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The map label for this gene is 146284060

Identifier: 146284060

GI number: 146284060

Start: 4053608

End: 4054477

Strand: Direct

Name: 146284060

Synonym: PST_3748

Alternate gene names: NA

Gene position: 4053608-4054477 (Clockwise)

Preceding gene: 146284059

Following gene: 146284061

Centisome position: 88.75

GC content: 59.89

Gene sequence:

>870_bases
ATGAGCGTCATCGCGAACCGTTATGAATTCGTCTACCTGTTCGATGTCACCAACGGCAACCCCAACGGCGACCCGGACGC
TGGCAACCTGCCCCGCCTCGACCCGGAAACCAACCAAGGCCTGGTTACCGACGTCTGCCTGAAACGCAAGCTCCGCAATT
ACGTCGCGCTGGAGCAGGAGGGCGCGCCGGGTTACGCCATCTATATGCAGGAGAAATCGGTGCTGAATAATCAGCACAAG
CAGGCCTACGAAGCACTGGGCATCGAGTCCGAGGCCAAGAAGCTGCCCAAGGACGAAGCCAAGGCGCGCGAGCTGACCGG
CTGGATGTGCAAGAACTTCTTCGACGTACGCGCCTTCGGCGCGGTGATGACTACCGAAGTCAATGCCGGTCAGGTACGCG
GGCCGATCCAGCTGGCTTTCGCCACCTCCATCGACCCGGTGCTGCCGATGGAAATTTCCATCACCCGGATGGCGGTGACC
AATGAAAAGGATTTGGAAAAAGAACGCACCATGGGCCGCAAACACATCGTTCCTTACGGTTTGTACCGTGCTCACGGCTT
CGTCTCCGCCAAGCTGGCCGAGCGCACCGGCTTTTCCGAAGAGGATCTTGGCCTGCTGTGGCGCGCGCTGATCAACATGT
TCGAGCACGACCGCTCTGCCGCGCGCGGCGAAATGGCCGCCCGCAAGCTGATCGTGTTCAAGCATGAGCACCCCATGGGC
AATGCACCGGCACACGTGCTGTTCGATAGCGTCCAGATCGAGCGTGTGGAAGGCGAAGCGCATACCCCTGCGCGAAGCTT
CAAGGACTATCAGATCAGCGTAAACGCCGAAGCCCTACCGCAGGGTGTCAGCGTCATGGAACTGTTGTAG

Upstream 100 bases:

>100_bases
TGGAGGATCAGGGCCGCTTCGCCATCGGTTACTACCACCAGTCCCAAGCCCGTTTTACACGCACCCCCGACCCGGAAAAT
CTTGAGCAAGGAGCACCTGC

Downstream 100 bases:

>100_bases
GGCGCTGGGGAGCGGGAACATGGACGACGACAACCTCATCCCGATTTCCGCCCTGCAGCACTACCTGTACTGCCCACGCC
AATGTGCGCTCATCCATGTC

Product: CRISPR-associated Csh2 family protein

Products: NA

Alternate protein names: CRISPR-Associated Csh2 Family Protein; CRISPR-Associated Csd2 Family Protein; Csd2 Family CRISPR-Associated Protein; CRISPR-Associated Protein Csh2 Family; CRISPR-Associated Protein; Crispr-Associated Protein; Crispr-Protein; Cytoplasmic Protein; CRISPR-Associated Protein TM; CRISPR-Associated RAMP Csd3 Family Protein; CRISPR-Associated RAMP Protein Cmr1 Family; Cas2 Family CRISPR-Associated Protein; Csh Crispr-Associated Protein Csh2 Family; CRISPR-Associated Protein Csd3 Family

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSVIANRYEFVYLFDVTNGNPNGDPDAGNLPRLDPETNQGLVTDVCLKRKLRNYVALEQEGAPGYAIYMQEKSVLNNQHK
QAYEALGIESEAKKLPKDEAKARELTGWMCKNFFDVRAFGAVMTTEVNAGQVRGPIQLAFATSIDPVLPMEISITRMAVT
NEKDLEKERTMGRKHIVPYGLYRAHGFVSAKLAERTGFSEEDLGLLWRALINMFEHDRSAARGEMAARKLIVFKHEHPMG
NAPAHVLFDSVQIERVEGEAHTPARSFKDYQISVNAEALPQGVSVMELL

Sequences:

>Translated_289_residues
MSVIANRYEFVYLFDVTNGNPNGDPDAGNLPRLDPETNQGLVTDVCLKRKLRNYVALEQEGAPGYAIYMQEKSVLNNQHK
QAYEALGIESEAKKLPKDEAKARELTGWMCKNFFDVRAFGAVMTTEVNAGQVRGPIQLAFATSIDPVLPMEISITRMAVT
NEKDLEKERTMGRKHIVPYGLYRAHGFVSAKLAERTGFSEEDLGLLWRALINMFEHDRSAARGEMAARKLIVFKHEHPMG
NAPAHVLFDSVQIERVEGEAHTPARSFKDYQISVNAEALPQGVSVMELL
>Mature_288_residues
SVIANRYEFVYLFDVTNGNPNGDPDAGNLPRLDPETNQGLVTDVCLKRKLRNYVALEQEGAPGYAIYMQEKSVLNNQHKQ
AYEALGIESEAKKLPKDEAKARELTGWMCKNFFDVRAFGAVMTTEVNAGQVRGPIQLAFATSIDPVLPMEISITRMAVTN
EKDLEKERTMGRKHIVPYGLYRAHGFVSAKLAERTGFSEEDLGLLWRALINMFEHDRSAARGEMAARKLIVFKHEHPMGN
APAHVLFDSVQIERVEGEAHTPARSFKDYQISVNAEALPQGVSVMELL

Specific function: Unknown

COG id: COG3649

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32339; Mature: 32208

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVIANRYEFVYLFDVTNGNPNGDPDAGNLPRLDPETNQGLVTDVCLKRKLRNYVALEQE
CCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECC
GAPGYAIYMQEKSVLNNQHKQAYEALGIESEAKKLPKDEAKARELTGWMCKNFFDVRAFG
CCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AVMTTEVNAGQVRGPIQLAFATSIDPVLPMEISITRMAVTNEKDLEKERTMGRKHIVPYG
HEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCCCCH
LYRAHGFVSAKLAERTGFSEEDLGLLWRALINMFEHDRSAARGEMAARKLIVFKHEHPMG
HHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCC
NAPAHVLFDSVQIERVEGEAHTPARSFKDYQISVNAEALPQGVSVMELL
CCCHHEEEECEEEEEECCCCCCCCCCCCCEEEEECHHHCCCCCHHHHCC
>Mature Secondary Structure 
SVIANRYEFVYLFDVTNGNPNGDPDAGNLPRLDPETNQGLVTDVCLKRKLRNYVALEQE
CCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECC
GAPGYAIYMQEKSVLNNQHKQAYEALGIESEAKKLPKDEAKARELTGWMCKNFFDVRAFG
CCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AVMTTEVNAGQVRGPIQLAFATSIDPVLPMEISITRMAVTNEKDLEKERTMGRKHIVPYG
HEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCCCCH
LYRAHGFVSAKLAERTGFSEEDLGLLWRALINMFEHDRSAARGEMAARKLIVFKHEHPMG
HHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCC
NAPAHVLFDSVQIERVEGEAHTPARSFKDYQISVNAEALPQGVSVMELL
CCCHHEEEECEEEEEECCCCCCCCCCCCCEEEEECHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA