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The map label for this gene is vdlD [H]

Identifier: 146283890

GI number: 146283890

Start: 3865514

End: 3865990

Strand: Direct

Name: vdlD [H]

Synonym: PST_3573

Alternate gene names: 146283890

Gene position: 3865514-3865990 (Clockwise)

Preceding gene: 146283887

Following gene: 146283891

Centisome position: 84.63

GC content: 63.1

Gene sequence:

>477_bases
ATGACCGTGCTGATGACGCCGGACAAAGCCAATTTTTCCGGCAACGTACATGGCGGCACGCTGCTCAAGTATCTCGACGA
AGTCGCCTATGCCTGCGCCAGCCGTTACGCCGGGCAGTACGTCGTCACCCTCTCGGTGGACCAGGTAGTGTTCCGTCAGC
CAGTGCACGTGGGCGAGCTGGTCACATTCCTCGCCTCGGTCAACTACACCGGCACCACGTCGATGGAGATCGGCATCAAG
GTGGTGACCGAAGACATCCGCTCGAAGACGGTACGTCACACCAACAGCTGCTTCTTCACCATGGTCGCCCTCGGCGAGGA
CGGCAAACCGGTGCCGGTGCCGCCGCTGAATCCAAAAACCCCCGAGCAGCAGCGCCGCTTCGCCCAGGCCTACCAGCGCC
GCGAGATCCGTCGTGAGCTGGAACACCGCTACAGCGAGCTGCGTGCCGGTAACGAGCGCCTCGCCGCCGTGCAGTAA

Upstream 100 bases:

>100_bases
CCAGATAGGCCAGACAGACGGGAGGTATTCGACTAAAGTAGCAACCCTTCACCACCGAGGAGCCGTAACCCCCATGCTAG
ATGGACATGCAGAGCTGACC

Downstream 100 bases:

>100_bases
GCTGCAGCCCGGAATCGACGTGGTCCTGGCCGGCCTGGTGGCCACGTCGCCCGTTTTGTAACAAAACCTTATACAATGCA
CGGCTTTCCGCACATTCCAT

Product: cytosolic long-chain acyl-CoA thioester hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTVLMTPDKANFSGNVHGGTLLKYLDEVAYACASRYAGQYVVTLSVDQVVFRQPVHVGELVTFLASVNYTGTTSMEIGIK
VVTEDIRSKTVRHTNSCFFTMVALGEDGKPVPVPPLNPKTPEQQRRFAQAYQRREIRRELEHRYSELRAGNERLAAVQ

Sequences:

>Translated_158_residues
MTVLMTPDKANFSGNVHGGTLLKYLDEVAYACASRYAGQYVVTLSVDQVVFRQPVHVGELVTFLASVNYTGTTSMEIGIK
VVTEDIRSKTVRHTNSCFFTMVALGEDGKPVPVPPLNPKTPEQQRRFAQAYQRREIRRELEHRYSELRAGNERLAAVQ
>Mature_157_residues
TVLMTPDKANFSGNVHGGTLLKYLDEVAYACASRYAGQYVVTLSVDQVVFRQPVHVGELVTFLASVNYTGTTSMEIGIKV
VTEDIRSKTVRHTNSCFFTMVALGEDGKPVPVPPLNPKTPEQQRRFAQAYQRREIRRELEHRYSELRAGNERLAAVQ

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI32528284, Length=132, Percent_Identity=34.0909090909091, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI32528286, Length=132, Percent_Identity=34.0909090909091, Blast_Score=85, Evalue=2e-17,
Organism=Homo sapiens, GI32528282, Length=132, Percent_Identity=34.0909090909091, Blast_Score=85, Evalue=2e-17,
Organism=Homo sapiens, GI75709208, Length=132, Percent_Identity=34.0909090909091, Blast_Score=85, Evalue=3e-17,
Organism=Homo sapiens, GI22165355, Length=142, Percent_Identity=33.0985915492958, Blast_Score=81, Evalue=4e-16,
Organism=Homo sapiens, GI22165400, Length=137, Percent_Identity=35.036496350365, Blast_Score=80, Evalue=5e-16,
Organism=Homo sapiens, GI18640736, Length=147, Percent_Identity=30.6122448979592, Blast_Score=76, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 17733; Mature: 17602

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLMTPDKANFSGNVHGGTLLKYLDEVAYACASRYAGQYVVTLSVDQVVFRQPVHVGEL
CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCHHHH
VTFLASVNYTGTTSMEIGIKVVTEDIRSKTVRHTNSCFFTMVALGEDGKPVPVPPLNPKT
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCC
PEQQRRFAQAYQRREIRRELEHRYSELRAGNERLAAVQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC
>Mature Secondary Structure 
TVLMTPDKANFSGNVHGGTLLKYLDEVAYACASRYAGQYVVTLSVDQVVFRQPVHVGEL
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCHHHH
VTFLASVNYTGTTSMEIGIKVVTEDIRSKTVRHTNSCFFTMVALGEDGKPVPVPPLNPKT
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCC
PEQQRRFAQAYQRREIRRELEHRYSELRAGNERLAAVQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]