Definition Pseudomonas stutzeri A1501, complete genome.
Accession NC_009434
Length 4,567,418

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The map label for this gene is yqeZ [H]

Identifier: 146284202

GI number: 146284202

Start: 4217694

End: 4219070

Strand: Direct

Name: yqeZ [H]

Synonym: PST_3890

Alternate gene names: 146284202

Gene position: 4217694-4219070 (Clockwise)

Preceding gene: 146284199

Following gene: 146284203

Centisome position: 92.34

GC content: 69.28

Gene sequence:

>1377_bases
ATGCCTCGCCATCCCGCCCGCTGGCTGCTGGCCCTGCTGTTCGCGCTCGCGGTCCAGAGCGCGAGTGCCGCCGATCCGGT
GACGCTGCTGCGGGTCGATGGCGCCATCGGTCCGGCCAGCGCCGATTACATCCTGCGCGGCCTGCAACACGCCCGCGACG
AGGGCGCACAGCTGGTGGTGCTGGAACTGGACACCCCCGGCGGGCTGGACACCTCCATGCGCGCGATCATCAAGGCGATC
CTCGCCAGCCCGATTCCGGTCGCCACCTACGTCACCCCCAGCGGCGCCCGCGCCGCCAGCGCCGGCACCTACATGCTCTA
TGCCAGCCATGTCGCCGCGATGGCGCCGGGCACCAATCTCGGCGCGGCGACGCCGGTGCAGATCGGCGGCATGCCCGGTG
CACCGCCGGAGCAGCCGAAGGGCGAGCGTGAAGACGACGCCAAGGCCTCCGGCGACGCCCTCGCCCGCAAGCAGGTGAAC
GATGCGGCGGCCTATATCCGCGGGCTGGCCCAGCTGCGCGAACGCAACGCCGAGTGGGCCGAGCAGGCGGTGCGCGAGGC
GGTCAGCCTGTCGGCCAGCGAAGCCCTGAAACTCAAGGTGATCGATTACCTGGCGCGCGACGTGGCCGACCTACTGCGTC
AGCTCGACGGCAAGACGCTGGCCACCATCGAGGGCGAGGTCAGGCTGCAGACGGCCGATGCGCGCCTGATCGAACACGCG
CCGGACTGGAGGGTGCGCCTGCTGGCGGTGATCACCAACCCCAGCGTGGCGCTGATTCTGATGATGATCGGCATCTACGG
GCTGATCCTCGAATTCTCCAATCCCGGCATGGGCGCCGGCGGCGTGCTGGGCGGCATTTGCCTGATCCTGGCGCTGTATG
CGCTGCAGCTGCTGCCGGTGAACTACGCCGGGGTGGCGCTGATCCTGCTCGGCATCGCCTTCATGGTGGCCGAGGCCTTC
CTGCCCAGTTTCGGTGTGCTCGGCATCGGCGGGGTCGCCGCGTTCGTCGCCGGCGCGGTGATTCTGATCGACACCGAGGT
ACCCGGCTTCGGCATTCCACTGTCGCTGATCGTGCCACTGGGCTTCGCCAGCGCGCTGCTGGTGTTCGCCATCGTCGCCA
TGGCACTGAAGGCGCGCCGCCAGCGGCTGGTCGGCGGTGATGCCGAGCTGATCGGCAGCCTGGCGCCGGTCACCGGCATC
TCCGCGCAGGACCCGCACAGCGGCTGGGTGCATCTGCAGGGCGAGAACTGGCAGGTACGCAGCGCCACCCCGTTGCAGGT
CGGCCAGCAGGTACGGGTGGTCGCCCGGGAGGGTCTGCAATTGAACGTCGCGGCACAGCCATCAAGCAATCGAGAGGAGC
TGAACCATGGGTTATGA

Upstream 100 bases:

>100_bases
GGATACGCGGCGTCCTGCCTCGCCGCGCCACGACGGCGGTGGTCTAAGCTGCCAGCAAGGGCACGACACTGTGCCGTGCC
GCTGCCAGAGGACATCCGCC

Downstream 100 bases:

>100_bases
AATGAGTTTTCTGGTGCTGCTGGTGCTGGTCGTGGGGCTGCTCGCCTCGGCGTTCCGCATCCTGCGTGAGTACGAGCGCG
GCGTGGTGTTCATGCTCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MPRHPARWLLALLFALAVQSASAADPVTLLRVDGAIGPASADYILRGLQHARDEGAQLVVLELDTPGGLDTSMRAIIKAI
LASPIPVATYVTPSGARAASAGTYMLYASHVAAMAPGTNLGAATPVQIGGMPGAPPEQPKGEREDDAKASGDALARKQVN
DAAAYIRGLAQLRERNAEWAEQAVREAVSLSASEALKLKVIDYLARDVADLLRQLDGKTLATIEGEVRLQTADARLIEHA
PDWRVRLLAVITNPSVALILMMIGIYGLILEFSNPGMGAGGVLGGICLILALYALQLLPVNYAGVALILLGIAFMVAEAF
LPSFGVLGIGGVAAFVAGAVILIDTEVPGFGIPLSLIVPLGFASALLVFAIVAMALKARRQRLVGGDAELIGSLAPVTGI
SAQDPHSGWVHLQGENWQVRSATPLQVGQQVRVVAREGLQLNVAAQPSSNREELNHGL

Sequences:

>Translated_458_residues
MPRHPARWLLALLFALAVQSASAADPVTLLRVDGAIGPASADYILRGLQHARDEGAQLVVLELDTPGGLDTSMRAIIKAI
LASPIPVATYVTPSGARAASAGTYMLYASHVAAMAPGTNLGAATPVQIGGMPGAPPEQPKGEREDDAKASGDALARKQVN
DAAAYIRGLAQLRERNAEWAEQAVREAVSLSASEALKLKVIDYLARDVADLLRQLDGKTLATIEGEVRLQTADARLIEHA
PDWRVRLLAVITNPSVALILMMIGIYGLILEFSNPGMGAGGVLGGICLILALYALQLLPVNYAGVALILLGIAFMVAEAF
LPSFGVLGIGGVAAFVAGAVILIDTEVPGFGIPLSLIVPLGFASALLVFAIVAMALKARRQRLVGGDAELIGSLAPVTGI
SAQDPHSGWVHLQGENWQVRSATPLQVGQQVRVVAREGLQLNVAAQPSSNREELNHGL
>Mature_457_residues
PRHPARWLLALLFALAVQSASAADPVTLLRVDGAIGPASADYILRGLQHARDEGAQLVVLELDTPGGLDTSMRAIIKAIL
ASPIPVATYVTPSGARAASAGTYMLYASHVAAMAPGTNLGAATPVQIGGMPGAPPEQPKGEREDDAKASGDALARKQVND
AAAYIRGLAQLRERNAEWAEQAVREAVSLSASEALKLKVIDYLARDVADLLRQLDGKTLATIEGEVRLQTADARLIEHAP
DWRVRLLAVITNPSVALILMMIGIYGLILEFSNPGMGAGGVLGGICLILALYALQLLPVNYAGVALILLGIAFMVAEAFL
PSFGVLGIGGVAAFVAGAVILIDTEVPGFGIPLSLIVPLGFASALLVFAIVAMALKARRQRLVGGDAELIGSLAPVTGIS
AQDPHSGWVHLQGENWQVRSATPLQVGQQVRVVAREGLQLNVAAQPSSNREELNHGL

Specific function: Unknown

COG id: COG1030

COG function: function code O; Membrane-bound serine protease (ClpP class)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002810
- InterPro:   IPR002825 [H]

Pfam domain/function: PF01972 DUF114; PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 47841; Mature: 47710

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRHPARWLLALLFALAVQSASAADPVTLLRVDGAIGPASADYILRGLQHARDEGAQLVV
CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEE
LELDTPGGLDTSMRAIIKAILASPIPVATYVTPSGARAASAGTYMLYASHVAAMAPGTNL
EEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCC
GAATPVQIGGMPGAPPEQPKGEREDDAKASGDALARKQVNDAAAYIRGLAQLRERNAEWA
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
EQAVREAVSLSASEALKLKVIDYLARDVADLLRQLDGKTLATIEGEVRLQTADARLIEHA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEHHHHHHHCC
PDWRVRLLAVITNPSVALILMMIGIYGLILEFSNPGMGAGGVLGGICLILALYALQLLPV
CCCEEEEEEEECCCHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
NYAGVALILLGIAFMVAEAFLPSFGVLGIGGVAAFVAGAVILIDTEVPGFGIPLSLIVPL
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHH
GFASALLVFAIVAMALKARRQRLVGGDAELIGSLAPVTGISAQDPHSGWVHLQGENWQVR
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEC
SATPLQVGQQVRVVAREGLQLNVAAQPSSNREELNHGL
CCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCC
>Mature Secondary Structure 
PRHPARWLLALLFALAVQSASAADPVTLLRVDGAIGPASADYILRGLQHARDEGAQLVV
CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEE
LELDTPGGLDTSMRAIIKAILASPIPVATYVTPSGARAASAGTYMLYASHVAAMAPGTNL
EEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCC
GAATPVQIGGMPGAPPEQPKGEREDDAKASGDALARKQVNDAAAYIRGLAQLRERNAEWA
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
EQAVREAVSLSASEALKLKVIDYLARDVADLLRQLDGKTLATIEGEVRLQTADARLIEHA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEHHHHHHHCC
PDWRVRLLAVITNPSVALILMMIGIYGLILEFSNPGMGAGGVLGGICLILALYALQLLPV
CCCEEEEEEEECCCHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
NYAGVALILLGIAFMVAEAFLPSFGVLGIGGVAAFVAGAVILIDTEVPGFGIPLSLIVPL
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHH
GFASALLVFAIVAMALKARRQRLVGGDAELIGSLAPVTGISAQDPHSGWVHLQGENWQVR
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEC
SATPLQVGQQVRVVAREGLQLNVAAQPSSNREELNHGL
CCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]