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The map label for this gene is omlA [H]

Identifier: 146283649

GI number: 146283649

Start: 3606599

End: 3607204

Strand: Direct

Name: omlA [H]

Synonym: PST_3331

Alternate gene names: 146283649

Gene position: 3606599-3607204 (Clockwise)

Preceding gene: 146283647

Following gene: 146283652

Centisome position: 78.96

GC content: 60.4

Gene sequence:

>606_bases
TTGGCTTTCTCGCTGCTGCTGTTTCGCAGCCTCCTTCAATACGGGTATGATCCGGGTTCTTTGCCCAGCCAAGATAGTGG
AAGTCACCCACCGATGCAAAACACCAAGCTCATGCTGGCCAGCCTCACCCTCGTGGGTCTGTTCGCACTCGCCGGTTGTT
CATTTCCCGGGGTTTACAAGGTCGACATTCAACAGGGCAATGTCGTCACGCAGGACATGATAGACCAGTTGCGGCCTGGA
ATGACCCGCCAGCAGGTGCGGTTTATCATGGGCAACCCGCTGATCACCGACACTTTCCACCCCAACCGCTGGGATTATCT
GTACAGCATTCAGCCCGGCGGCAGTCAGCGCCAGCAGGAGCGCGTGAGCCTGGTATTCAATGCCAACGACCAGCTGGCCG
GCCTGGCAGGCGATTTCATGCCTGGCGTCAGCCGTGACGAACAGATCCTCGGTCGCCAAACCCAGGCGCCGAGCGCGCCC
GCAGCCACGCCCCGCCAACCAGAAGAGCGCCCGGCGCCCGGATCACTGCTGGAGCAGATTCAGCGCGAAGTGGACGAAGC
GGAAGCCGTTCCGGTACCGATTCCAGAACCACTGGAAACCGAATGA

Upstream 100 bases:

>100_bases
ATGTGTCGACGGTCAGTCGTATCCAGCATCTGCAGGATCTTGACCCGCGGCAGCGTTACCTTGAGACCTGCTTTACGTAG
TTCGCTATTTTCAACCATGG

Downstream 100 bases:

>100_bases
AAAAACGCCCGGCGAGTCCGGGCGTTTTGCTATCTAGCGTTCAAGCATCCTCTGCCTTGTTCTTCGCCGCTTTCGCCGCA
CGCTGCTTGCGGACTTCCTT

Product: outer membrane lipoprotein OmlA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MAFSLLLFRSLLQYGYDPGSLPSQDSGSHPPMQNTKLMLASLTLVGLFALAGCSFPGVYKVDIQQGNVVTQDMIDQLRPG
MTRQQVRFIMGNPLITDTFHPNRWDYLYSIQPGGSQRQQERVSLVFNANDQLAGLAGDFMPGVSRDEQILGRQTQAPSAP
AATPRQPEERPAPGSLLEQIQREVDEAEAVPVPIPEPLETE

Sequences:

>Translated_201_residues
MAFSLLLFRSLLQYGYDPGSLPSQDSGSHPPMQNTKLMLASLTLVGLFALAGCSFPGVYKVDIQQGNVVTQDMIDQLRPG
MTRQQVRFIMGNPLITDTFHPNRWDYLYSIQPGGSQRQQERVSLVFNANDQLAGLAGDFMPGVSRDEQILGRQTQAPSAP
AATPRQPEERPAPGSLLEQIQREVDEAEAVPVPIPEPLETE
>Mature_200_residues
AFSLLLFRSLLQYGYDPGSLPSQDSGSHPPMQNTKLMLASLTLVGLFALAGCSFPGVYKVDIQQGNVVTQDMIDQLRPGM
TRQQVRFIMGNPLITDTFHPNRWDYLYSIQPGGSQRQQERVSLVFNANDQLAGLAGDFMPGVSRDEQILGRQTQAPSAPA
ATPRQPEERPAPGSLLEQIQREVDEAEAVPVPIPEPLETE

Specific function: May have a structural role in maintaining the cell envelope integrity [H]

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

Organism=Escherichia coli, GI87082138, Length=108, Percent_Identity=37.962962962963, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 22121; Mature: 21990

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFSLLLFRSLLQYGYDPGSLPSQDSGSHPPMQNTKLMLASLTLVGLFALAGCSFPGVYK
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE
VDIQQGNVVTQDMIDQLRPGMTRQQVRFIMGNPLITDTFHPNRWDYLYSIQPGGSQRQQE
EEECCCCEEHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCCCCCEEEEECCCCCHHHHH
RVSLVFNANDQLAGLAGDFMPGVSRDEQILGRQTQAPSAPAATPRQPEERPAPGSLLEQI
HEEEEECCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
QREVDEAEAVPVPIPEPLETE
HHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AFSLLLFRSLLQYGYDPGSLPSQDSGSHPPMQNTKLMLASLTLVGLFALAGCSFPGVYK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE
VDIQQGNVVTQDMIDQLRPGMTRQQVRFIMGNPLITDTFHPNRWDYLYSIQPGGSQRQQE
EEECCCCEEHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCCCCCEEEEECCCCCHHHHH
RVSLVFNANDQLAGLAGDFMPGVSRDEQILGRQTQAPSAPAATPRQPEERPAPGSLLEQI
HEEEEECCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
QREVDEAEAVPVPIPEPLETE
HHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9973334 [H]