| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is ctpL [H]
Identifier: 146283963
GI number: 146283963
Start: 3939855
End: 3941816
Strand: Direct
Name: ctpL [H]
Synonym: PST_3649
Alternate gene names: 146283963
Gene position: 3939855-3941816 (Clockwise)
Preceding gene: 146283962
Following gene: 146283986
Centisome position: 86.26
GC content: 68.25
Gene sequence:
>1962_bases ATGCGCCTGAAGTCGCTCACCACTCTCAATACCCTGCTGCTGATCGCGGTGTGTCTGGCACTGGGCGCGACGCTCTGGTG GTCCGAGCGCGCCATGGAGCGCCCCTACCTGCTGATGGTGCGCTATCTGGCGCTGTCCCAGCAGTTTCAGCAGCAGGCGG TGGACAACATTCACGGCTACCTCGCCAGCGGTGACGCGCTGCGCCACAGCCAGGCGCAGCAGGCGCTCACCGAATTCGCC GATGACAGCAGCGCGCTACCGGAGGACCTGGCAGCGCGGCTGCGTCCCAGTCTCGCCGAACTGTCGCGCTTCACCGCCGA CGAGCTGCTGGCCGCGGGCAAGCTGGCCGGCGACCCGCAAGGGCTGCTGCTGCAGGCCGAGCGCGAAATGGCCGGCGTGC TCTCGCAGCTCGACGACTACCGCGCGCACGCCGATCATCCACGCGCCGCAGACTACCAGCGCCCCCTGTTCGCCGCCGGG CAGCAGCTGTTTCGTCTGAGCCACGCCCGCGGCAAGCTGGTGAGCAGCGGCCGTGACGAGCTGAACTCCGAGGTGGAGCA GGTGCTGCGCAGCCTGGAGCAGGAGGCAGCACGACTCGACACGCTGCCGCTGCTCGGCGTGCTAACCCAGAACCAGTCCG CCACCAGCACCTTTGCCGCGCTGCTCGACCTGGGGGCGGCAGCGGATCAGCACAGCGAAGACCGTGGCATTGCCCTCAAG CGCGAGTTCGCCAGCCTGATCAAGCGCTACCCGGCCGAGCTGCAGCGCACCCGCGAGCTGATCCGCCAGCGTAGCGCGCT GCTCGACAGCAGCGCGCAGAAGATCGCCAGCGTCGAGCAGGCGCTGGCCGCGCTGGAGCCCGCGGTACGGGCCGAACACA GCCGCATCCAGAGCGAAGTGCGCCTGATCCAGATCGGCATCATTGCGCTGATCCTGCTCATCGCTCTGGCCATCGACCGC CTGCAGCGTCAGCTGACTCGAGCCCTCGGCCAGCTGGTGCCGGCTTTGTCCAACTGGGCGCGAGGCGACTTCAGCGCAGA GGTACGCATCGCGAGCCGGATTCGCGAGATCGACGACATCGAGACCTCGCTGAACCAGCTGCGTACCTACCTGCTGGAAC TGGTCGGCACGCTGCGCAAGCAGGCGACGCGCGTCGCCGAAAGCAGCCGCAGCCTGGACGAGATGAGCAGCAGCCTGCAT GACGGCGCCCAGCGCCAGACCGGCGACACCGCGCAGATTCGCGACTCGCTCGGCGAGCTGGAGGCGACCATCCAGCAGGT GGCCGACGGCGCCGGCGAAGCCGCCCAAGCCAGCCGCGCAGCGGCGCGTGCGGTGCAGCACGGCCAGCAGGTCATCGGCG AGAGCCTGACCGGCCTGCGTGGGCTGGTCAGCGAGGTACAGGGCAACGCTGTGGCAATCGAACGACTGGCCGACGAAACC GTCACCATTGGCAAGGTCCTGACGGTCATTCGCGCGATTGCCGAGCAGACCAATCTGCTGGCGCTCAATGCGGCGATCGA AGCAGCCCGCGCCGGTGGTCACGGCCGCGGCTTCGCGGTGGTCGCGGACGAAGTGCGCTCACTGGCACAGCGTACCAGCG GGGCCACCGAGGAAATCCAGCAGCTGATCGGCCGTCTGCAGCAGGCCGCGCGGCAGTCCGTGGAGGCGATGCGCAGTCAG GTCGAGCATGCCGAAAGCACGGCCAGCCTGGCGCAAAGCGCCGATCAGGCCCTGGAACAGATCGTCTCGACCATAGCCAG CATCAACCATATGGCCGAGCAGATCGCCCAGGCCACGGCCCAGCAGGGCGAAGCGGTGGGCGAAATCCGCGGCCACAGCG AACGTATCCATCAGCTGGGCGATGCCAACCTGGGGCACATCAGCCGCGGCCGTGAGCAGAGCGCCGAGATGCTGCAACTG GGCAGCGAGCTGGATCGAGCGACCCAGGCCTTTCGCTTCTAG
Upstream 100 bases:
>100_bases TCGAGGGTCGTGTAGCGATCGTCGGAGCGGCCGGCTGTCACGCGAATGACATCAAACTGCCATACCCTGCAAGGCCTCCG AATTGCTTTGCGAGGCGAGC
Downstream 100 bases:
>100_bases CCGGCGCGCTTGCCGATGCGCGCTCCAGGCGATGCTCCGCTAGCGCGGCGCGACCGGACGCTGCGGCTTGCGGCCCTTGC CGGCGGGCTTGCCACCGTTG
Product: methyl-accepting chemotaxis transducer for inorganic phosphate CtpL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 653; Mature: 653
Protein sequence:
>653_residues MRLKSLTTLNTLLLIAVCLALGATLWWSERAMERPYLLMVRYLALSQQFQQQAVDNIHGYLASGDALRHSQAQQALTEFA DDSSALPEDLAARLRPSLAELSRFTADELLAAGKLAGDPQGLLLQAEREMAGVLSQLDDYRAHADHPRAADYQRPLFAAG QQLFRLSHARGKLVSSGRDELNSEVEQVLRSLEQEAARLDTLPLLGVLTQNQSATSTFAALLDLGAAADQHSEDRGIALK REFASLIKRYPAELQRTRELIRQRSALLDSSAQKIASVEQALAALEPAVRAEHSRIQSEVRLIQIGIIALILLIALAIDR LQRQLTRALGQLVPALSNWARGDFSAEVRIASRIREIDDIETSLNQLRTYLLELVGTLRKQATRVAESSRSLDEMSSSLH DGAQRQTGDTAQIRDSLGELEATIQQVADGAGEAAQASRAAARAVQHGQQVIGESLTGLRGLVSEVQGNAVAIERLADET VTIGKVLTVIRAIAEQTNLLALNAAIEAARAGGHGRGFAVVADEVRSLAQRTSGATEEIQQLIGRLQQAARQSVEAMRSQ VEHAESTASLAQSADQALEQIVSTIASINHMAEQIAQATAQQGEAVGEIRGHSERIHQLGDANLGHISRGREQSAEMLQL GSELDRATQAFRF
Sequences:
>Translated_653_residues MRLKSLTTLNTLLLIAVCLALGATLWWSERAMERPYLLMVRYLALSQQFQQQAVDNIHGYLASGDALRHSQAQQALTEFA DDSSALPEDLAARLRPSLAELSRFTADELLAAGKLAGDPQGLLLQAEREMAGVLSQLDDYRAHADHPRAADYQRPLFAAG QQLFRLSHARGKLVSSGRDELNSEVEQVLRSLEQEAARLDTLPLLGVLTQNQSATSTFAALLDLGAAADQHSEDRGIALK REFASLIKRYPAELQRTRELIRQRSALLDSSAQKIASVEQALAALEPAVRAEHSRIQSEVRLIQIGIIALILLIALAIDR LQRQLTRALGQLVPALSNWARGDFSAEVRIASRIREIDDIETSLNQLRTYLLELVGTLRKQATRVAESSRSLDEMSSSLH DGAQRQTGDTAQIRDSLGELEATIQQVADGAGEAAQASRAAARAVQHGQQVIGESLTGLRGLVSEVQGNAVAIERLADET VTIGKVLTVIRAIAEQTNLLALNAAIEAARAGGHGRGFAVVADEVRSLAQRTSGATEEIQQLIGRLQQAARQSVEAMRSQ VEHAESTASLAQSADQALEQIVSTIASINHMAEQIAQATAQQGEAVGEIRGHSERIHQLGDANLGHISRGREQSAEMLQL GSELDRATQAFRF >Mature_653_residues MRLKSLTTLNTLLLIAVCLALGATLWWSERAMERPYLLMVRYLALSQQFQQQAVDNIHGYLASGDALRHSQAQQALTEFA DDSSALPEDLAARLRPSLAELSRFTADELLAAGKLAGDPQGLLLQAEREMAGVLSQLDDYRAHADHPRAADYQRPLFAAG QQLFRLSHARGKLVSSGRDELNSEVEQVLRSLEQEAARLDTLPLLGVLTQNQSATSTFAALLDLGAAADQHSEDRGIALK REFASLIKRYPAELQRTRELIRQRSALLDSSAQKIASVEQALAALEPAVRAEHSRIQSEVRLIQIGIIALILLIALAIDR LQRQLTRALGQLVPALSNWARGDFSAEVRIASRIREIDDIETSLNQLRTYLLELVGTLRKQATRVAESSRSLDEMSSSLH DGAQRQTGDTAQIRDSLGELEATIQQVADGAGEAAQASRAAARAVQHGQQVIGESLTGLRGLVSEVQGNAVAIERLADET VTIGKVLTVIRAIAEQTNLLALNAAIEAARAGGHGRGFAVVADEVRSLAQRTSGATEEIQQLIGRLQQAARQSVEAMRSQ VEHAESTASLAQSADQALEQIVSTIASINHMAEQIAQATAQQGEAVGEIRGHSERIHQLGDANLGHISRGREQSAEMLQL GSELDRATQAFRF
Specific function: May form a pore through which the hemolysin can be exported [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI1788195, Length=289, Percent_Identity=29.0657439446367, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI2367378, Length=338, Percent_Identity=27.2189349112426, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI1787690, Length=357, Percent_Identity=30.5322128851541, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1788194, Length=307, Percent_Identity=29.3159609120521, Blast_Score=99, Evalue=1e-21, Organism=Escherichia coli, GI1789453, Length=247, Percent_Identity=30.3643724696356, Blast_Score=96, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR004089 - InterPro: IPR003660 - InterPro: IPR000727 [H]
Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 70811; Mature: 70811
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKSLTTLNTLLLIAVCLALGATLWWSERAMERPYLLMVRYLALSQQFQQQAVDNIHGY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LASGDALRHSQAQQALTEFADDSSALPEDLAARLRPSLAELSRFTADELLAAGKLAGDPQ HCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCC GLLLQAEREMAGVLSQLDDYRAHADHPRAADYQRPLFAAGQQLFRLSHARGKLVSSGRDE CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH LNSEVEQVLRSLEQEAARLDTLPLLGVLTQNQSATSTFAALLDLGAAADQHSEDRGIALK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH REFASLIKRYPAELQRTRELIRQRSALLDSSAQKIASVEQALAALEPAVRAEHSRIQSEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLIQIGIIALILLIALAIDRLQRQLTRALGQLVPALSNWARGDFSAEVRIASRIREIDDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ETSLNQLRTYLLELVGTLRKQATRVAESSRSLDEMSSSLHDGAQRQTGDTAQIRDSLGEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHH EATIQQVADGAGEAAQASRAAARAVQHGQQVIGESLTGLRGLVSEVQGNAVAIERLADET HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VTIGKVLTVIRAIAEQTNLLALNAAIEAARAGGHGRGFAVVADEVRSLAQRTSGATEEIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH QLIGRLQQAARQSVEAMRSQVEHAESTASLAQSADQALEQIVSTIASINHMAEQIAQATA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQGEAVGEIRGHSERIHQLGDANLGHISRGREQSAEMLQLGSELDRATQAFRF HHCHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRLKSLTTLNTLLLIAVCLALGATLWWSERAMERPYLLMVRYLALSQQFQQQAVDNIHGY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LASGDALRHSQAQQALTEFADDSSALPEDLAARLRPSLAELSRFTADELLAAGKLAGDPQ HCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCC GLLLQAEREMAGVLSQLDDYRAHADHPRAADYQRPLFAAGQQLFRLSHARGKLVSSGRDE CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH LNSEVEQVLRSLEQEAARLDTLPLLGVLTQNQSATSTFAALLDLGAAADQHSEDRGIALK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH REFASLIKRYPAELQRTRELIRQRSALLDSSAQKIASVEQALAALEPAVRAEHSRIQSEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLIQIGIIALILLIALAIDRLQRQLTRALGQLVPALSNWARGDFSAEVRIASRIREIDDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ETSLNQLRTYLLELVGTLRKQATRVAESSRSLDEMSSSLHDGAQRQTGDTAQIRDSLGEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHH EATIQQVADGAGEAAQASRAAARAVQHGQQVIGESLTGLRGLVSEVQGNAVAIERLADET HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VTIGKVLTVIRAIAEQTNLLALNAAIEAARAGGHGRGFAVVADEVRSLAQRTSGATEEIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH QLIGRLQQAARQSVEAMRSQVEHAESTASLAQSADQALEQIVSTIASINHMAEQIAQATA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQGEAVGEIRGHSERIHQLGDANLGHISRGREQSAEMLQLGSELDRATQAFRF HHCHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2162464; 10952301 [H]