| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146283684
Identifier: 146283684
GI number: 146283684
Start: 3647048
End: 3647851
Strand: Direct
Name: 146283684
Synonym: PST_3367
Alternate gene names: NA
Gene position: 3647048-3647851 (Clockwise)
Preceding gene: 146283683
Following gene: 146283685
Centisome position: 79.85
GC content: 63.68
Gene sequence:
>804_bases ATGAGTCGAAAGGGAAAGATCCTCGCCGCGCTGCTCGCGGTCCTGGCGCCGGTGTCGGCAGTCGCACTGTGGACATACCT TCCGCAAATGCAGCGCGCCGCGACGTGGCAGAACATGGCCTCTCCGGGCCCCCTGTCCAGCGCACATGCGTTTCTCAAAG AGGACTGTGCGGCGTGCCACACGCCGGTGAAGGGCGTGGAGGACGCGACTTGCGTGGCCTGCCATGCAAACGAGACCGTC CTGGTCCAGCGACAACCGACGGCATTCCATGCCGACATCGCCGGCTCGAACAACTGCGTGGCCTGCCACAAGGAACACGA CGCCGGCCGCAGCCTGCGTGGTATGGACCATGCGGCTTTGACCGACATCATCGTGCGATGGCTCGATCGGGCCCCGGAGG GTCATGAGGGGGCGGTGCTGCTCGCGCACCTCAAGGCACACCGGCCCGAGGCGCTGCCGGGCAACCTCTCGCTTGCCAAC GGCATGACTTACAAGGAGACGCTGCTGGACTGTGCGAGCTGCCACAAGACCACCGACCCGCACGTCCAGGTCTTCGGAAA CGACTGCGCGACATGCCACGGCACGACCACATGGTCGATTGCCGAGTACCGGCATCCACCGCCGAGTTCCACCGAGTGCG GCCAGTGCCACCTCGCGCCGCTCAGCCACTACAAGGAGCACTTCGGAATGATGTCCAAGCCGATAGCGGGTGTCAGGAAT GCGGAACCTGAGCAGTGCTATCTCTGCCACCAGACCACCTCATGGAACGATATTCGGGGAATAGGCATCTATGACCACCA TTGA
Upstream 100 bases:
>100_bases ACGCCTGGCTGTCGGCACACATCGCGTTCTCGATCATCTTCTATCTTCTGCTGGCGTTGCATATCTGGGCTGGCATCTAC TTCGGGTTGCGGTGGTTCAG
Downstream 100 bases:
>100_bases CGGGTGTTTCTATGAACCTTGAGGCACCTCATGCAGCGATTGAGATCGCGGTGATCGGGTTCGAGATTGCAGGGGTGCTC GCTATAACTTTCGGAAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSRKGKILAALLAVLAPVSAVALWTYLPQMQRAATWQNMASPGPLSSAHAFLKEDCAACHTPVKGVEDATCVACHANETV LVQRQPTAFHADIAGSNNCVACHKEHDAGRSLRGMDHAALTDIIVRWLDRAPEGHEGAVLLAHLKAHRPEALPGNLSLAN GMTYKETLLDCASCHKTTDPHVQVFGNDCATCHGTTTWSIAEYRHPPPSSTECGQCHLAPLSHYKEHFGMMSKPIAGVRN AEPEQCYLCHQTTSWNDIRGIGIYDHH
Sequences:
>Translated_267_residues MSRKGKILAALLAVLAPVSAVALWTYLPQMQRAATWQNMASPGPLSSAHAFLKEDCAACHTPVKGVEDATCVACHANETV LVQRQPTAFHADIAGSNNCVACHKEHDAGRSLRGMDHAALTDIIVRWLDRAPEGHEGAVLLAHLKAHRPEALPGNLSLAN GMTYKETLLDCASCHKTTDPHVQVFGNDCATCHGTTTWSIAEYRHPPPSSTECGQCHLAPLSHYKEHFGMMSKPIAGVRN AEPEQCYLCHQTTSWNDIRGIGIYDHH >Mature_266_residues SRKGKILAALLAVLAPVSAVALWTYLPQMQRAATWQNMASPGPLSSAHAFLKEDCAACHTPVKGVEDATCVACHANETVL VQRQPTAFHADIAGSNNCVACHKEHDAGRSLRGMDHAALTDIIVRWLDRAPEGHEGAVLLAHLKAHRPEALPGNLSLANG MTYKETLLDCASCHKTTDPHVQVFGNDCATCHGTTTWSIAEYRHPPPSSTECGQCHLAPLSHYKEHFGMMSKPIAGVRNA EPEQCYLCHQTTSWNDIRGIGIYDHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29008; Mature: 28877
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKGKILAALLAVLAPVSAVALWTYLPQMQRAATWQNMASPGPLSSAHAFLKEDCAACH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC TPVKGVEDATCVACHANETVLVQRQPTAFHADIAGSNNCVACHKEHDAGRSLRGMDHAAL CCCCCCCCCEEEEEECCCEEEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHH TDIIVRWLDRAPEGHEGAVLLAHLKAHRPEALPGNLSLANGMTYKETLLDCASCHKTTDP HHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCC HVQVFGNDCATCHGTTTWSIAEYRHPPPSSTECGQCHLAPLSHYKEHFGMMSKPIAGVRN CEEEECCCCCCCCCCCEEEHHHCCCCCCCCCCCCCEECCHHHHHHHHHCCHHCCCCCCCC AEPEQCYLCHQTTSWNDIRGIGIYDHH CCCCCEEEEECCCCCCCEEECCCCCCC >Mature Secondary Structure SRKGKILAALLAVLAPVSAVALWTYLPQMQRAATWQNMASPGPLSSAHAFLKEDCAACH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC TPVKGVEDATCVACHANETVLVQRQPTAFHADIAGSNNCVACHKEHDAGRSLRGMDHAAL CCCCCCCCCEEEEEECCCEEEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHH TDIIVRWLDRAPEGHEGAVLLAHLKAHRPEALPGNLSLANGMTYKETLLDCASCHKTTDP HHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCC HVQVFGNDCATCHGTTTWSIAEYRHPPPSSTECGQCHLAPLSHYKEHFGMMSKPIAGVRN CEEEECCCCCCCCCCCEEEHHHCCCCCCCCCCCCCEECCHHHHHHHHHCCHHCCCCCCCC AEPEQCYLCHQTTSWNDIRGIGIYDHH CCCCCEEEEECCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA