Click here to switch to the map view.

The map label for this gene is recN [H]

Identifier: 146283647

GI number: 146283647

Start: 3604456

End: 3606129

Strand: Direct

Name: recN [H]

Synonym: PST_3329

Alternate gene names: 146283647

Gene position: 3604456-3606129 (Clockwise)

Preceding gene: 146283638

Following gene: 146283649

Centisome position: 78.92

GC content: 66.61

Gene sequence:

>1674_bases
ATGCTGGTTCATCTGTCGGTTCACAACTACGCCATCGTCGAACACCTGGACCTCGAGCTGAAACGCGGCATGAGCGTGAT
CAGCGGTGAAACCGGCGCGGGCAAATCGATCATGCTCGATGCCCTCGGCCTGACCCTCGGCGACCGGGCCGACAGCAGCG
TGGTGCGCATCGGTGCGGACAAGGCCGACATCCTCGCCAGCTTCGACCTGGACGACATCCCCGACGCCCGCGCCTGGCTG
GCCGAACGCGACATAGACAGCGAAGGCCCCTGCATCCTGCGCCGAGTGATCACCGCCGAGGGCCGCTCGCGCGGCTACAT
CAATGGCACACCCTGCCCGCAGGGTGACCTCAAGGCGCTGGGCGAACTGCTGATCGACATTCACAGCCAGCACGAGCACC
AGTCGCTGCTCAAGACCGACACCCACCGGCGCCTGCTCGACGAGTACAGCGGCAGCCAGGACCTGGCGCGCCAGGTGCAA
CTGGCCGCGCAGCGCTGGCGGCAGACGCGCCAGACCCTGGAACGGCTGAGCAACAGCAGCGACGAGCAGCGCGCACGCCA
CCAGCTGCTCAGCTATCAGCTGGAAGAGCTGGAGAATCTCGCGCTCGGCGAGCACGAACTGGAGCAGCTCGAACAGGAAC
ACAAGAACCTGGCCAACGCCGAGCAGCTGCTCGGCGCCTGCCGCCAGGTCATGGAGCTGAGCAGCGAGAGTGATGCCGGC
AACGTGCTTTCCGCCCTGACCAGCAGCCTGCAGCGGCTGACCGCCTTCCAGAATCAGCCGCAGGCGCTGAGCGAAGCGGT
CAACCTGCTCGCCAGCGCGCAAATCCAGGTCGAAGAGGCGATCGGTGAGCTCAATCGCTTCGTCGACCATTTCGACGCCG
ATCCGGAACGCCAGCAGATGCTGGAGGAGCGCCTGGACACCATCTACACCCTGGCGCGCAAGCACCGCGTACAACCGAGC
GAACTGCCCAACCTGCACCAGCAGCTGCTGGAAGAACTGGAAGGCCTCAATGCCGATGACGAAGCGGTCGAGCGCCTCGG
CGAAGAGCTGGCCGCCTACGCTCGCCACTACGAGGAGAAAGCCGGTGAACTGAGCCGCAACCGTCAGGCTGCCGCCGAAC
AACTGGCGAGCGCGGTCGAGGCAGAAATCCAGCGCCTGGGCATGCCCGGCGGGCGCTTCAGCGTACAGCTCAAGCCGGCA
GCAGAAGGCGAGTACACGCCCTACGGCCTGGAACAGGTGGAGTTCCTGGTCAGCGCCAACCCTGGCCAGCCACTGCGCCC
GCTGGCCAAGGTCGCGTCGGGCGGCGAGCTGTCACGGATCAGCCTGGCGATCCAGGTGATCACGGCACAAACCTCGCGCG
TGCCGACGCTGGTGTTCGACGAAGTCGATGTCGGCATCGGCGGCCCCACTGCGGAAATCGTCGGCCAGCTCCTGCGCCGC
CTCGGCGAACGCGGCCAGGTCCTGACCGTCACGCACCTGCCGCAGGTGGCTGCGCAAGGACACCACCACCTGTTCGTGCA
CAAGGCCCGCGGTACCGACGAAACCCGCACGGCGGTTACCGAACTGGACCAGGCGGGGCGCGTCGAGGAGATCGCCCGGA
TGCTCGGCGGCGTCGACCTGACCGAACAATCCCTGGCTCATGCCCGGCAGATGGTCACCTCCGCACAGCCCTGA

Upstream 100 bases:

>100_bases
GGCGAAATGACGAGCGACCGCACATTCATCCTTCTGCGCTTGTGGGCAGCAGGAAAACCACTGTATAAATAGCCAGCCAC
GCAAAATCGGGAGCCTTGCC

Downstream 100 bases:

>100_bases
ACGCCAGGCAAAGCGGCATAAAAAAGGCGGCCCATGGCCGCCTTTTCAACATCTATTGAGGATCAGTCCTTCTTGCGCAC
GTAGAGCACCAGGTTGTGAT

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MLVHLSVHNYAIVEHLDLELKRGMSVISGETGAGKSIMLDALGLTLGDRADSSVVRIGADKADILASFDLDDIPDARAWL
AERDIDSEGPCILRRVITAEGRSRGYINGTPCPQGDLKALGELLIDIHSQHEHQSLLKTDTHRRLLDEYSGSQDLARQVQ
LAAQRWRQTRQTLERLSNSSDEQRARHQLLSYQLEELENLALGEHELEQLEQEHKNLANAEQLLGACRQVMELSSESDAG
NVLSALTSSLQRLTAFQNQPQALSEAVNLLASAQIQVEEAIGELNRFVDHFDADPERQQMLEERLDTIYTLARKHRVQPS
ELPNLHQQLLEELEGLNADDEAVERLGEELAAYARHYEEKAGELSRNRQAAAEQLASAVEAEIQRLGMPGGRFSVQLKPA
AEGEYTPYGLEQVEFLVSANPGQPLRPLAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR
LGERGQVLTVTHLPQVAAQGHHHLFVHKARGTDETRTAVTELDQAGRVEEIARMLGGVDLTEQSLAHARQMVTSAQP

Sequences:

>Translated_557_residues
MLVHLSVHNYAIVEHLDLELKRGMSVISGETGAGKSIMLDALGLTLGDRADSSVVRIGADKADILASFDLDDIPDARAWL
AERDIDSEGPCILRRVITAEGRSRGYINGTPCPQGDLKALGELLIDIHSQHEHQSLLKTDTHRRLLDEYSGSQDLARQVQ
LAAQRWRQTRQTLERLSNSSDEQRARHQLLSYQLEELENLALGEHELEQLEQEHKNLANAEQLLGACRQVMELSSESDAG
NVLSALTSSLQRLTAFQNQPQALSEAVNLLASAQIQVEEAIGELNRFVDHFDADPERQQMLEERLDTIYTLARKHRVQPS
ELPNLHQQLLEELEGLNADDEAVERLGEELAAYARHYEEKAGELSRNRQAAAEQLASAVEAEIQRLGMPGGRFSVQLKPA
AEGEYTPYGLEQVEFLVSANPGQPLRPLAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR
LGERGQVLTVTHLPQVAAQGHHHLFVHKARGTDETRTAVTELDQAGRVEEIARMLGGVDLTEQSLAHARQMVTSAQP
>Mature_557_residues
MLVHLSVHNYAIVEHLDLELKRGMSVISGETGAGKSIMLDALGLTLGDRADSSVVRIGADKADILASFDLDDIPDARAWL
AERDIDSEGPCILRRVITAEGRSRGYINGTPCPQGDLKALGELLIDIHSQHEHQSLLKTDTHRRLLDEYSGSQDLARQVQ
LAAQRWRQTRQTLERLSNSSDEQRARHQLLSYQLEELENLALGEHELEQLEQEHKNLANAEQLLGACRQVMELSSESDAG
NVLSALTSSLQRLTAFQNQPQALSEAVNLLASAQIQVEEAIGELNRFVDHFDADPERQQMLEERLDTIYTLARKHRVQPS
ELPNLHQQLLEELEGLNADDEAVERLGEELAAYARHYEEKAGELSRNRQAAAEQLASAVEAEIQRLGMPGGRFSVQLKPA
AEGEYTPYGLEQVEFLVSANPGQPLRPLAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR
LGERGQVLTVTHLPQVAAQGHHHLFVHKARGTDETRTAVTELDQAGRVEEIARMLGGVDLTEQSLAHARQMVTSAQP

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=554, Percent_Identity=44.043321299639, Blast_Score=451, Evalue=1e-128,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61359; Mature: 61359

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00422 GRANINS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVHLSVHNYAIVEHLDLELKRGMSVISGETGAGKSIMLDALGLTLGDRADSSVVRIGAD
CEEEEEECCCHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHCCHHCCCCCCCEEEECCC
KADILASFDLDDIPDARAWLAERDIDSEGPCILRRVITAEGRSRGYINGTPCPQGDLKAL
HHHHHEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
GELLIDIHSQHEHQSLLKTDTHRRLLDEYSGSQDLARQVQLAAQRWRQTRQTLERLSNSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DEQRARHQLLSYQLEELENLALGEHELEQLEQEHKNLANAEQLLGACRQVMELSSESDAG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHH
NVLSALTSSLQRLTAFQNQPQALSEAVNLLASAQIQVEEAIGELNRFVDHFDADPERQQM
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LEERLDTIYTLARKHRVQPSELPNLHQQLLEELEGLNADDEAVERLGEELAAYARHYEEK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
AGELSRNRQAAAEQLASAVEAEIQRLGMPGGRFSVQLKPAAEGEYTPYGLEQVEFLVSAN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCC
PGQPLRPLAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
LGERGQVLTVTHLPQVAAQGHHHLFVHKARGTDETRTAVTELDQAGRVEEIARMLGGVDL
HCCCCCEEEEECCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCC
TEQSLAHARQMVTSAQP
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLVHLSVHNYAIVEHLDLELKRGMSVISGETGAGKSIMLDALGLTLGDRADSSVVRIGAD
CEEEEEECCCHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHCCHHCCCCCCCEEEECCC
KADILASFDLDDIPDARAWLAERDIDSEGPCILRRVITAEGRSRGYINGTPCPQGDLKAL
HHHHHEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
GELLIDIHSQHEHQSLLKTDTHRRLLDEYSGSQDLARQVQLAAQRWRQTRQTLERLSNSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DEQRARHQLLSYQLEELENLALGEHELEQLEQEHKNLANAEQLLGACRQVMELSSESDAG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHH
NVLSALTSSLQRLTAFQNQPQALSEAVNLLASAQIQVEEAIGELNRFVDHFDADPERQQM
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LEERLDTIYTLARKHRVQPSELPNLHQQLLEELEGLNADDEAVERLGEELAAYARHYEEK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
AGELSRNRQAAAEQLASAVEAEIQRLGMPGGRFSVQLKPAAEGEYTPYGLEQVEFLVSAN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCC
PGQPLRPLAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
LGERGQVLTVTHLPQVAAQGHHHLFVHKARGTDETRTAVTELDQAGRVEEIARMLGGVDL
HCCCCCEEEEECCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCC
TEQSLAHARQMVTSAQP
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA