGTGCATATAGTACTCCTTTCAAATTTACTGTAATCTAA

Upstream 100 bases:

>100_bases
AAAAAATTCGACTATTCAAGAATTGTCAGCATGAACTTCTATACTACCAAGAAAAACAATACATCCGAAGTTTTACACTT
AAAAATGATTTTTCAAAATT

Downstream 100 bases:

>100_bases
AATAGAGATGGCAAAAAAGAAAATAAATATTGTATTAATAATTGTAGTTATTGCACTCTGGGGAGCTGTTTTTTATAAAA
CCGTATACAAGTATTTTTCT

Product: fibronectin, type III domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKTINKLILILLSLTVISCEDIFEEDISDDTIETVSPKDNTVIESNVVNFQWDELDGAKKYRVQVLDLDETVVLDSLVTK
TSFLCPLSPGNYQWKVRGENFAYESNYSFSSTFSVVTTSDLANQQVILSTPDSNIYKNTASITLKWQKLAAATGYNVEVL
NTTTGESVYAEENLTATSVALTSTQLSKDATYQWKVRGVNSTSQTLVFSTRNFHIDTVTPPVPQNSLPANNAVVTNNQSA
SFNWISPTDTGTIQSPIVYTIEFSSTNTFTTLLSSTNNATTSYQQIFTTTGDYYWRIKTTDAAGNVSAYSTPFKFTVI

Sequences:

>Translated_318_residues
MKTINKLILILLSLTVISCEDIFEEDISDDTIETVSPKDNTVIESNVVNFQWDELDGAKKYRVQVLDLDETVVLDSLVTK
TSFLCPLSPGNYQWKVRGENFAYESNYSFSSTFSVVTTSDLANQQVILSTPDSNIYKNTASITLKWQKLAAATGYNVEVL
NTTTGESVYAEENLTATSVALTSTQLSKDATYQWKVRGVNSTSQTLVFSTRNFHIDTVTPPVPQNSLPANNAVVTNNQSA
SFNWISPTDTGTIQSPIVYTIEFSSTNTFTTLLSSTNNATTSYQQIFTTTGDYYWRIKTTDAAGNVSAYSTPFKFTVI
>Mature_318_residues
MKTINKLILILLSLTVISCEDIFEEDISDDTIETVSPKDNTVIESNVVNFQWDELDGAKKYRVQVLDLDETVVLDSLVTK
TSFLCPLSPGNYQWKVRGENFAYESNYSFSSTFSVVTTSDLANQQVILSTPDSNIYKNTASITLKWQKLAAATGYNVEVL
NTTTGESVYAEENLTATSVALTSTQLSKDATYQWKVRGVNSTSQTLVFSTRNFHIDTVTPPVPQNSLPANNAVVTNNQSA
SFNWISPTDTGTIQSPIVYTIEFSSTNTFTTLLSSTNNATTSYQQIFTTTGDYYWRIKTTDAAGNVSAYSTPFKFTVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35167; Mature: 35167

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50853 FN3 L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTINKLILILLSLTVISCEDIFEEDISDDTIETVSPKDNTVIESNVVNFQWDELDGAKK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCEEEEEECCCCCCCE
YRVQVLDLDETVVLDSLVTKTSFLCPLSPGNYQWKVRGENFAYESNYSFSSTFSVVTTSD
EEEEEEECCCHHHHHHHHHHHEEEEECCCCCEEEEECCCCEEEECCCCCCCEEEEEEECC
LANQQVILSTPDSNIYKNTASITLKWQKLAAATGYNVEVLNTTTGESVYAEENLTATSVA
CCCCEEEEECCCCCCEECEEEEEEEEEEEEECCCCEEEEEECCCCCEEEECCCCEEEEEE
LTSTQLSKDATYQWKVRGVNSTSQTLVFSTRNFHIDTVTPPVPQNSLPANNAVVTNNQSA
EEEHHCCCCCEEEEEEEECCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCEEEECCCCC
SFNWISPTDTGTIQSPIVYTIEFSSTNTFTTLLSSTNNATTSYQQIFTTTGDYYWRIKTT
EEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEECCCEEEEEEEC
DAAGNVSAYSTPFKFTVI
CCCCCCCEECCCEEEEEC
>Mature Secondary Structure
MKTINKLILILLSLTVISCEDIFEEDISDDTIETVSPKDNTVIESNVVNFQWDELDGAKK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCEEEEEECCCCCCCE
YRVQVLDLDETVVLDSLVTKTSFLCPLSPGNYQWKVRGENFAYESNYSFSSTFSVVTTSD
EEEEEEECCCHHHHHHHHHHHEEEEECCCCCEEEEECCCCEEEECCCCCCCEEEEEEECC
LANQQVILSTPDSNIYKNTASITLKWQKLAAATGYNVEVLNTTTGESVYAEENLTATSVA
CCCCEEEEECCCCCCEECEEEEEEEEEEEEECCCCEEEEEECCCCCEEEECCCCEEEEEE
LTSTQLSKDATYQWKVRGVNSTSQTLVFSTRNFHIDTVTPPVPQNSLPANNAVVTNNQSA
EEEHHCCCCCEEEEEEEECCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCEEEECCCCC
SFNWISPTDTGTIQSPIVYTIEFSSTNTFTTLLSSTNNATTSYQQIFTTTGDYYWRIKTT
EEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEECCCEEEEEEEC
DAAGNVSAYSTPFKFTVI
CCCCCCCEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA