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The map label for this gene is yhbY [C]

Identifier: 146283638

GI number: 146283638

Start: 3593684

End: 3593995

Strand: Direct

Name: yhbY [C]

Synonym: PST_3320

Alternate gene names: 146283638

Gene position: 3593684-3593995 (Clockwise)

Preceding gene: 146283624

Following gene: 146283647

Centisome position: 78.68

GC content: 56.09

Gene sequence:

>312_bases
ATGCCGCTCACCAACGAGCAGAAGAAACAGTACAAGTCCATCGGCCATCATCTGAAACCGGTGCTGATCGTTGCCGAAAA
CGGGCTGACCGAAGGCGTTCAAGCCGAACTGGAGCGAGCCCTGAACGATCACGAACTGATCAAGATCCAGTTCCGCCTTA
CCGAGCGCGAAGATCGCCGCGCCCTGATGGAAGAGCTGTGCGCAATCGGAAAATGCGAACTGGTGCAGACCATCGGCAAA
ATGGCGCTGGTCTATCGCAGGAATCCGAAGCCGAACAAACAGCTGTCGAACATCCATCGCTTCCAGGCGTGA

Upstream 100 bases:

>100_bases
GCTCTAAAGCCTGCCAAACCGATCGCTCACCTGTGCGGCCTTGCACCTCTCGGTTACACTAGCCGCCGTTTTTCAAGGGT
TCTGACGCAAGGGTCGAAAT

Downstream 100 bases:

>100_bases
AACCGCTGCGGCAGCAGTCTGCCGCCGTCAGTCATTGCTCTCGCCCGGAACGGGCTGCAATACCAGCATCAAACCGCCCA
GCGCCATCGCCAGAACACTG

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MPLTNEQKKQYKSIGHHLKPVLIVAENGLTEGVQAELERALNDHELIKIQFRLTEREDRRALMEELCAIGKCELVQTIGK
MALVYRRNPKPNKQLSNIHRFQA

Sequences:

>Translated_103_residues
MPLTNEQKKQYKSIGHHLKPVLIVAENGLTEGVQAELERALNDHELIKIQFRLTEREDRRALMEELCAIGKCELVQTIGK
MALVYRRNPKPNKQLSNIHRFQA
>Mature_102_residues
PLTNEQKKQYKSIGHHLKPVLIVAENGLTEGVQAELERALNDHELIKIQFRLTEREDRRALMEELCAIGKCELVQTIGKM
ALVYRRNPKPNKQLSNIHRFQA

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=97, Percent_Identity=42.2680412371134, Blast_Score=74, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 11931; Mature: 11800

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS01301 UPF0044

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTNEQKKQYKSIGHHLKPVLIVAENGLTEGVQAELERALNDHELIKIQFRLTEREDRR
CCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEEECCCHHHH
ALMEELCAIGKCELVQTIGKMALVYRRNPKPNKQLSNIHRFQA
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
PLTNEQKKQYKSIGHHLKPVLIVAENGLTEGVQAELERALNDHELIKIQFRLTEREDRR
CCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEEECCCHHHH
ALMEELCAIGKCELVQTIGKMALVYRRNPKPNKQLSNIHRFQA
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]