| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is prsA [H]
Identifier: 146283514
GI number: 146283514
Start: 3434381
End: 3435310
Strand: Direct
Name: prsA [H]
Synonym: PST_3189
Alternate gene names: 146283514
Gene position: 3434381-3435310 (Clockwise)
Preceding gene: 146283513
Following gene: 146283515
Centisome position: 75.19
GC content: 60.22
Gene sequence:
>930_bases ATGGTCTTCACGGGGAACGCCAACCCCGACCTGGCCCGGCGTGTCGTACGTCAGCTGCATATCCCCCTCGGTGATGCCTA CGTCGGAAAATTCTCCGACGGCGAAATCAGTGTCGAGATCAACGAGAACGTTCGTGGTAAGGACGTCTTTCTGATTCAAC CGACCTGCGCTCCGACCAACGACAACCTGATGGAACTGGTAGTGCTGGCTGACGCCTTCCGCCGCTCCTCGGCGTCGCGA ATCACCGCTGTGATCCCCTACTTCGGTTATGCCCGCCAGGATCGTCGCCCGCGCTCTGCTCGTGTGCCGATCAGCGCCAA GGTCGTGGCCGACATGCTCGACGTCGTGGGCGTCAACCGTGTTCTGACCGTCGACCTGCACGCCGACCAGATCCAGGGTT TCTTCGACATGCCGGTGGACAACATCTACGGCTCGCCGGTACTGGTCGACGACATCCAGGCTCAGCGCTTCGACAACCTG ATGATCGTCTCCCCCGATATCGGCGGCGTAGTTCGAGCCCGTGCCGTAGCCAAGTCCCTTGGCGTCGACCTGGCGATCAT CGACAAGCGTCGACCAAAGGCCAACCAGTCGGAAGTGATGCACATCATCGGTGACATCGATAGCCGTACCTGCATCCTCG TCGACGACATGGTCGATACCGCCGGTACCCTGTGTCACGCAGCCAAGGCACTGAAAGATCATGGCGCTGCCAAGGTCTAC GCCTACTGCACACACCCGATCCTGTCCGGTCGTGCCATCGAGAATATCGAGGGTTCAGTGCTCGACGAGCTGGTGGTGAC CAACACCATTCCGCTGTCGGCTGCTGCACAGTCCTGTACCCGAATTCGCCAACTGGACATCGCGCCAGTGGTGGCTGAAG CGGTTCGCCGCATCAGCAATGCCGAATCGATCAGTGCGATGTTCCGCTAA
Upstream 100 bases:
>100_bases GCCCCTGCCATACACTTGAAGCTGTTCAAGAGCTTGCCTTTTGAACAGCTTTTTATTCATCGGACCCACCCTCAGGCAGG TACTGCGCGTGTCCAAGATG
Downstream 100 bases:
>100_bases GCGAAAGCTACGCAAATCGCACTGAACGTAATGTGCCCCGCCTCGTGCGGGGCTTTTTGCCCAACAGCCCGAGCGCTGGT CGCAAGCGCGACAGGTAATG
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MVFTGNANPDLARRVVRQLHIPLGDAYVGKFSDGEISVEINENVRGKDVFLIQPTCAPTNDNLMELVVLADAFRRSSASR ITAVIPYFGYARQDRRPRSARVPISAKVVADMLDVVGVNRVLTVDLHADQIQGFFDMPVDNIYGSPVLVDDIQAQRFDNL MIVSPDIGGVVRARAVAKSLGVDLAIIDKRRPKANQSEVMHIIGDIDSRTCILVDDMVDTAGTLCHAAKALKDHGAAKVY AYCTHPILSGRAIENIEGSVLDELVVTNTIPLSAAAQSCTRIRQLDIAPVVAEAVRRISNAESISAMFR
Sequences:
>Translated_309_residues MVFTGNANPDLARRVVRQLHIPLGDAYVGKFSDGEISVEINENVRGKDVFLIQPTCAPTNDNLMELVVLADAFRRSSASR ITAVIPYFGYARQDRRPRSARVPISAKVVADMLDVVGVNRVLTVDLHADQIQGFFDMPVDNIYGSPVLVDDIQAQRFDNL MIVSPDIGGVVRARAVAKSLGVDLAIIDKRRPKANQSEVMHIIGDIDSRTCILVDDMVDTAGTLCHAAKALKDHGAAKVY AYCTHPILSGRAIENIEGSVLDELVVTNTIPLSAAAQSCTRIRQLDIAPVVAEAVRRISNAESISAMFR >Mature_309_residues MVFTGNANPDLARRVVRQLHIPLGDAYVGKFSDGEISVEINENVRGKDVFLIQPTCAPTNDNLMELVVLADAFRRSSASR ITAVIPYFGYARQDRRPRSARVPISAKVVADMLDVVGVNRVLTVDLHADQIQGFFDMPVDNIYGSPVLVDDIQAQRFDNL MIVSPDIGGVVRARAVAKSLGVDLAIIDKRRPKANQSEVMHIIGDIDSRTCILVDDMVDTAGTLCHAAKALKDHGAAKVY AYCTHPILSGRAIENIEGSVLDELVVTNTIPLSAAAQSCTRIRQLDIAPVVAEAVRRISNAESISAMFR
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506129, Length=310, Percent_Identity=49.6774193548387, Blast_Score=313, Evalue=1e-85, Organism=Homo sapiens, GI84875539, Length=312, Percent_Identity=49.0384615384615, Blast_Score=311, Evalue=3e-85, Organism=Homo sapiens, GI4506127, Length=309, Percent_Identity=48.5436893203884, Blast_Score=308, Evalue=6e-84, Organism=Homo sapiens, GI28557709, Length=309, Percent_Identity=47.2491909385113, Blast_Score=300, Evalue=9e-82, Organism=Homo sapiens, GI194018537, Length=343, Percent_Identity=35.8600583090379, Blast_Score=197, Evalue=8e-51, Organism=Homo sapiens, GI4506133, Length=345, Percent_Identity=34.4927536231884, Blast_Score=190, Evalue=1e-48, Organism=Homo sapiens, GI310128524, Length=149, Percent_Identity=32.8859060402685, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI310115209, Length=149, Percent_Identity=32.8859060402685, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI310118259, Length=149, Percent_Identity=32.8859060402685, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI310119946, Length=149, Percent_Identity=32.8859060402685, Blast_Score=87, Evalue=1e-17, Organism=Escherichia coli, GI1787458, Length=308, Percent_Identity=67.8571428571429, Blast_Score=434, Evalue=1e-123, Organism=Caenorhabditis elegans, GI17554704, Length=309, Percent_Identity=46.6019417475728, Blast_Score=301, Evalue=3e-82, Organism=Caenorhabditis elegans, GI25149168, Length=309, Percent_Identity=46.6019417475728, Blast_Score=300, Evalue=4e-82, Organism=Caenorhabditis elegans, GI17554702, Length=309, Percent_Identity=46.6019417475728, Blast_Score=300, Evalue=6e-82, Organism=Caenorhabditis elegans, GI71989924, Length=309, Percent_Identity=46.6019417475728, Blast_Score=298, Evalue=2e-81, Organism=Caenorhabditis elegans, GI17570245, Length=338, Percent_Identity=34.3195266272189, Blast_Score=201, Evalue=5e-52, Organism=Saccharomyces cerevisiae, GI6319403, Length=311, Percent_Identity=45.6591639871383, Blast_Score=273, Evalue=2e-74, Organism=Saccharomyces cerevisiae, GI6320946, Length=310, Percent_Identity=44.5161290322581, Blast_Score=268, Evalue=7e-73, Organism=Saccharomyces cerevisiae, GI6321776, Length=301, Percent_Identity=45.514950166113, Blast_Score=265, Evalue=8e-72, Organism=Saccharomyces cerevisiae, GI6322667, Length=196, Percent_Identity=41.3265306122449, Blast_Score=152, Evalue=6e-38, Organism=Saccharomyces cerevisiae, GI6324511, Length=114, Percent_Identity=42.9824561403509, Blast_Score=103, Evalue=4e-23, Organism=Drosophila melanogaster, GI21355239, Length=309, Percent_Identity=49.5145631067961, Blast_Score=301, Evalue=3e-82, Organism=Drosophila melanogaster, GI45551540, Length=331, Percent_Identity=46.2235649546828, Blast_Score=292, Evalue=2e-79, Organism=Drosophila melanogaster, GI24651458, Length=354, Percent_Identity=35.0282485875706, Blast_Score=211, Evalue=6e-55, Organism=Drosophila melanogaster, GI24651456, Length=354, Percent_Identity=35.0282485875706, Blast_Score=211, Evalue=6e-55, Organism=Drosophila melanogaster, GI281362873, Length=354, Percent_Identity=35.0282485875706, Blast_Score=211, Evalue=6e-55, Organism=Drosophila melanogaster, GI24651454, Length=354, Percent_Identity=35.0282485875706, Blast_Score=211, Evalue=6e-55, Organism=Drosophila melanogaster, GI24651462, Length=201, Percent_Identity=37.8109452736318, Blast_Score=136, Evalue=2e-32, Organism=Drosophila melanogaster, GI24651464, Length=201, Percent_Identity=37.8109452736318, Blast_Score=136, Evalue=2e-32, Organism=Drosophila melanogaster, GI45552010, Length=201, Percent_Identity=37.8109452736318, Blast_Score=136, Evalue=2e-32,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 33617; Mature: 33617
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFTGNANPDLARRVVRQLHIPLGDAYVGKFSDGEISVEINENVRGKDVFLIQPTCAPTN CEECCCCCHHHHHHHHHHHCCCCCCCEECCCCCCEEEEEECCCCCCCEEEEECCCCCCCC DNLMELVVLADAFRRSSASRITAVIPYFGYARQDRRPRSARVPISAKVVADMLDVVGVNR CCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCE VLTVDLHADQIQGFFDMPVDNIYGSPVLVDDIQAQRFDNLMIVSPDIGGVVRARAVAKSL EEEEEEEHHHHCCCCCCCHHHHCCCCEEEECHHHHHCCCEEEECCCCCHHHHHHHHHHHH GVDLAIIDKRRPKANQSEVMHIIGDIDSRTCILVDDMVDTAGTLCHAAKALKDHGAAKVY CCCEEEEECCCCCCCHHHHHHHEECCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEE AYCTHPILSGRAIENIEGSVLDELVVTNTIPLSAAAQSCTRIRQLDIAPVVAEAVRRISN EEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCC AESISAMFR HHHHHHHCC >Mature Secondary Structure MVFTGNANPDLARRVVRQLHIPLGDAYVGKFSDGEISVEINENVRGKDVFLIQPTCAPTN CEECCCCCHHHHHHHHHHHCCCCCCCEECCCCCCEEEEEECCCCCCCEEEEECCCCCCCC DNLMELVVLADAFRRSSASRITAVIPYFGYARQDRRPRSARVPISAKVVADMLDVVGVNR CCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCE VLTVDLHADQIQGFFDMPVDNIYGSPVLVDDIQAQRFDNLMIVSPDIGGVVRARAVAKSL EEEEEEEHHHHCCCCCCCHHHHCCCCEEEECHHHHHCCCEEEECCCCCHHHHHHHHHHHH GVDLAIIDKRRPKANQSEVMHIIGDIDSRTCILVDDMVDTAGTLCHAAKALKDHGAAKVY CCCEEEEECCCCCCCHHHHHHHEECCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEE AYCTHPILSGRAIENIEGSVLDELVVTNTIPLSAAAQSCTRIRQLDIAPVVAEAVRRISN EEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCC AESISAMFR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]