| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146284412
Identifier: 146284412
GI number: 146284412
Start: 4454477
End: 4455220
Strand: Direct
Name: 146284412
Synonym: PST_4101
Alternate gene names: NA
Gene position: 4454477-4455220 (Clockwise)
Preceding gene: 146284411
Following gene: 146284413
Centisome position: 97.53
GC content: 65.86
Gene sequence:
>744_bases ATGGCGCTAGCCCTGGCAGTCGGCGACAGCCATGCCGAACAGCTGCGCTTCGTCACCGAAGACTTCCCGCCATTCACCTA CGCAGCCACGCATAAGACTGACAACGACAGGGCCGCCGGGCCCTTCGTCGAGATCGTCGAAGCCGTCTGCGCGCGGATGG GTATCGACTGCCCGATCCAGCTGCTGCCCTGGCGCCGCGCGCTGGCCCTGGCCGAGGCGGGTGAGGTGGACGGCATTTTC ACCGTGATCCGCTCGCCGGAACGCGAACGCGCCTTCCACCTCACCCGCATGTTGGCGACCTCGCGCTACGGCGTGTATGC ACGCGGCGCCAGCGGCTTCGTGTTTCATCGCGCACAAGACCTGGCTGGCCGCACCGTTGCGGTGTACGGCCCATCCGGTA CCTCGTTCGTATTGAGCGAACATCTGGCCCAGGTGGACGACGTGCAGATGATTCTGGAGTCGGACAACCGCCGCCTGATG CGCATGCTGCAGGCCGGACGCTTTGGCGGACAGGGCGTGGCGGTGGTCAACCAGGATGTGGCCTGGCACCTGATCGAGCA GGAGCGGCTGGTGGATATCCACGAAGCGGGTGAGCTGCAAAGCGTTTCCTACGCCATCGGGCTTTCCCGCGTGGCAGTGA GCGAGACACGCTTCCAGCGTTTCGACGATGCCCTGGAGGCACTGATCGCCGATGGCAGCATCGCGCGCATCCTGCGCCGA CACGGGCTGCAGCCTGCCCTCTAG
Upstream 100 bases:
>100_bases GCGCCCGACGCGCTAGCCTGACGCTCACGGACGGAGCGCACCTGCTGCTGTCGCCGCGCCGGGAACCTCGACCATGGCCA TACGCCGAATTGCACTCTGA
Downstream 100 bases:
>100_bases CGGCCACGGCCGCCCCGATCGACCTTCCATCGCATCTTTTCGCTGAATCATTCGGCGCTTCGGGCCGTCTACCCAGAAGG CAGCGTTCGGGCAATCCGGA
Product: amino acid ABC transporter periplasmic protein
Products: NA
Alternate protein names: Amino Acid ABC Transporter
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MALALAVGDSHAEQLRFVTEDFPPFTYAATHKTDNDRAAGPFVEIVEAVCARMGIDCPIQLLPWRRALALAEAGEVDGIF TVIRSPERERAFHLTRMLATSRYGVYARGASGFVFHRAQDLAGRTVAVYGPSGTSFVLSEHLAQVDDVQMILESDNRRLM RMLQAGRFGGQGVAVVNQDVAWHLIEQERLVDIHEAGELQSVSYAIGLSRVAVSETRFQRFDDALEALIADGSIARILRR HGLQPAL
Sequences:
>Translated_247_residues MALALAVGDSHAEQLRFVTEDFPPFTYAATHKTDNDRAAGPFVEIVEAVCARMGIDCPIQLLPWRRALALAEAGEVDGIF TVIRSPERERAFHLTRMLATSRYGVYARGASGFVFHRAQDLAGRTVAVYGPSGTSFVLSEHLAQVDDVQMILESDNRRLM RMLQAGRFGGQGVAVVNQDVAWHLIEQERLVDIHEAGELQSVSYAIGLSRVAVSETRFQRFDDALEALIADGSIARILRR HGLQPAL >Mature_246_residues ALALAVGDSHAEQLRFVTEDFPPFTYAATHKTDNDRAAGPFVEIVEAVCARMGIDCPIQLLPWRRALALAEAGEVDGIFT VIRSPERERAFHLTRMLATSRYGVYARGASGFVFHRAQDLAGRTVAVYGPSGTSFVLSEHLAQVDDVQMILESDNRRLMR MLQAGRFGGQGVAVVNQDVAWHLIEQERLVDIHEAGELQSVSYAIGLSRVAVSETRFQRFDDALEALIADGSIARILRRH GLQPAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27216; Mature: 27085
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALALAVGDSHAEQLRFVTEDFPPFTYAATHKTDNDRAAGPFVEIVEAVCARMGIDCPIQ CEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEE LLPWRRALALAEAGEVDGIFTVIRSPERERAFHLTRMLATSRYGVYARGASGFVFHRAQD ECCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCEEEEEHHH LAGRTVAVYGPSGTSFVLSEHLAQVDDVQMILESDNRRLMRMLQAGRFGGQGVAVVNQDV CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCH AWHLIEQERLVDIHEAGELQSVSYAIGLSRVAVSETRFQRFDDALEALIADGSIARILRR HHEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH HGLQPAL CCCCCCC >Mature Secondary Structure ALALAVGDSHAEQLRFVTEDFPPFTYAATHKTDNDRAAGPFVEIVEAVCARMGIDCPIQ EEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEE LLPWRRALALAEAGEVDGIFTVIRSPERERAFHLTRMLATSRYGVYARGASGFVFHRAQD ECCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCEEEEEHHH LAGRTVAVYGPSGTSFVLSEHLAQVDDVQMILESDNRRLMRMLQAGRFGGQGVAVVNQDV CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCH AWHLIEQERLVDIHEAGELQSVSYAIGLSRVAVSETRFQRFDDALEALIADGSIARILRR HHEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH HGLQPAL CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA