| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146283683
Identifier: 146283683
GI number: 146283683
Start: 3646503
End: 3647051
Strand: Direct
Name: 146283683
Synonym: PST_3366
Alternate gene names: NA
Gene position: 3646503-3647051 (Clockwise)
Preceding gene: 146283682
Following gene: 146283684
Centisome position: 79.84
GC content: 62.48
Gene sequence:
>549_bases ATGCTCGTCCCGCTCACCTACACCGTAATCAAGCGCAGCGCTACGCTGCGCCGCGCATTCACCAGGAAGCATGGCTTCGG CGCATTGCTGCAGGCGCACGTCTATTTCGGCTTGGTAGGCGCGCTGTTGGCCATCCTCCATAGCGGGCACAAGTTCCAGA GTGCGCTCGGCGTCGCGCTGACGGCATCGATGCTGCTGAGCGTGCTCACTGGGTTCATCGGCCAGCATTACCTGCGCTAC GTCGCGGAGAACATCCGCGAGAAGAAGGCGCAGATCGACGGGCTGTGGCGCCTTCTGGATGGGCAGTACTGGGCCTACGC GCAAGGACCAACAGCGGGCGTTGCCGGTACGCCCAAGGCCAGCGCCGAACTGCTGCCACTGGCATCCGCCGCCGCCGATC TGCAGTACTCGATCCAGTTCCAGGAGCGGGTGCGCAGGCTGTTCAACGCCTGGCTGTCGGCACACATCGCGTTCTCGATC ATCTTCTATCTTCTGCTGGCGTTGCATATCTGGGCTGGCATCTACTTCGGGTTGCGGTGGTTCAGATGA
Upstream 100 bases:
>100_bases GATGCTGGTGGTCCTGTGGCTGGGTTTCCTGGTGCACCGCTCTTCCTTCTTCGCCGGAAGCCTCCTGGGTGGCGTGTTCG GCGTCGTAGGCGCGGCGTTC
Downstream 100 bases:
>100_bases GTCGAAAGGGAAAGATCCTCGCCGCGCTGCTCGCGGTCCTGGCGCCGGTGTCGGCAGTCGCACTGTGGACATACCTTCCG CAAATGCAGCGCGCCGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MLVPLTYTVIKRSATLRRAFTRKHGFGALLQAHVYFGLVGALLAILHSGHKFQSALGVALTASMLLSVLTGFIGQHYLRY VAENIREKKAQIDGLWRLLDGQYWAYAQGPTAGVAGTPKASAELLPLASAAADLQYSIQFQERVRRLFNAWLSAHIAFSI IFYLLLALHIWAGIYFGLRWFR
Sequences:
>Translated_182_residues MLVPLTYTVIKRSATLRRAFTRKHGFGALLQAHVYFGLVGALLAILHSGHKFQSALGVALTASMLLSVLTGFIGQHYLRY VAENIREKKAQIDGLWRLLDGQYWAYAQGPTAGVAGTPKASAELLPLASAAADLQYSIQFQERVRRLFNAWLSAHIAFSI IFYLLLALHIWAGIYFGLRWFR >Mature_182_residues MLVPLTYTVIKRSATLRRAFTRKHGFGALLQAHVYFGLVGALLAILHSGHKFQSALGVALTASMLLSVLTGFIGQHYLRY VAENIREKKAQIDGLWRLLDGQYWAYAQGPTAGVAGTPKASAELLPLASAAADLQYSIQFQERVRRLFNAWLSAHIAFSI IFYLLLALHIWAGIYFGLRWFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20336; Mature: 20336
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVPLTYTVIKRSATLRRAFTRKHGFGALLQAHVYFGLVGALLAILHSGHKFQSALGVAL CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH TASMLLSVLTGFIGQHYLRYVAENIREKKAQIDGLWRLLDGQYWAYAQGPTAGVAGTPKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC SAELLPLASAAADLQYSIQFQERVRRLFNAWLSAHIAFSIIFYLLLALHIWAGIYFGLRW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FR CC >Mature Secondary Structure MLVPLTYTVIKRSATLRRAFTRKHGFGALLQAHVYFGLVGALLAILHSGHKFQSALGVAL CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH TASMLLSVLTGFIGQHYLRYVAENIREKKAQIDGLWRLLDGQYWAYAQGPTAGVAGTPKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC SAELLPLASAAADLQYSIQFQERVRRLFNAWLSAHIAFSIIFYLLLALHIWAGIYFGLRW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA