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The map label for this gene is codA [H]

Identifier: 146283887

GI number: 146283887

Start: 3863234

End: 3864469

Strand: Direct

Name: codA [H]

Synonym: PST_3570

Alternate gene names: 146283887

Gene position: 3863234-3864469 (Clockwise)

Preceding gene: 146283886

Following gene: 146283890

Centisome position: 84.58

GC content: 66.02

Gene sequence:

>1236_bases
ATGAACATCCTCAACGCCCGCCTGCGCGGCCGCAGCGGCCTCTACCGCATCGAACTGGACGGCGCGCGCATCGCCGCCAT
CAGCGCGCAGCAGGCGCCGGCCGAAGCCAACGAGGGCGACATCGACGCCGCCAGCAATCTGGTGGTGCCGCCCTTCATCG
AACCGCACATCCATCTGGACGCCACCCTGACCGCCGGCGAGCCGGCCTGGAACATGAGCGGCACGCTGTTCGAAGGCATC
GAACGCTGGGGCGAGCGCAAGGCGCTGGTGACCCACGAAGACACCAAGGCGCGGGCGAAAAAGACCATCGACATGCTGGT
CGACCACGGCATCCAGCATGTGCGCACCCATGTCGACGTCACCGATCCGACGCTGTCGGCGCTCAAATCCATGCTCGAAG
TGCGCGAGGAAACCCGCCACCTGATCGACCTGCAGATCGTCGCCTTTCCGCAGGAGGGCATCGAGTCGTTCAAGGGCGGT
CGCGAGCTGATGACCGAGGCGATCGCCATGGGCGCCGATGTGGTCGGCGGCATTCCACACTTCGAGAACACCCGCGACCA
GGGCGTCAGCTCGATCAAGTTCCTCATGGACCTCGCCGAGCGCAGCGGCTGCCTGGTGGACGTGCATTGCGACGAAACAG
ACGACCCACAGTCACGCTTTCTCGAAGTGCTCGCCGAAGAGGCGCGGGTGCGCGAGATGGGCGAGCGGGTCACCGCCAGC
CACACCACGGCGATGGGCTCCTACGACAACGCCTACTGCTCCAAGCTGTTCCGCCTGCTGAAGCTGTCGCAGATCAACTT
CGTCTCCTGCCCGACCGAGAGCATCCACCTGCAAGGCCGCTTCGACACCTACCCCAAGCGCCGGGGCCTGACCCGCGTGG
CCGAGATCGACCGCGCCGGGATGAACGTATGCTTCGGCCAGGATTCCATCGTCGACCCCTGGTACCCGCTGGGCAACGGC
AACATCCTGCGCATCCTCGAAGCTGGGCTGCACATCTGCCACATGCTCGGCTACGAGGACCTGCAGCGCGGCCTGGACCT
GATCACCGACAACAGCGCACGCACCCTGAACCTGGGCGAGCGCTACGGACTGGAAGTGGGGCGTCCGGCCAACCTGCTGG
TGCTGTCGGCAGCGGACGACTACGAGATGCTGCGCACCCAGGGCCATGCCCTGCTCTCGGTGCGCAACGGTGAGGTGCTG
ATGCGCCGCACGCCGGCGCAGATCAAGCGTTACTGA

Upstream 100 bases:

>100_bases
GTGGCCGCCGCAGCCTATATTGTGCTGTACGAGGGCCAGCGCCTGGCCCTGTCGCGCACGGTGCTGACGCAAACCGACGC
ACGCTGATCAAGGAGCCACC

Downstream 100 bases:

>100_bases
GCGGCGGCGGTGGTCTTGCGCAGACGGTTGATGTTGGCCATTTCCTCGGCCGGCGTCAGCTTCAGCTGCGACAGATAGGC
CGCCAGCGCCTCCACGTCCG

Product: cytosine deaminase

Products: NA

Alternate protein names: Cytosine aminohydrolase [H]

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MNILNARLRGRSGLYRIELDGARIAAISAQQAPAEANEGDIDAASNLVVPPFIEPHIHLDATLTAGEPAWNMSGTLFEGI
ERWGERKALVTHEDTKARAKKTIDMLVDHGIQHVRTHVDVTDPTLSALKSMLEVREETRHLIDLQIVAFPQEGIESFKGG
RELMTEAIAMGADVVGGIPHFENTRDQGVSSIKFLMDLAERSGCLVDVHCDETDDPQSRFLEVLAEEARVREMGERVTAS
HTTAMGSYDNAYCSKLFRLLKLSQINFVSCPTESIHLQGRFDTYPKRRGLTRVAEIDRAGMNVCFGQDSIVDPWYPLGNG
NILRILEAGLHICHMLGYEDLQRGLDLITDNSARTLNLGERYGLEVGRPANLLVLSAADDYEMLRTQGHALLSVRNGEVL
MRRTPAQIKRY

Sequences:

>Translated_411_residues
MNILNARLRGRSGLYRIELDGARIAAISAQQAPAEANEGDIDAASNLVVPPFIEPHIHLDATLTAGEPAWNMSGTLFEGI
ERWGERKALVTHEDTKARAKKTIDMLVDHGIQHVRTHVDVTDPTLSALKSMLEVREETRHLIDLQIVAFPQEGIESFKGG
RELMTEAIAMGADVVGGIPHFENTRDQGVSSIKFLMDLAERSGCLVDVHCDETDDPQSRFLEVLAEEARVREMGERVTAS
HTTAMGSYDNAYCSKLFRLLKLSQINFVSCPTESIHLQGRFDTYPKRRGLTRVAEIDRAGMNVCFGQDSIVDPWYPLGNG
NILRILEAGLHICHMLGYEDLQRGLDLITDNSARTLNLGERYGLEVGRPANLLVLSAADDYEMLRTQGHALLSVRNGEVL
MRRTPAQIKRY
>Mature_411_residues
MNILNARLRGRSGLYRIELDGARIAAISAQQAPAEANEGDIDAASNLVVPPFIEPHIHLDATLTAGEPAWNMSGTLFEGI
ERWGERKALVTHEDTKARAKKTIDMLVDHGIQHVRTHVDVTDPTLSALKSMLEVREETRHLIDLQIVAFPQEGIESFKGG
RELMTEAIAMGADVVGGIPHFENTRDQGVSSIKFLMDLAERSGCLVDVHCDETDDPQSRFLEVLAEEARVREMGERVTAS
HTTAMGSYDNAYCSKLFRLLKLSQINFVSCPTESIHLQGRFDTYPKRRGLTRVAEIDRAGMNVCFGQDSIVDPWYPLGNG
NILRILEAGLHICHMLGYEDLQRGLDLITDNSARTLNLGERYGLEVGRPANLLVLSAADDYEMLRTQGHALLSVRNGEVL
MRRTPAQIKRY

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=409, Percent_Identity=57.9462102689486, Blast_Score=492, Evalue=1e-140,
Organism=Escherichia coli, GI1786517, Length=383, Percent_Identity=24.8041775456919, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.4.1 [H]

Molecular weight: Translated: 45698; Mature: 45698

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILNARLRGRSGLYRIELDGARIAAISAQQAPAEANEGDIDAASNLVVPPFIEPHIHLD
CCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCEEEE
ATLTAGEPAWNMSGTLFEGIERWGERKALVTHEDTKARAKKTIDMLVDHGIQHVRTHVDV
EEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
TDPTLSALKSMLEVREETRHLIDLQIVAFPQEGIESFKGGRELMTEAIAMGADVVGGIPH
CCHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHCCCHHHHHHHHHHCHHHHCCCCC
FENTRDQGVSSIKFLMDLAERSGCLVDVHCDETDDPQSRFLEVLAEEARVREMGERVTAS
CCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HTTAMGSYDNAYCSKLFRLLKLSQINFVSCPTESIHLQGRFDTYPKRRGLTRVAEIDRAG
HHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCHHCCCHHHHHHHHCC
MNVCFGQDSIVDPWYPLGNGNILRILEAGLHICHMLGYEDLQRGLDLITDNSARTLNLGE
CEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCHHHHHCCHHEEECCCCCEEECHH
RYGLEVGRPANLLVLSAADDYEMLRTQGHALLSVRNGEVLMRRTPAQIKRY
HHCCCCCCCCCEEEEECCCCHHHHHHCCCEEEEEECCCEEEECCCHHHCCC
>Mature Secondary Structure
MNILNARLRGRSGLYRIELDGARIAAISAQQAPAEANEGDIDAASNLVVPPFIEPHIHLD
CCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCEEEE
ATLTAGEPAWNMSGTLFEGIERWGERKALVTHEDTKARAKKTIDMLVDHGIQHVRTHVDV
EEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
TDPTLSALKSMLEVREETRHLIDLQIVAFPQEGIESFKGGRELMTEAIAMGADVVGGIPH
CCHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHCCCHHHHHHHHHHCHHHHCCCCC
FENTRDQGVSSIKFLMDLAERSGCLVDVHCDETDDPQSRFLEVLAEEARVREMGERVTAS
CCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HTTAMGSYDNAYCSKLFRLLKLSQINFVSCPTESIHLQGRFDTYPKRRGLTRVAEIDRAG
HHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCHHCCCHHHHHHHHCC
MNVCFGQDSIVDPWYPLGNGNILRILEAGLHICHMLGYEDLQRGLDLITDNSARTLNLGE
CEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCHHHHHCCHHEEECCCCCEEECHH
RYGLEVGRPANLLVLSAADDYEMLRTQGHALLSVRNGEVLMRRTPAQIKRY
HHCCCCCCCCCEEEEECCCCHHHHHHCCCEEEEEECCCEEEECCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1640834; 8450832; 9278503 [H]