| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is ydeG [H]
Identifier: 146283911
GI number: 146283911
Start: 3882909
End: 3884090
Strand: Direct
Name: ydeG [H]
Synonym: PST_3594
Alternate gene names: 146283911
Gene position: 3882909-3884090 (Clockwise)
Preceding gene: 146283910
Following gene: 146283914
Centisome position: 85.01
GC content: 69.04
Gene sequence:
>1182_bases ATGCATCTTTTGCTCAGCAATCCCCAGGTCCTGCGCCTGTTCATCGCCCAGGCGCTGTTCTGGTCCTGTTCGATGACCGG GATCATCTTCACCGCCATCGTCGGCCTGCGCCTGGCGCCAGCGGCCGGTCTCGCCACCCTGCCGCTGGCCCTGCTGATGC TCGGCGGCCTGCTCGCCCTGCAACCACTGGCGGGCCTGATGCAACGCCGCGGTCGCCGCGCCGGCTTTCTCATCGGTGCG TTGGCCGGCGTACTGGGCGGGCTGATCAGCGCGCTGTCGCTCTGGCTCGACAGCTTCACCCTGCTCTGTGTCGGCGCTCT GCCCATTGGCGCCTATCAGGCCTCGGCGATGTATTACCGCTTCGCCGCGCTGGAAGCGGTGAGCGATGCCTTCAAGGGTC GCGCCACGGCCTGCGTGATCGGCGGTGGTGTGCTGGCGGCGCTGATCGCGCCCACCCTCGGCCATATGGCGCGCGATCTC GCTGACGTGCCCTTCGCCGGCACCTATCTGTTGATCGCCAGTCTGGCGGCACTGGGGTTCATGGTCTTGGCCGGGCTGCC GGCGACCTCGGGAAAGCCGGCGACCCCGGCCGATACGGCAGCGGTCAGCTGGCAGGCGCTGCTCGCACGGCCGACCATTC GCGCCGCGGTGCTGACCACCGCTGCTGGACACGGCCTGATGATCCTGGTGATGAACGCCACGCCCCTGGCGATGCATGGC GAAGGTCTGGATCTGCACGACAGCGGCCAGGTCATCCAGTGGCACATGCTCGGCATGTTCCTCCCGGCGTTCGTCGCCGG GCCGCTGGTGGATCGCTTCGGCTGCCGGCTGGTCGCCTGCCTTGGCGGAGGACTGCTGATCGTCAGCGCGGTGGTCGCCC TGCTCGGCGTCAGCCACTGGCACTTCCTGCTCAGCAGCTGCCTGCTCGGCATCGGCTGGAACCTCATGCTCGTCGCCGGC ACCACTCAGCTGGGCCAGGGCCACGCCGCGAGCGAACGCGCCCGGGCACAGGGCCTGATGGAGCTGAGCAACGGCAGCGT CGCCGCAGCCATGTCGTTCGCCTCCGGCGCGCTGATCGCCCAGGCGGGCTGGGCGGCGGTGAACATCGGGCTGCTGCCCA TCGTGACGCTGGTGGTACTGCTGCAGGTTGCGCAGGGCTATCGGCAAAGGCAGGCGGCGTAA
Upstream 100 bases:
>100_bases AGCGCTTCGGCTGACCAACCGACCTCATTCACCGTTCCCAGCCCGCTCGGCATCTGGCCAGGCAGCACTGTGCCCGCTCG CCACCCTAAAGGAGCCGCTC
Downstream 100 bases:
>100_bases CGCTGCGCCGCCGGAGGCGCGTTCAGGACAGTTTCTGCTCGGAAATCAGGTGGATGATATTCGCCGGGCTCGATATCCAG AACGCGCGGAAGCCGTCAGG
Product: MFS family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MHLLLSNPQVLRLFIAQALFWSCSMTGIIFTAIVGLRLAPAAGLATLPLALLMLGGLLALQPLAGLMQRRGRRAGFLIGA LAGVLGGLISALSLWLDSFTLLCVGALPIGAYQASAMYYRFAALEAVSDAFKGRATACVIGGGVLAALIAPTLGHMARDL ADVPFAGTYLLIASLAALGFMVLAGLPATSGKPATPADTAAVSWQALLARPTIRAAVLTTAAGHGLMILVMNATPLAMHG EGLDLHDSGQVIQWHMLGMFLPAFVAGPLVDRFGCRLVACLGGGLLIVSAVVALLGVSHWHFLLSSCLLGIGWNLMLVAG TTQLGQGHAASERARAQGLMELSNGSVAAAMSFASGALIAQAGWAAVNIGLLPIVTLVVLLQVAQGYRQRQAA
Sequences:
>Translated_393_residues MHLLLSNPQVLRLFIAQALFWSCSMTGIIFTAIVGLRLAPAAGLATLPLALLMLGGLLALQPLAGLMQRRGRRAGFLIGA LAGVLGGLISALSLWLDSFTLLCVGALPIGAYQASAMYYRFAALEAVSDAFKGRATACVIGGGVLAALIAPTLGHMARDL ADVPFAGTYLLIASLAALGFMVLAGLPATSGKPATPADTAAVSWQALLARPTIRAAVLTTAAGHGLMILVMNATPLAMHG EGLDLHDSGQVIQWHMLGMFLPAFVAGPLVDRFGCRLVACLGGGLLIVSAVVALLGVSHWHFLLSSCLLGIGWNLMLVAG TTQLGQGHAASERARAQGLMELSNGSVAAAMSFASGALIAQAGWAAVNIGLLPIVTLVVLLQVAQGYRQRQAA >Mature_393_residues MHLLLSNPQVLRLFIAQALFWSCSMTGIIFTAIVGLRLAPAAGLATLPLALLMLGGLLALQPLAGLMQRRGRRAGFLIGA LAGVLGGLISALSLWLDSFTLLCVGALPIGAYQASAMYYRFAALEAVSDAFKGRATACVIGGGVLAALIAPTLGHMARDL ADVPFAGTYLLIASLAALGFMVLAGLPATSGKPATPADTAAVSWQALLARPTIRAAVLTTAAGHGLMILVMNATPLAMHG EGLDLHDSGQVIQWHMLGMFLPAFVAGPLVDRFGCRLVACLGGGLLIVSAVVALLGVSHWHFLLSSCLLGIGWNLMLVAG TTQLGQGHAASERARAQGLMELSNGSVAAAMSFASGALIAQAGWAAVNIGLLPIVTLVVLLQVAQGYRQRQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 40383; Mature: 40383
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLLLSNPQVLRLFIAQALFWSCSMTGIIFTAIVGLRLAPAAGLATLPLALLMLGGLLAL CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH QPLAGLMQRRGRRAGFLIGALAGVLGGLISALSLWLDSFTLLCVGALPIGAYQASAMYYR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FAALEAVSDAFKGRATACVIGGGVLAALIAPTLGHMARDLADVPFAGTYLLIASLAALGF HHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH MVLAGLPATSGKPATPADTAAVSWQALLARPTIRAAVLTTAAGHGLMILVMNATPLAMHG HHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCEEECC EGLDLHDSGQVIQWHMLGMFLPAFVAGPLVDRFGCRLVACLGGGLLIVSAVVALLGVSHW CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH HFLLSSCLLGIGWNLMLVAGTTQLGQGHAASERARAQGLMELSNGSVAAAMSFASGALIA HHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHH QAGWAAVNIGLLPIVTLVVLLQVAQGYRQRQAA HCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHLLLSNPQVLRLFIAQALFWSCSMTGIIFTAIVGLRLAPAAGLATLPLALLMLGGLLAL CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH QPLAGLMQRRGRRAGFLIGALAGVLGGLISALSLWLDSFTLLCVGALPIGAYQASAMYYR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FAALEAVSDAFKGRATACVIGGGVLAALIAPTLGHMARDLADVPFAGTYLLIASLAALGF HHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH MVLAGLPATSGKPATPADTAAVSWQALLARPTIRAAVLTTAAGHGLMILVMNATPLAMHG HHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCEEECC EGLDLHDSGQVIQWHMLGMFLPAFVAGPLVDRFGCRLVACLGGGLLIVSAVVALLGVSHW CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH HFLLSSCLLGIGWNLMLVAGTTQLGQGHAASERARAQGLMELSNGSVAAAMSFASGALIA HHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHH QAGWAAVNIGLLPIVTLVVLLQVAQGYRQRQAA HCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]