| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is ykgG [C]
Identifier: 146283657
GI number: 146283657
Start: 3614013
End: 3614684
Strand: Direct
Name: ykgG [C]
Synonym: PST_3339
Alternate gene names: 146283657
Gene position: 3614013-3614684 (Clockwise)
Preceding gene: 146283656
Following gene: 146283658
Centisome position: 79.13
GC content: 65.18
Gene sequence:
>672_bases ATGAGCGCCAAGGCCAATATCCTCGCCAAGCTGAAGAAAAGCCTGGAAGGCACCACGCCGGTGGTCGATGACTACGACGC GTCGCTGGTCACCCAGCCCTGGAGCTACGCGCCGGAACAGCGTATCGCTCGTCTGCGTCAGCTGATGGAAGCGGTGCACA CCGAAATCCACCTGACCACCGACGCCGGTTGGCCCGCCCTGCTCGAGCAGCTGCTGCACGACCGTCAGCTGCCGAGCCTG CTGATCGCCCCGACCACGCCGTACGGCCAGCGCTTCACCGCGCATTGCGCCGGCCGTGAAGGCCTGCCGGCGCTGAAGGC CTACGATCGCCCAGTCGAGGAGTGGAAGGAAGAGCTGTTCAACGACACCCCGGCGAGCCTCACCGGCACCCTCGGCGCCA TCGCCTCCACCGGCAGTCTGATCATGTGGCCGACCCGCGAGGAGCCGCGCCTGATGAGCTTGGTGCCACCGGTGCACTTC GCCATCCTCAAGGCCAGCGAAATCCACGACAACTTCTACGAAATTCAGCAGAAGTTCCAGTGGGCCGCCGGCATGCCAAC CAATGCGCTGCTGGTCTCCGGCCCGTCGAAAACCGCCGACATCGAGCAGGTGCTGGCCTACGGCGCCCACGGCCCAAAGG ATCTGATCCTGCTGATCCTGGAGGACGCATGA
Upstream 100 bases:
>100_bases CGCCATCGAACATCGGCCCCTGGACGCAGAACCACAGCGCACCGAAACCTGCCGCCCGCTCGCTGCACGAGCTGGCTCGC GAGCACCTGGAGGGCAAGCG
Downstream 100 bases:
>100_bases ACGCGGCCGCGCAACTCGAACGCGCGCCTTTGCCAGCCGCATTCCTCCGCGAAGTCGAACACCTGATCCCGGTCGAGCGG CGCTTCGACGACCCACTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSAKANILAKLKKSLEGTTPVVDDYDASLVTQPWSYAPEQRIARLRQLMEAVHTEIHLTTDAGWPALLEQLLHDRQLPSL LIAPTTPYGQRFTAHCAGREGLPALKAYDRPVEEWKEELFNDTPASLTGTLGAIASTGSLIMWPTREEPRLMSLVPPVHF AILKASEIHDNFYEIQQKFQWAAGMPTNALLVSGPSKTADIEQVLAYGAHGPKDLILLILEDA
Sequences:
>Translated_223_residues MSAKANILAKLKKSLEGTTPVVDDYDASLVTQPWSYAPEQRIARLRQLMEAVHTEIHLTTDAGWPALLEQLLHDRQLPSL LIAPTTPYGQRFTAHCAGREGLPALKAYDRPVEEWKEELFNDTPASLTGTLGAIASTGSLIMWPTREEPRLMSLVPPVHF AILKASEIHDNFYEIQQKFQWAAGMPTNALLVSGPSKTADIEQVLAYGAHGPKDLILLILEDA >Mature_222_residues SAKANILAKLKKSLEGTTPVVDDYDASLVTQPWSYAPEQRIARLRQLMEAVHTEIHLTTDAGWPALLEQLLHDRQLPSLL IAPTTPYGQRFTAHCAGREGLPALKAYDRPVEEWKEELFNDTPASLTGTLGAIASTGSLIMWPTREEPRLMSLVPPVHFA ILKASEIHDNFYEIQQKFQWAAGMPTNALLVSGPSKTADIEQVLAYGAHGPKDLILLILEDA
Specific function: Unknown
COG id: COG1556
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lutC/ykgG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003741 - InterPro: IPR002698 [H]
Pfam domain/function: PF02589 DUF162 [H]
EC number: NA
Molecular weight: Translated: 24631; Mature: 24500
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKANILAKLKKSLEGTTPVVDDYDASLVTQPWSYAPEQRIARLRQLMEAVHTEIHLTT CCCHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEE DAGWPALLEQLLHDRQLPSLLIAPTTPYGQRFTAHCAGREGLPALKAYDRPVEEWKEELF CCCCHHHHHHHHHHCCCCCEEEECCCCCCCCEEHHCCCCCCCCHHHHHCCCHHHHHHHHH NDTPASLTGTLGAIASTGSLIMWPTREEPRLMSLVPPVHFAILKASEIHDNFYEIQQKFQ CCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH WAAGMPTNALLVSGPSKTADIEQVLAYGAHGPKDLILLILEDA HHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECC >Mature Secondary Structure SAKANILAKLKKSLEGTTPVVDDYDASLVTQPWSYAPEQRIARLRQLMEAVHTEIHLTT CCHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEE DAGWPALLEQLLHDRQLPSLLIAPTTPYGQRFTAHCAGREGLPALKAYDRPVEEWKEELF CCCCHHHHHHHHHHCCCCCEEEECCCCCCCCEEHHCCCCCCCCHHHHHCCCHHHHHHHHH NDTPASLTGTLGAIASTGSLIMWPTREEPRLMSLVPPVHFAILKASEIHDNFYEIQQKFQ CCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH WAAGMPTNALLVSGPSKTADIEQVLAYGAHGPKDLILLILEDA HHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]