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The map label for this gene is 146284059

Identifier: 146284059

GI number: 146284059

Start: 4051824

End: 4053611

Strand: Direct

Name: 146284059

Synonym: PST_3747

Alternate gene names: NA

Gene position: 4051824-4053611 (Clockwise)

Preceding gene: 146284058

Following gene: 146284060

Centisome position: 88.71

GC content: 59.9

Gene sequence:

>1788_bases
ATGATCCTTTCGGCATTGAACGACTACTATCAGCGGTTGCTGGAGCAAGGCGCGGACGGCGTTTCGCCCTTCGGCTACAG
CCAGGAAAAGATCAGTTATGAAATTTTGCTGAGCCCGGATGGCGAGGTGGTTGATGTAAATGACATTCGCCAGGTGGCCG
GCAATAAGCCCATCCCCAGGTCGCTGAGCGTGCCGCAGCCCGAGAAACGCACCTCAGGCACCAAATCCAATTTTCTATGG
GACAAGACCAGCTACGTGCTGGGTGTCAGCAGCAAAGACGGCGGACGCACGGCATTGGAGCATGCAGCCTTCAAGGAACT
GCATTTGCAGGCATTGGCTGACGAGGACGATGCGGGGTTGCAGTCCCTGACGAAATTCCTGAAGCAATGGGAGCCCCAAA
AGTTCAGGCCGCCTACCTTCAGCGAAGAAATGCTCGACACCAATGTCGTCTTTCGCCTCGATGGCCAACAGCAGTATCTG
CATGAGTCCCCGGCCGCACAGACCGTCCGCGCCAAACTGCTGGCCAGTGGCGACAGCCGCAATGGCCTTTGCCTGGTAAC
AGGCCAGCAACAGCCATTGGCTCGGCTACATCCGGCGGTCAAAGGCGTGAATGGCGCGCAAAGCTCTGGCGCGTCCATCG
TGTCCTTCAACCTGGACGCTTTTACCTCCTACGGTAAAAGCCAAGGCGAAAACGCACCCATTTCCGAACAGGTCGCTTTT
GCCTATACGACTGTTCTCAACCATCTGCTGCGCCGCGACGAGCATAACCGCCAGCGCCTGCAAATCGGCGATGCCAGCGT
GGTCTTCTGGGCTCAAAGCGCCGACACCCAGCAGTCTATGCAGGCAGAAACGACCTTCTGGAGCATGCTCGAACCTCCCA
GCGATGATGGGCAGGAAGCCGAAAAGCTTCGCAACGTGCTGTCGGCAGTCGCTCAAGGCCGCCCCTTGCGTGAACTCGAT
CCGCAGTTGGAGGACCGGACCCGCCTGTTCGTACTGGGCCTGGCACCCAATGCGTCACGCCTGTCCATTCGTTTTTGGGA
AAGTGGCGACCTTGAATCCTTTGCCCGCCGCCTGGGCGAACACTTCCTGGACTTGCATATCGAACCGCCTCCCTGGAAGA
CGGCTCCGGCCATCTGGCGGCTGCTCTATGCCACCGCACCCAGCCGCGACGGCAAGGCCAAGGCCGAAGATGTGCCCGCG
CATCTGGCCGGAGAAATGGCCCGCGCCATTCTTACCGGCAGACGTTATCCACAAAGCCTGTTGGCCACATTAATCATGCG
CATGCGTGCCGATGGCGACATCTCCGGCGTGCGCGTCGCGCTGTGCAAAGCCGTTATCGCCCGTGAGGCACGGTTGGGCG
GAAACAAAACCAACCCCGAGGAGTTACCCATGAGTCTCGACAAGGAAGCCGCCAACCCGGGTTATCGCCTGGGCCGATTA
TTCGCCGTGCTGGAGGGCGCTCAGCGCCTGGCATTGGGCGACAGGATCAACGCCACTATCCGCGATCGCTACTACGGTGC
GGCATCTGCCACGCCCGCCACGATATTTCCGATGCTACTGCGCAACGCCCAGAACCACCTCGCCAAGTTGCGCAAGGACA
AGCCCGGCCTGGCCGTGAACCTCGAACGGGATATAGCCGAAATCATCGGCGGCCTACAAAGCCAGTTTCCGCGCAGCCTG
CGCCTGGAGGATCAGGGCCGCTTCGCCATCGGTTACTACCACCAGTCCCAAGCCCGTTTTACACGCACCCCCGACCCGGA
AAATCTTGAGCAAGGAGCACCTGCATGA

Upstream 100 bases:

>100_bases
ACATCGATTTTGCCAATGACATGACGCCTCACTTCTTTCGCGCCCGGATGAACTCCGGCGTGATCGATGTTCCTCCCTTC
CTGGGCGAGGGGAGCAAGGC

Downstream 100 bases:

>100_bases
GCGTCATCGCGAACCGTTATGAATTCGTCTACCTGTTCGATGTCACCAACGGCAACCCCAACGGCGACCCGGACGCTGGC
AACCTGCCCCGCCTCGACCC

Product: CRISPR-associated Csd1 family protein

Products: NA

Alternate protein names: CRISPR-Associated Csd1 Family Protein; CRISPR-Associated RAMP Csd1 Family Protein; Csd1 Family CRISPR-Associated Protein; Crispr-Protein; CRISPR-Associated Protein; CRISPR-Associated Protein Csd2 Family; Crispr-Associated Protein Csd1 Family

Number of amino acids: Translated: 595; Mature: 595

Protein sequence:

>595_residues
MILSALNDYYQRLLEQGADGVSPFGYSQEKISYEILLSPDGEVVDVNDIRQVAGNKPIPRSLSVPQPEKRTSGTKSNFLW
DKTSYVLGVSSKDGGRTALEHAAFKELHLQALADEDDAGLQSLTKFLKQWEPQKFRPPTFSEEMLDTNVVFRLDGQQQYL
HESPAAQTVRAKLLASGDSRNGLCLVTGQQQPLARLHPAVKGVNGAQSSGASIVSFNLDAFTSYGKSQGENAPISEQVAF
AYTTVLNHLLRRDEHNRQRLQIGDASVVFWAQSADTQQSMQAETTFWSMLEPPSDDGQEAEKLRNVLSAVAQGRPLRELD
PQLEDRTRLFVLGLAPNASRLSIRFWESGDLESFARRLGEHFLDLHIEPPPWKTAPAIWRLLYATAPSRDGKAKAEDVPA
HLAGEMARAILTGRRYPQSLLATLIMRMRADGDISGVRVALCKAVIAREARLGGNKTNPEELPMSLDKEAANPGYRLGRL
FAVLEGAQRLALGDRINATIRDRYYGAASATPATIFPMLLRNAQNHLAKLRKDKPGLAVNLERDIAEIIGGLQSQFPRSL
RLEDQGRFAIGYYHQSQARFTRTPDPENLEQGAPA

Sequences:

>Translated_595_residues
MILSALNDYYQRLLEQGADGVSPFGYSQEKISYEILLSPDGEVVDVNDIRQVAGNKPIPRSLSVPQPEKRTSGTKSNFLW
DKTSYVLGVSSKDGGRTALEHAAFKELHLQALADEDDAGLQSLTKFLKQWEPQKFRPPTFSEEMLDTNVVFRLDGQQQYL
HESPAAQTVRAKLLASGDSRNGLCLVTGQQQPLARLHPAVKGVNGAQSSGASIVSFNLDAFTSYGKSQGENAPISEQVAF
AYTTVLNHLLRRDEHNRQRLQIGDASVVFWAQSADTQQSMQAETTFWSMLEPPSDDGQEAEKLRNVLSAVAQGRPLRELD
PQLEDRTRLFVLGLAPNASRLSIRFWESGDLESFARRLGEHFLDLHIEPPPWKTAPAIWRLLYATAPSRDGKAKAEDVPA
HLAGEMARAILTGRRYPQSLLATLIMRMRADGDISGVRVALCKAVIAREARLGGNKTNPEELPMSLDKEAANPGYRLGRL
FAVLEGAQRLALGDRINATIRDRYYGAASATPATIFPMLLRNAQNHLAKLRKDKPGLAVNLERDIAEIIGGLQSQFPRSL
RLEDQGRFAIGYYHQSQARFTRTPDPENLEQGAPA
>Mature_595_residues
MILSALNDYYQRLLEQGADGVSPFGYSQEKISYEILLSPDGEVVDVNDIRQVAGNKPIPRSLSVPQPEKRTSGTKSNFLW
DKTSYVLGVSSKDGGRTALEHAAFKELHLQALADEDDAGLQSLTKFLKQWEPQKFRPPTFSEEMLDTNVVFRLDGQQQYL
HESPAAQTVRAKLLASGDSRNGLCLVTGQQQPLARLHPAVKGVNGAQSSGASIVSFNLDAFTSYGKSQGENAPISEQVAF
AYTTVLNHLLRRDEHNRQRLQIGDASVVFWAQSADTQQSMQAETTFWSMLEPPSDDGQEAEKLRNVLSAVAQGRPLRELD
PQLEDRTRLFVLGLAPNASRLSIRFWESGDLESFARRLGEHFLDLHIEPPPWKTAPAIWRLLYATAPSRDGKAKAEDVPA
HLAGEMARAILTGRRYPQSLLATLIMRMRADGDISGVRVALCKAVIAREARLGGNKTNPEELPMSLDKEAANPGYRLGRL
FAVLEGAQRLALGDRINATIRDRYYGAASATPATIFPMLLRNAQNHLAKLRKDKPGLAVNLERDIAEIIGGLQSQFPRSL
RLEDQGRFAIGYYHQSQARFTRTPDPENLEQGAPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65817; Mature: 65817

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSALNDYYQRLLEQGADGVSPFGYSQEKISYEILLSPDGEVVDVNDIRQVAGNKPIPR
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHCCCCCCC
SLSVPQPEKRTSGTKSNFLWDKTSYVLGVSSKDGGRTALEHAAFKELHLQALADEDDAGL
CCCCCCCHHHCCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH
QSLTKFLKQWEPQKFRPPTFSEEMLDTNVVFRLDGQQQYLHESPAAQTVRAKLLASGDSR
HHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHCCCCC
NGLCLVTGQQQPLARLHPAVKGVNGAQSSGASIVSFNLDAFTSYGKSQGENAPISEQVAF
CCEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHCCCCCCCCCCCHHHHHH
AYTTVLNHLLRRDEHNRQRLQIGDASVVFWAQSADTQQSMQAETTFWSMLEPPSDDGQEA
HHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHH
EKLRNVLSAVAQGRPLRELDPQLEDRTRLFVLGLAPNASRLSIRFWESGDLESFARRLGE
HHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHH
HFLDLHIEPPPWKTAPAIWRLLYATAPSRDGKAKAEDVPAHLAGEMARAILTGRRYPQSL
HHEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCHHHH
LATLIMRMRADGDISGVRVALCKAVIAREARLGGNKTNPEELPMSLDKEAANPGYRLGRL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHCCCCCHHHHHH
FAVLEGAQRLALGDRINATIRDRYYGAASATPATIFPMLLRNAQNHLAKLRKDKPGLAVN
HHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
LERDIAEIIGGLQSQFPRSLRLEDQGRFAIGYYHQSQARFTRTPDPENLEQGAPA
CHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MILSALNDYYQRLLEQGADGVSPFGYSQEKISYEILLSPDGEVVDVNDIRQVAGNKPIPR
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHCCCCCCC
SLSVPQPEKRTSGTKSNFLWDKTSYVLGVSSKDGGRTALEHAAFKELHLQALADEDDAGL
CCCCCCCHHHCCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH
QSLTKFLKQWEPQKFRPPTFSEEMLDTNVVFRLDGQQQYLHESPAAQTVRAKLLASGDSR
HHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHCCCCC
NGLCLVTGQQQPLARLHPAVKGVNGAQSSGASIVSFNLDAFTSYGKSQGENAPISEQVAF
CCEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHCCCCCCCCCCCHHHHHH
AYTTVLNHLLRRDEHNRQRLQIGDASVVFWAQSADTQQSMQAETTFWSMLEPPSDDGQEA
HHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHH
EKLRNVLSAVAQGRPLRELDPQLEDRTRLFVLGLAPNASRLSIRFWESGDLESFARRLGE
HHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHH
HFLDLHIEPPPWKTAPAIWRLLYATAPSRDGKAKAEDVPAHLAGEMARAILTGRRYPQSL
HHEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCHHHH
LATLIMRMRADGDISGVRVALCKAVIAREARLGGNKTNPEELPMSLDKEAANPGYRLGRL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHCCCCCHHHHHH
FAVLEGAQRLALGDRINATIRDRYYGAASATPATIFPMLLRNAQNHLAKLRKDKPGLAVN
HHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
LERDIAEIIGGLQSQFPRSLRLEDQGRFAIGYYHQSQARFTRTPDPENLEQGAPA
CHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA