| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
Click here to switch to the map view.
The map label for this gene is 146283466
Identifier: 146283466
GI number: 146283466
Start: 3379099
End: 3380175
Strand: Direct
Name: 146283466
Synonym: PST_3139
Alternate gene names: NA
Gene position: 3379099-3380175 (Clockwise)
Preceding gene: 146283465
Following gene: 146283467
Centisome position: 73.98
GC content: 67.6
Gene sequence:
>1077_bases ATGATTCGTTCCAACACCCTGCGCATGGCCAGCGGCGGTCTGTTGACCGCCCTGCTGCTGAGCGCCTGCACGCCTGCCGA TCCGCAGGCCGAAACCAGCAAGGCGCTGACCGATGGCGTCCTGCTGCCCGCCTACACCCACTGGGCCGAAACCGACCGTC GCCTGGCGGCCAGCGCCATAGCCTACTGCGCCGACAACCAGACCCTCGAAGAGGCGCGCGAAGCCTTCGTCCATGCGCAG ACGGCCTGGGCCGGCCTGCAACCCTTGCTGATAGGCCCGATGGGCGAAGGCAACCTGGCCTGGCAGGTGCAGTTCTGGCC GGACAAGAAAAACCTGGTCGCGCGTCAGGTCACGGCCCTGCTCGGGGCCAAGCCCAACCTCACGCAGGCCGATCTGGACG GTGCTAGCGTCGTGGTACAGGGCCTCAGCGCCTACGAGTACGTTCTCTTCGACAAGACGATCGATCTCGGCGACAGCGCA ACCAAGGCCCGCTACTGCCCGCTGCTGACATCCATCGGTGAACACCAGCAGCAGCTTGCCGCCGGCGTGCTGCAGCAGTG GGAAGACAAGGACGGCATGGCCGACCAGCTGCGCAGCTTCCCCAATGAGCGCTATGCCGAGCCAAGCGAGGCGATCGCCG AGCTGCTGCGAGTCCAGGTCACCGCCCTCGACGGCCTGAAGAAGAAGCTCGGCGCCCCGCTGGGTCGACAGACCAAGGGC CATCCGCAGCCTTACCAGGCCGAGGGCTGGCGCAGCGACACCACGCTGGCCAGCATCGCCGCAGCGGTCAAGGGTGCCGA AAGCCTCTGGCTAGGCGCGGACAACAACGGCCTGCGTTCGCTACTGCCTGCCGAGCAGGCGGACCTGGCCCAGCGCATCG ACGCCGCTTACGCCCAGCTGCTGCAGCACCGGGGCGGGCTGACGCAACCATTCGGCGCGCAGCTGGAAGACGAACAGGGC CGCAGCGAACTGGATGCGCTCTACCAGGGCCTCGACCGTCTGCATCGCCTGCACCAGCAGGAGCTGGCCCGCGCCCTCGG CGTGCAGATCGGCTTCAACGCTCACGACGGGGACTGA
Upstream 100 bases:
>100_bases ACGCACTGCTGAGCTTCCTCGAGTCGCTCTGAGTGAACACATGTATCCATGCTTTCCCGGCGCGAGAGCGCTGCAAACCG GCAATGCCGACGAGGACACC
Downstream 100 bases:
>100_bases GATGAAACGTCGAACCCTGCTCGGTCTGGGTGGCGCCGTGCTCGCGGCAAGTGGTATCGCGGGCTGGAGCCTGAGCCGTC ATGGCGGGCGGCCGGTGCTG
Product: putative lipoprotein
Products: NA
Alternate protein names: Periplasmic Lipoprotein; Periplasmic Lipoprotein-Like Protein; Imelysin Superfamily Protein; Signal Peptide Protein; Exported Protein; Peptidase; Iron-Regulated Protein A; Imelysin Family
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MIRSNTLRMASGGLLTALLLSACTPADPQAETSKALTDGVLLPAYTHWAETDRRLAASAIAYCADNQTLEEAREAFVHAQ TAWAGLQPLLIGPMGEGNLAWQVQFWPDKKNLVARQVTALLGAKPNLTQADLDGASVVVQGLSAYEYVLFDKTIDLGDSA TKARYCPLLTSIGEHQQQLAAGVLQQWEDKDGMADQLRSFPNERYAEPSEAIAELLRVQVTALDGLKKKLGAPLGRQTKG HPQPYQAEGWRSDTTLASIAAAVKGAESLWLGADNNGLRSLLPAEQADLAQRIDAAYAQLLQHRGGLTQPFGAQLEDEQG RSELDALYQGLDRLHRLHQQELARALGVQIGFNAHDGD
Sequences:
>Translated_358_residues MIRSNTLRMASGGLLTALLLSACTPADPQAETSKALTDGVLLPAYTHWAETDRRLAASAIAYCADNQTLEEAREAFVHAQ TAWAGLQPLLIGPMGEGNLAWQVQFWPDKKNLVARQVTALLGAKPNLTQADLDGASVVVQGLSAYEYVLFDKTIDLGDSA TKARYCPLLTSIGEHQQQLAAGVLQQWEDKDGMADQLRSFPNERYAEPSEAIAELLRVQVTALDGLKKKLGAPLGRQTKG HPQPYQAEGWRSDTTLASIAAAVKGAESLWLGADNNGLRSLLPAEQADLAQRIDAAYAQLLQHRGGLTQPFGAQLEDEQG RSELDALYQGLDRLHRLHQQELARALGVQIGFNAHDGD >Mature_358_residues MIRSNTLRMASGGLLTALLLSACTPADPQAETSKALTDGVLLPAYTHWAETDRRLAASAIAYCADNQTLEEAREAFVHAQ TAWAGLQPLLIGPMGEGNLAWQVQFWPDKKNLVARQVTALLGAKPNLTQADLDGASVVVQGLSAYEYVLFDKTIDLGDSA TKARYCPLLTSIGEHQQQLAAGVLQQWEDKDGMADQLRSFPNERYAEPSEAIAELLRVQVTALDGLKKKLGAPLGRQTKG HPQPYQAEGWRSDTTLASIAAAVKGAESLWLGADNNGLRSLLPAEQADLAQRIDAAYAQLLQHRGGLTQPFGAQLEDEQG RSELDALYQGLDRLHRLHQQELARALGVQIGFNAHDGD
Specific function: Unknown
COG id: COG3489
COG function: function code R; Predicted periplasmic lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38751; Mature: 38751
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSNTLRMASGGLLTALLLSACTPADPQAETSKALTDGVLLPAYTHWAETDRRLAASAI CCCCCCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH AYCADNQTLEEAREAFVHAQTAWAGLQPLLIGPMGEGNLAWQVQFWPDKKNLVARQVTAL HHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCHHHHHHHHHHHH LGAKPNLTQADLDGASVVVQGLSAYEYVLFDKTIDLGDSATKARYCPLLTSIGEHQQQLA HCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH AGVLQQWEDKDGMADQLRSFPNERYAEPSEAIAELLRVQVTALDGLKKKLGAPLGRQTKG HHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC HPQPYQAEGWRSDTTLASIAAAVKGAESLWLGADNNGLRSLLPAEQADLAQRIDAAYAQL CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHH LQHRGGLTQPFGAQLEDEQGRSELDALYQGLDRLHRLHQQELARALGVQIGFNAHDGD HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCC >Mature Secondary Structure MIRSNTLRMASGGLLTALLLSACTPADPQAETSKALTDGVLLPAYTHWAETDRRLAASAI CCCCCCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH AYCADNQTLEEAREAFVHAQTAWAGLQPLLIGPMGEGNLAWQVQFWPDKKNLVARQVTAL HHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCHHHHHHHHHHHH LGAKPNLTQADLDGASVVVQGLSAYEYVLFDKTIDLGDSATKARYCPLLTSIGEHQQQLA HCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH AGVLQQWEDKDGMADQLRSFPNERYAEPSEAIAELLRVQVTALDGLKKKLGAPLGRQTKG HHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC HPQPYQAEGWRSDTTLASIAAAVKGAESLWLGADNNGLRSLLPAEQADLAQRIDAAYAQL CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHH LQHRGGLTQPFGAQLEDEQGRSELDALYQGLDRLHRLHQQELARALGVQIGFNAHDGD HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA