| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146284465
Identifier: 146284465
GI number: 146284465
Start: 4507636
End: 4508061
Strand: Direct
Name: 146284465
Synonym: PST_4154
Alternate gene names: NA
Gene position: 4507636-4508061 (Clockwise)
Preceding gene: 146284463
Following gene: 146284467
Centisome position: 98.69
GC content: 66.2
Gene sequence:
>426_bases ATGACGCTTTCGCCCTTCCATCTCGCCATTCCCGTTTACGATCTGGCCGCCGCCCGCGCCTTCTACGGCGAGGCGTTCGG CTGTGCCGAGGGCCGCAGCAGCGATCACTGGGTGGATTTCGATTTCTTCGGCCACCAGCTGGTGATCCACGAGGCGCCGA AGATGCCGCATCAGGAGGCGGCGCACAGCAATCCGGTGGATGGCCACGACGTGCCGGTGCCGCACTTCGGCGTGGTACTC GGCTGGGAGCAATGGGAGGCGCTGGCCGAGCGGCTGAAGGCGCGCGGCACGCGCTTCGTGATCGAGCCCTACGTGCGCTT CCAGGGCCAGGTCGGCGAACAGGCGACCATGTTCCTGCTCGACCCCTGCGGCAACGCCCTGGAGTTCAAGGCGTTCAAGG ACATCGGCCAGCTGTTCGCCAAGTGA
Upstream 100 bases:
>100_bases ATCAAGGCGCTTCTGCCGGGCTGAAGCCCACCGGCGATGCTCGGTACGGCCAGAAAGCCTCTACACTCGAAACGTCTTGC CATTTCCGGAGTACGACCCG
Downstream 100 bases:
>100_bases GCGGGATCAGCCGCGCTCGGCGAGGTGCTGGTCCTTGAGCTTGACGTAGTTGCCAGCGGTATAGCTGAAGAAGCTGCGCT CCTTGTCGGTCAGCGGGCGC
Product: ring-cleaving dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Ring-Cleaving Dioxygenase; Dioxygenase; Extradiol Dioxygenase Family Protein; Dioxygenase/Glyoxalase; Glyoxalase Domain Protein; Glyoxalase/Extradiol Ring-Cleavage Dioxygenase; Glyoxalase/Bleomycin Resistance Family Protein; Dioxygenase Of Extradiol Dioxygenase Family Protein; Glyoxalase/Bleomycin Resistance Protein; Dioxygenase Protein; Glyoxalase; Glyoxalase/Bleomycin Resistance; Extradiol Family Dioxygenase; Extradiol Dioxygenase; Lactoylglutathione Lyase Protein
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MTLSPFHLAIPVYDLAAARAFYGEAFGCAEGRSSDHWVDFDFFGHQLVIHEAPKMPHQEAAHSNPVDGHDVPVPHFGVVL GWEQWEALAERLKARGTRFVIEPYVRFQGQVGEQATMFLLDPCGNALEFKAFKDIGQLFAK
Sequences:
>Translated_141_residues MTLSPFHLAIPVYDLAAARAFYGEAFGCAEGRSSDHWVDFDFFGHQLVIHEAPKMPHQEAAHSNPVDGHDVPVPHFGVVL GWEQWEALAERLKARGTRFVIEPYVRFQGQVGEQATMFLLDPCGNALEFKAFKDIGQLFAK >Mature_140_residues TLSPFHLAIPVYDLAAARAFYGEAFGCAEGRSSDHWVDFDFFGHQLVIHEAPKMPHQEAAHSNPVDGHDVPVPHFGVVLG WEQWEALAERLKARGTRFVIEPYVRFQGQVGEQATMFLLDPCGNALEFKAFKDIGQLFAK
Specific function: Unknown
COG id: COG3565
COG function: function code R; Predicted dioxygenase of extradiol dioxygenase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15798; Mature: 15667
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSPFHLAIPVYDLAAARAFYGEAFGCAEGRSSDHWVDFDFFGHQLVIHEAPKMPHQEA CCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCHH AHSNPVDGHDVPVPHFGVVLGWEQWEALAERLKARGTRFVIEPYVRFQGQVGEQATMFLL CCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCCEEEEEE DPCGNALEFKAFKDIGQLFAK CCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure TLSPFHLAIPVYDLAAARAFYGEAFGCAEGRSSDHWVDFDFFGHQLVIHEAPKMPHQEA CCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCHH AHSNPVDGHDVPVPHFGVVLGWEQWEALAERLKARGTRFVIEPYVRFQGQVGEQATMFLL CCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCCEEEEEE DPCGNALEFKAFKDIGQLFAK CCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA