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The map label for this gene is 146284058

Identifier: 146284058

GI number: 146284058

Start: 4051153

End: 4051827

Strand: Direct

Name: 146284058

Synonym: PST_3746

Alternate gene names: NA

Gene position: 4051153-4051827 (Clockwise)

Preceding gene: 146284057

Following gene: 146284059

Centisome position: 88.7

GC content: 58.96

Gene sequence:

>675_bases
ATGGCCTATGGAATTCGCTTGAAAGTCTGGGGAGAGCGGGCCTGCTTCACCCGCCCAGAGATGAAAGTCGAACGGGTGTC
TTACGACGTCATCACCCCCTCCGCGGCGCGTGGCGTTCTCGAAGCCATTCATTGGAAACCGGCGATTCGCTGGGTCGTCG
ACCGCATACACGTCCTCAAGCCAATTCGTTTCGAATCGCTTCGCCGCAACGAAGTCGGCGGGAAACTATCTGCCGCCAGT
GTTGGCAGGGCAATGAAGGCTGGGCGCACCGAGGATCTGATCAGCCTGATCGAAGACGACCGACAGCAACGGGCCACCAC
CTTGCTGCGTGACGTCGCCTACGTTATCGAAGCGCACTTCGAATTGACCGAAAAGGCTGGCGCGGACGACTCGATTGGCA
AGCATCTGGACATATTCAATCGCCGCGCCCGCAAGGGCCAATGTTTCCATGCCCCCTGCCTGGGCGTGCGTGAATTCCCG
GCCAGTTTTCAGTTGCTGGAAGCCGACCAGGAACTACCCTCCACGGATGCAAGCCTGCTCGGCGAACATGACCTTGGCTG
GTTGCTGCATGACATCGATTTTGCCAATGACATGACGCCTCACTTCTTTCGCGCCCGGATGAACTCCGGCGTGATCGATG
TTCCTCCCTTCCTGGGCGAGGGGAGCAAGGCATGA

Upstream 100 bases:

>100_bases
TGGGGTTGCACTGCTCCACGGCGTGGGTTGAAACACGGAGCTTGTGGTGGATGAGGCGCCCCGGTTCGCCGGGGCGCCGT
TAACTAGGGAGAGCATCAGA

Downstream 100 bases:

>100_bases
TCCTTTCGGCATTGAACGACTACTATCAGCGGTTGCTGGAGCAAGGCGCGGACGGCGTTTCGCCCTTCGGCTACAGCCAG
GAAAAGATCAGTTATGAAAT

Product: CRISPR-associated Cas5d family protein

Products: NA

Alternate protein names: CRISPR-Associated Dvulg Subtype; CRISPR-Associated Cas5 Family Protein; CRISPR-Associated Csd1 Family Protein; Cas5 Family CRISPR-Associated Protein; CRISPR-Associated Cas5d Family Protein; CRISPR-Associated RAMP Csd5d Family Protein; CRISPR-Associated D; CRISPR-Associated Protein Csd5d Family; CRISPR-Associated Protein; Crispr- Family

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MAYGIRLKVWGERACFTRPEMKVERVSYDVITPSAARGVLEAIHWKPAIRWVVDRIHVLKPIRFESLRRNEVGGKLSAAS
VGRAMKAGRTEDLISLIEDDRQQRATTLLRDVAYVIEAHFELTEKAGADDSIGKHLDIFNRRARKGQCFHAPCLGVREFP
ASFQLLEADQELPSTDASLLGEHDLGWLLHDIDFANDMTPHFFRARMNSGVIDVPPFLGEGSKA

Sequences:

>Translated_224_residues
MAYGIRLKVWGERACFTRPEMKVERVSYDVITPSAARGVLEAIHWKPAIRWVVDRIHVLKPIRFESLRRNEVGGKLSAAS
VGRAMKAGRTEDLISLIEDDRQQRATTLLRDVAYVIEAHFELTEKAGADDSIGKHLDIFNRRARKGQCFHAPCLGVREFP
ASFQLLEADQELPSTDASLLGEHDLGWLLHDIDFANDMTPHFFRARMNSGVIDVPPFLGEGSKA
>Mature_223_residues
AYGIRLKVWGERACFTRPEMKVERVSYDVITPSAARGVLEAIHWKPAIRWVVDRIHVLKPIRFESLRRNEVGGKLSAASV
GRAMKAGRTEDLISLIEDDRQQRATTLLRDVAYVIEAHFELTEKAGADDSIGKHLDIFNRRARKGQCFHAPCLGVREFPA
SFQLLEADQELPSTDASLLGEHDLGWLLHDIDFANDMTPHFFRARMNSGVIDVPPFLGEGSKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25207; Mature: 25076

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYGIRLKVWGERACFTRPEMKVERVSYDVITPSAARGVLEAIHWKPAIRWVVDRIHVLK
CCCEEEEEEECCCCCCCCCCCHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PIRFESLRRNEVGGKLSAASVGRAMKAGRTEDLISLIEDDRQQRATTLLRDVAYVIEAHF
CHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELTEKAGADDSIGKHLDIFNRRARKGQCFHAPCLGVREFPASFQLLEADQELPSTDASLL
HHHHHCCCCCCHHHHHHHHHHHHCCCCEECCCCCCHHHCCCHHHHHHHHHCCCCCCHHHH
GEHDLGWLLHDIDFANDMTPHFFRARMNSGVIDVPPFLGEGSKA
CCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCEECCCCCCCCCCC
>Mature Secondary Structure 
AYGIRLKVWGERACFTRPEMKVERVSYDVITPSAARGVLEAIHWKPAIRWVVDRIHVLK
CCEEEEEEECCCCCCCCCCCHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PIRFESLRRNEVGGKLSAASVGRAMKAGRTEDLISLIEDDRQQRATTLLRDVAYVIEAHF
CHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELTEKAGADDSIGKHLDIFNRRARKGQCFHAPCLGVREFPASFQLLEADQELPSTDASLL
HHHHHCCCCCCHHHHHHHHHHHHCCCCEECCCCCCHHHCCCHHHHHHHHHCCCCCCHHHH
GEHDLGWLLHDIDFANDMTPHFFRARMNSGVIDVPPFLGEGSKA
CCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA