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The map label for this gene is 146284411

Identifier: 146284411

GI number: 146284411

Start: 4453760

End: 4454290

Strand: Direct

Name: 146284411

Synonym: PST_4100

Alternate gene names: NA

Gene position: 4453760-4454290 (Clockwise)

Preceding gene: 146284410

Following gene: 146284412

Centisome position: 97.51

GC content: 66.1

Gene sequence:

>531_bases
GTGATCAGCCTGTTACCCTCGCCGGCCCCAACCGAAGCGATCGCTCCCATGCTGCGCTGTGTACTCGCCGCCCTGCTGCT
CACCGCCCTTCCCGCGTCCGCGCAAACAACCGACTGCCGGGTGATCGGCATTGCCGATGGCAACGTCTTCAGTTGCCGTA
CCGCCGAGGGCGATCGGCTCAGGGTACGGATGGCCGAGATCGATGCACCGGAGCTCAAGCAGCCGTATGGCGCCCAGGCC
CGTCAGGCACTTTCCGGCTATGTGTTCGGCAAGAACGTTCAGCTCACGGTCCAGGGTCGCGACGACCAGGGGCGAACCCT
GGCTCGCGTCAGGGCCGGGGACACCGACGTCAACGCCGAGATGGTCCGAACCGGCACTGCCTGGGCATATCGTGCTCAAC
TGAAGGACCGCGCCCTGCTCGATCTCGAGGCGGTCGCCCGGGAGTTCAAGCGGGGCCTCTGGGCGTTGCACAAGACCGAA
CAGCAACCGCCATGGGAATGGCGCAAGGAAATGCGCAGCGCCAGGCGCTAG

Upstream 100 bases:

>100_bases
TGCAATTCAGCCGAATCGGCTGCACAGCCAATGGGATTCTTCCGCGCAGCTGCCGCCGGGGCCCAACGTGACCACCTGAG
ACCTGGCTCCGGTTCGGCCG

Downstream 100 bases:

>100_bases
ACAACCCGCACCTCGCAAACCGGCGTAACCCGCAGACTCGCCCCGGCCGCTCGATCCGCGACACCGTCACCGGGGGTCGC
GCTGTGGCGCCCGACGCGCT

Product: micrococcal nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MISLLPSPAPTEAIAPMLRCVLAALLLTALPASAQTTDCRVIGIADGNVFSCRTAEGDRLRVRMAEIDAPELKQPYGAQA
RQALSGYVFGKNVQLTVQGRDDQGRTLARVRAGDTDVNAEMVRTGTAWAYRAQLKDRALLDLEAVAREFKRGLWALHKTE
QQPPWEWRKEMRSARR

Sequences:

>Translated_176_residues
MISLLPSPAPTEAIAPMLRCVLAALLLTALPASAQTTDCRVIGIADGNVFSCRTAEGDRLRVRMAEIDAPELKQPYGAQA
RQALSGYVFGKNVQLTVQGRDDQGRTLARVRAGDTDVNAEMVRTGTAWAYRAQLKDRALLDLEAVAREFKRGLWALHKTE
QQPPWEWRKEMRSARR
>Mature_176_residues
MISLLPSPAPTEAIAPMLRCVLAALLLTALPASAQTTDCRVIGIADGNVFSCRTAEGDRLRVRMAEIDAPELKQPYGAQA
RQALSGYVFGKNVQLTVQGRDDQGRTLARVRAGDTDVNAEMVRTGTAWAYRAQLKDRALLDLEAVAREFKRGLWALHKTE
QQPPWEWRKEMRSARR

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thermonuclease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016071
- InterPro:   IPR006021
- InterPro:   IPR002071 [H]

Pfam domain/function: PF00565 SNase [H]

EC number: NA

Molecular weight: Translated: 19546; Mature: 19546

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLLPSPAPTEAIAPMLRCVLAALLLTALPASAQTTDCRVIGIADGNVFSCRTAEGDRL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCCEE
RVRMAEIDAPELKQPYGAQARQALSGYVFGKNVQLTVQGRDDQGRTLARVRAGDTDVNAE
EEEEECCCCCCCCCCCCHHHHHHHHCEEECCCEEEEEECCCCCCCEEEEEECCCCCCCHH
MVRTGTAWAYRAQLKDRALLDLEAVAREFKRGLWALHKTEQQPPWEWRKEMRSARR
HEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MISLLPSPAPTEAIAPMLRCVLAALLLTALPASAQTTDCRVIGIADGNVFSCRTAEGDRL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCCEE
RVRMAEIDAPELKQPYGAQARQALSGYVFGKNVQLTVQGRDDQGRTLARVRAGDTDVNAE
EEEEECCCCCCCCCCCCHHHHHHHHCEEECCCEEEEEECCCCCCCEEEEEECCCCCCCHH
MVRTGTAWAYRAQLKDRALLDLEAVAREFKRGLWALHKTEQQPPWEWRKEMRSARR
HEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]