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The map label for this gene is 146284274

Identifier: 146284274

GI number: 146284274

Start: 4298584

End: 4299825

Strand: Direct

Name: 146284274

Synonym: PST_3962

Alternate gene names: NA

Gene position: 4298584-4299825 (Clockwise)

Preceding gene: 146284272

Following gene: 146284275

Centisome position: 94.11

GC content: 64.09

Gene sequence:

>1242_bases
ATGCAAACAGTACTCATGGTTCCCGTCATGCAACTGATCGACAAACTCAGCGTGCTCGCCGACGCTGCCAAGTACGACGT
TTCGTGTGCCAGCAGTGGCGCGCCGAAGCGCTCGTCCAAAGGCAAGAGCGGGCTCGGCGCCACCGATGGCATGGGCATCT
GCCACAGCTTTACCCCGGATGGTCGCTGCGTGGCGCTGTTGAAGATCCTGCTCACCAATTTCTGCCTGTACGACTGCCAG
TACTGCGTCAATCGGCGCTCCAGCGACGTACCCCGCGCGCGCTTCACGCCGGAGGAGGTAGTCGAGCTGACGCTGGACTT
CTATCGCCGCAATTGCATCAGCGGGCTCTTCCTCAGTTCCGGCATCATCCGCTCGGCCGACTACACCATGGAGCAGCTGG
TGCGGGTCGCCAGGCTGCTGCGCGAAGAGCATGAATTTCGCGGCTACATCCACCTCAAGACGATTCCCGATGCCGACCCG
CTGCTGATCGCCGAAGCCGGGCGCCATGCCGACCGGCTCAGCGTGAACATCGAGCTGCCGACCGAGAGCAGCCTGATTCG
CCTGGCCCCGGAAAAACAGGTGCTGACCATCAAGCAGGCCATGCACACCATCCACCAGGGCGAGGCCGAGGCCAGCGCGG
AGAAGCGTGCACCGCGTTTCGCTCCTGCCGGGCAGAGCACGCAGATGATCGTTGGCGCCGATGACACCGATGACCGCACC
ATCCTGCATACCGCGCAGTCCCTTTACGGCGACTACCGCCTGCGGCGGGTCTACTACTCGGCGTTCAGCCCCATTCCGCA
CAGCCCGAAAAGCGTGCCGTTCGCCGCACCGCCACTGTTGCGCGAGCATCGGCTGTACCAGGCGGATTTTCTCATGCGCG
GCTATGGTTTCTCGGCCGGCGAACTGCTCAGCGGCCCCGGTAACCTTGCCCTGGACGTAGACCCGAAACTGGCCTGGGCG
CTGGCCAACCGGGAGCATTTCCCGATTGACCTCAACCGTGCCGAACCGACCATGATTGCCCGCGTTCCCGGTATCGGCGT
GCTCAGCGCCAAGCGACTGGTGGACCTGCGACGGCACAAGCGCATCCGCTTCGAGGACCTGACCCGCCTGCGCTGCTCGC
TGGAAAAGGCCAAGCCGTTCATCGTCACCCATGACTACCGCCCCAGCCTCGCCGGGCAGGAATCGATGGTGTTGCGGCAG
CACCTGCGCGACGGTTCGCCTACGCAGATGGCGCTCTGGTGA

Upstream 100 bases:

>100_bases
CGATAGGCGGTTGAGTGAATGACGACCAGCTTATCCGATAATTCGCTCAGCCGGCGCCGCCAGACGGCCACCGAAGCCGT
CGCCTGCCGTGATACTGTAT

Downstream 100 bases:

>100_bases
TGTGCACGGTGCGCTTCGACGGAAGCTACCAGGGCTGGCGAGACGCGGCGCGGGTGCTGCTGCAGGAGCAGATCGCACCG
CATGAGGTGAACTGGGCAAG

Product: elongator protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Radical SAM; Radical SAM Superfamily Protein; Biotin Synthase Related Domain-Containing Protein; Biotin Synthase Related Domain Containing Protein; Elongator Protein; Radical SAM Methylase Protein; Helix-Hairpin-Helix Motif; Radical SAM Protein

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MQTVLMVPVMQLIDKLSVLADAAKYDVSCASSGAPKRSSKGKSGLGATDGMGICHSFTPDGRCVALLKILLTNFCLYDCQ
YCVNRRSSDVPRARFTPEEVVELTLDFYRRNCISGLFLSSGIIRSADYTMEQLVRVARLLREEHEFRGYIHLKTIPDADP
LLIAEAGRHADRLSVNIELPTESSLIRLAPEKQVLTIKQAMHTIHQGEAEASAEKRAPRFAPAGQSTQMIVGADDTDDRT
ILHTAQSLYGDYRLRRVYYSAFSPIPHSPKSVPFAAPPLLREHRLYQADFLMRGYGFSAGELLSGPGNLALDVDPKLAWA
LANREHFPIDLNRAEPTMIARVPGIGVLSAKRLVDLRRHKRIRFEDLTRLRCSLEKAKPFIVTHDYRPSLAGQESMVLRQ
HLRDGSPTQMALW

Sequences:

>Translated_413_residues
MQTVLMVPVMQLIDKLSVLADAAKYDVSCASSGAPKRSSKGKSGLGATDGMGICHSFTPDGRCVALLKILLTNFCLYDCQ
YCVNRRSSDVPRARFTPEEVVELTLDFYRRNCISGLFLSSGIIRSADYTMEQLVRVARLLREEHEFRGYIHLKTIPDADP
LLIAEAGRHADRLSVNIELPTESSLIRLAPEKQVLTIKQAMHTIHQGEAEASAEKRAPRFAPAGQSTQMIVGADDTDDRT
ILHTAQSLYGDYRLRRVYYSAFSPIPHSPKSVPFAAPPLLREHRLYQADFLMRGYGFSAGELLSGPGNLALDVDPKLAWA
LANREHFPIDLNRAEPTMIARVPGIGVLSAKRLVDLRRHKRIRFEDLTRLRCSLEKAKPFIVTHDYRPSLAGQESMVLRQ
HLRDGSPTQMALW
>Mature_413_residues
MQTVLMVPVMQLIDKLSVLADAAKYDVSCASSGAPKRSSKGKSGLGATDGMGICHSFTPDGRCVALLKILLTNFCLYDCQ
YCVNRRSSDVPRARFTPEEVVELTLDFYRRNCISGLFLSSGIIRSADYTMEQLVRVARLLREEHEFRGYIHLKTIPDADP
LLIAEAGRHADRLSVNIELPTESSLIRLAPEKQVLTIKQAMHTIHQGEAEASAEKRAPRFAPAGQSTQMIVGADDTDDRT
ILHTAQSLYGDYRLRRVYYSAFSPIPHSPKSVPFAAPPLLREHRLYQADFLMRGYGFSAGELLSGPGNLALDVDPKLAWA
LANREHFPIDLNRAEPTMIARVPGIGVLSAKRLVDLRRHKRIRFEDLTRLRCSLEKAKPFIVTHDYRPSLAGQESMVLRQ
HLRDGSPTQMALW

Specific function: Unknown

COG id: COG4277

COG function: function code R; Predicted DNA-binding protein with the Helix-hairpin-helix motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46182; Mature: 46182

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTVLMVPVMQLIDKLSVLADAAKYDVSCASSGAPKRSSKGKSGLGATDGMGICHSFTPD
CCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
GRCVALLKILLTNFCLYDCQYCVNRRSSDVPRARFTPEEVVELTLDFYRRNCISGLFLSS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GIIRSADYTMEQLVRVARLLREEHEFRGYIHLKTIPDADPLLIAEAGRHADRLSVNIELP
CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEECCCCCCCEEEEEEECC
TESSLIRLAPEKQVLTIKQAMHTIHQGEAEASAEKRAPRFAPAGQSTQMIVGADDTDDRT
CCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHH
ILHTAQSLYGDYRLRRVYYSAFSPIPHSPKSVPFAAPPLLREHRLYQADFLMRGYGFSAG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
ELLSGPGNLALDVDPKLAWALANREHFPIDLNRAEPTMIARVPGIGVLSAKRLVDLRRHK
HHCCCCCCEEEECCCCEEEEECCCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHHHHC
RIRFEDLTRLRCSLEKAKPFIVTHDYRPSLAGQESMVLRQHLRDGSPTQMALW
CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEECC
>Mature Secondary Structure
MQTVLMVPVMQLIDKLSVLADAAKYDVSCASSGAPKRSSKGKSGLGATDGMGICHSFTPD
CCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
GRCVALLKILLTNFCLYDCQYCVNRRSSDVPRARFTPEEVVELTLDFYRRNCISGLFLSS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GIIRSADYTMEQLVRVARLLREEHEFRGYIHLKTIPDADPLLIAEAGRHADRLSVNIELP
CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEECCCCCCCEEEEEEECC
TESSLIRLAPEKQVLTIKQAMHTIHQGEAEASAEKRAPRFAPAGQSTQMIVGADDTDDRT
CCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHH
ILHTAQSLYGDYRLRRVYYSAFSPIPHSPKSVPFAAPPLLREHRLYQADFLMRGYGFSAG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
ELLSGPGNLALDVDPKLAWALANREHFPIDLNRAEPTMIARVPGIGVLSAKRLVDLRRHK
HHCCCCCCEEEECCCCEEEEECCCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHHHHC
RIRFEDLTRLRCSLEKAKPFIVTHDYRPSLAGQESMVLRQHLRDGSPTQMALW
CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA