| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146283467
Identifier: 146283467
GI number: 146283467
Start: 3380177
End: 3381271
Strand: Direct
Name: 146283467
Synonym: PST_3140
Alternate gene names: NA
Gene position: 3380177-3381271 (Clockwise)
Preceding gene: 146283466
Following gene: 146283468
Centisome position: 74.01
GC content: 68.22
Gene sequence:
>1095_bases ATGAAACGTCGAACCCTGCTCGGTCTGGGTGGCGCCGTGCTCGCGGCAAGTGGTATCGCGGGCTGGAGCCTGAGCCGTCA TGGCGGGCGGCCGGTGCTGCTCTCCGCACGCAACGATCAGCAGGGACGACACTATGCCGTCGGCTATCGGCTCGACGGGA GCCAGGTGTTCGCCACCCCGGTCGCCGAGCGCTGCCATGACGTGTATCCGCATCCCTACCTGCCGCTGGCGGTGTTCGTC GGTCGGCGCCCTAGCCGCGAGAGTTACCTGATCGATTCGCGTGACGGACGCCTGCTGCAGGTGCTGGCGTCGCCACCCGA CCGGCACTTCTACGGCCACGGCGTGTTCCACCGCGATGGCGAATGGTTCTACACCACCGAGAACGACACCCGCGACGCTG GCCGTGGCGTGCTTGGTGTCTACCGCCTGCAAGGCCGAGAGCTGGTGCGCGTCGGCGAGCACGCAACCCATGGCATCGGC CCCCACCAGCTGCTGTGGATGCCGGATCACCAAACCCTGGTGATCGCCAACGGCGGCATCCGCACCGAGGCCGACAGCCG CGAGATGATGAATCTCGACGCCATGGAGCCGAGCCTGGTGCTGCTGCGTCGCGACGGCAGCCTGGTCAGCAAGGAACAAC TGCCGGAGCGCATGAACAGCGTGCGCCACCTCGCCGTCGCCGCCGACGGCACGGTCGTCAGCGGCCAGCAGTACGAAGGC GACCCGATGGACCGCGTGCCGCTGCTGGCGATCAAGCGGCCCGGGCAGCCCTTCCAGCACTTCCCGCTGGGCGAGGCGCA GCGGCAGATCATGAACCAGTACACCGCCAGTCTCGCCATCCACGACGAGCTGCGGCTGCTGGCCGTCACCGCGCCACGCG GCAACAAGGTGTTCATCTGGGACCTGGACAGTGCCGCGCTGCGCCAGGAGGCTCACCTGCCCGATTGCGCTGGCGTCGCG GCAGTTGCCGAGGGCTTCGTGGTCAGCTCCGGACAGGGCCGCTGTCGCCTGTTCGACTGCCGCGGCGAGCGTTTCACCAG TACGCCGCTGCAGATGCCGGCAGGGCTCTGGGACAACCATCTGCGCATCGTCTAG
Upstream 100 bases:
>100_bases CTCTACCAGGGCCTCGACCGTCTGCATCGCCTGCACCAGCAGGAGCTGGCCCGCGCCCTCGGCGTGCAGATCGGCTTCAA CGCTCACGACGGGGACTGAG
Downstream 100 bases:
>100_bases CTCAAGAAACACGTCACCCGGCCGATGTGCTGGGCAACGGCAGGGATGCTCATTGACGTTTTCTCAAACGACGAGACCTT GCCCATGCTCCAGAAGTCCC
Product: putative lipoprotein
Products: NA
Alternate protein names: Secreted Protein; Lipoprotein; Tat Pathway Signal Sequence Domain-Containing Protein
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKRRTLLGLGGAVLAASGIAGWSLSRHGGRPVLLSARNDQQGRHYAVGYRLDGSQVFATPVAERCHDVYPHPYLPLAVFV GRRPSRESYLIDSRDGRLLQVLASPPDRHFYGHGVFHRDGEWFYTTENDTRDAGRGVLGVYRLQGRELVRVGEHATHGIG PHQLLWMPDHQTLVIANGGIRTEADSREMMNLDAMEPSLVLLRRDGSLVSKEQLPERMNSVRHLAVAADGTVVSGQQYEG DPMDRVPLLAIKRPGQPFQHFPLGEAQRQIMNQYTASLAIHDELRLLAVTAPRGNKVFIWDLDSAALRQEAHLPDCAGVA AVAEGFVVSSGQGRCRLFDCRGERFTSTPLQMPAGLWDNHLRIV
Sequences:
>Translated_364_residues MKRRTLLGLGGAVLAASGIAGWSLSRHGGRPVLLSARNDQQGRHYAVGYRLDGSQVFATPVAERCHDVYPHPYLPLAVFV GRRPSRESYLIDSRDGRLLQVLASPPDRHFYGHGVFHRDGEWFYTTENDTRDAGRGVLGVYRLQGRELVRVGEHATHGIG PHQLLWMPDHQTLVIANGGIRTEADSREMMNLDAMEPSLVLLRRDGSLVSKEQLPERMNSVRHLAVAADGTVVSGQQYEG DPMDRVPLLAIKRPGQPFQHFPLGEAQRQIMNQYTASLAIHDELRLLAVTAPRGNKVFIWDLDSAALRQEAHLPDCAGVA AVAEGFVVSSGQGRCRLFDCRGERFTSTPLQMPAGLWDNHLRIV >Mature_364_residues MKRRTLLGLGGAVLAASGIAGWSLSRHGGRPVLLSARNDQQGRHYAVGYRLDGSQVFATPVAERCHDVYPHPYLPLAVFV GRRPSRESYLIDSRDGRLLQVLASPPDRHFYGHGVFHRDGEWFYTTENDTRDAGRGVLGVYRLQGRELVRVGEHATHGIG PHQLLWMPDHQTLVIANGGIRTEADSREMMNLDAMEPSLVLLRRDGSLVSKEQLPERMNSVRHLAVAADGTVVSGQQYEG DPMDRVPLLAIKRPGQPFQHFPLGEAQRQIMNQYTASLAIHDELRLLAVTAPRGNKVFIWDLDSAALRQEAHLPDCAGVA AVAEGFVVSSGQGRCRLFDCRGERFTSTPLQMPAGLWDNHLRIV
Specific function: Unknown
COG id: COG3490
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40352; Mature: 40352
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRTLLGLGGAVLAASGIAGWSLSRHGGRPVLLSARNDQQGRHYAVGYRLDGSQVFATP CCCCEEEECCHHHHHHCCCCCCEECCCCCCEEEEECCCCCCCCEEEEEEEECCCEEEECH VAERCHDVYPHPYLPLAVFVGRRPSRESYLIDSRDGRLLQVLASPPDRHFYGHGVFHRDG HHHHHHHCCCCCCCCCEEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCEEEECC EWFYTTENDTRDAGRGVLGVYRLQGRELVRVGEHATHGIGPHQLLWMPDHQTLVIANGGI CEEEECCCCCCHHCCCEEEEEEECCCEEEEECCCHHCCCCCCEEEEECCCCEEEEECCCE RTEADSREMMNLDAMEPSLVLLRRDGSLVSKEQLPERMNSVRHLAVAADGTVVSGQQYEG ECCCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHEEEEEEECCEEECCCCCCC DPMDRVPLLAIKRPGQPFQHFPLGEAQRQIMNQYTASLAIHDELRLLAVTAPRGNKVFIW CCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEEEECCEEEEEEECCCCCEEEEE DLDSAALRQEAHLPDCAGVAAVAEGFVVSSGQGRCRLFDCRGERFTSTPLQMPAGLWDNH ECCHHHHHHHCCCCCHHHHHHHHCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCC LRIV EEEC >Mature Secondary Structure MKRRTLLGLGGAVLAASGIAGWSLSRHGGRPVLLSARNDQQGRHYAVGYRLDGSQVFATP CCCCEEEECCHHHHHHCCCCCCEECCCCCCEEEEECCCCCCCCEEEEEEEECCCEEEECH VAERCHDVYPHPYLPLAVFVGRRPSRESYLIDSRDGRLLQVLASPPDRHFYGHGVFHRDG HHHHHHHCCCCCCCCCEEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCEEEECC EWFYTTENDTRDAGRGVLGVYRLQGRELVRVGEHATHGIGPHQLLWMPDHQTLVIANGGI CEEEECCCCCCHHCCCEEEEEEECCCEEEEECCCHHCCCCCCEEEEECCCCEEEEECCCE RTEADSREMMNLDAMEPSLVLLRRDGSLVSKEQLPERMNSVRHLAVAADGTVVSGQQYEG ECCCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHEEEEEEECCEEECCCCCCC DPMDRVPLLAIKRPGQPFQHFPLGEAQRQIMNQYTASLAIHDELRLLAVTAPRGNKVFIW CCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEEEECCEEEEEEECCCCCEEEEE DLDSAALRQEAHLPDCAGVAAVAEGFVVSSGQGRCRLFDCRGERFTSTPLQMPAGLWDNH ECCHHHHHHHCCCCCHHHHHHHHCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCC LRIV EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA