| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
Click here to switch to the map view.
The map label for this gene is yghX [H]
Identifier: 146283280
GI number: 146283280
Start: 3170628
End: 3171515
Strand: Direct
Name: yghX [H]
Synonym: PST_2945
Alternate gene names: 146283280
Gene position: 3170628-3171515 (Clockwise)
Preceding gene: 146283279
Following gene: 146283281
Centisome position: 69.42
GC content: 66.1
Gene sequence:
>888_bases ATGGAACGTCTGACTGCCAGAGACTTCGCCCCCGAACTGCTCGAGCTCTACGATTTCTACGTGCACGGCAAACTCAACCG CCGCGAATTCCTCGACCGCGCCACCGCCTTCACCCTGTGCAGCATGACGGCGGTCGCCGTGCTCGACGCGCTCACGCCCA ACTATGCGCTGGCGCAACAGATCGCCTTTACCGACCCCGACATCGTCGCCGAGTATGTCCGCTATCCCTCGCCCAGAGGC CACGGCGAGGTCCGTGCTTATCTGGTGCGCCCGGCCAAGGCCGAGGGCAAGGTGCCGGGCATCGTCGTCGTGCACGAGAA CCGTGGCCTCAATCCCTATATCGAAGACGTGGCCCGGCGCGTGGCCAAGGCCGGGTTCGTCGCCCTGGCGCCCGACGGCC TGAGTTCGGTCGGCGGCTACCCCGGCAACGACGACAAGGGCCGTGAACTGCAGGCTCAGGTCGATCCGCAGAAGCTGATG AACGACTTCTTCGCCGCCATCGAATGGCTTATGGCCCACGAGACCACCAGCGACAAGGTCGGCATCACCGGCTTCTGCTA CGGCGGCGGGGTGGCGAACGCCGCATCGGTGGCCTACCCCGAACTCGGCGCCGCCGTGCCGTTCTATGGCCGCCAGGCGG ACCCGGCGGATGTGGAGAAGATCCGCGCGCCGCTGCTGTTCCACTTCGCCGAACAGGACGAGCGCGTCAACGAAACCTGG CCCGCCTACGAAGCCGCACTCAAGGCCGCCGGCAAGCCCTACGAGGCCTATATCTACCCCGGCACCCACCACGGCTTTCA CAACGACAGCACGCCGCGTTACGACGAGCCGGCAGCCGAGCTGGCGTGGCAACGCACCATTGCCTGGTTCCAGCGCCATC TGAACTGA
Upstream 100 bases:
>100_bases GCGAATCCAGGGCCTGAACCGGTAAATCGTCAGCAACCGCACCGGTGCTGACATGGCTGTCTCCGCCCTGCCATCTTTCG CCCCACCGAAGGAGCCGCCG
Downstream 100 bases:
>100_bases CTGCGACGGCCTTTTCGTCGCCGCTTTCCGGTCTGTGCCACACCCGGTGAGTTCGAGCCGAGGCGTCATGGTCGATACAT TCATCCGCGCATGTTGACGT
Product: dienelactone hydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MERLTARDFAPELLELYDFYVHGKLNRREFLDRATAFTLCSMTAVAVLDALTPNYALAQQIAFTDPDIVAEYVRYPSPRG HGEVRAYLVRPAKAEGKVPGIVVVHENRGLNPYIEDVARRVAKAGFVALAPDGLSSVGGYPGNDDKGRELQAQVDPQKLM NDFFAAIEWLMAHETTSDKVGITGFCYGGGVANAASVAYPELGAAVPFYGRQADPADVEKIRAPLLFHFAEQDERVNETW PAYEAALKAAGKPYEAYIYPGTHHGFHNDSTPRYDEPAAELAWQRTIAWFQRHLN
Sequences:
>Translated_295_residues MERLTARDFAPELLELYDFYVHGKLNRREFLDRATAFTLCSMTAVAVLDALTPNYALAQQIAFTDPDIVAEYVRYPSPRG HGEVRAYLVRPAKAEGKVPGIVVVHENRGLNPYIEDVARRVAKAGFVALAPDGLSSVGGYPGNDDKGRELQAQVDPQKLM NDFFAAIEWLMAHETTSDKVGITGFCYGGGVANAASVAYPELGAAVPFYGRQADPADVEKIRAPLLFHFAEQDERVNETW PAYEAALKAAGKPYEAYIYPGTHHGFHNDSTPRYDEPAAELAWQRTIAWFQRHLN >Mature_295_residues MERLTARDFAPELLELYDFYVHGKLNRREFLDRATAFTLCSMTAVAVLDALTPNYALAQQIAFTDPDIVAEYVRYPSPRG HGEVRAYLVRPAKAEGKVPGIVVVHENRGLNPYIEDVARRVAKAGFVALAPDGLSSVGGYPGNDDKGRELQAQVDPQKLM NDFFAAIEWLMAHETTSDKVGITGFCYGGGVANAASVAYPELGAAVPFYGRQADPADVEKIRAPLLFHFAEQDERVNETW PAYEAALKAAGKPYEAYIYPGTHHGFHNDSTPRYDEPAAELAWQRTIAWFQRHLN
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994982, Length=254, Percent_Identity=31.496062992126, Blast_Score=106, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: NA
Molecular weight: Translated: 32706; Mature: 32706
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERLTARDFAPELLELYDFYVHGKLNRREFLDRATAFTLCSMTAVAVLDALTPNYALAQQ CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IAFTDPDIVAEYVRYPSPRGHGEVRAYLVRPAKAEGKVPGIVVVHENRGLNPYIEDVARR HHCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHH VAKAGFVALAPDGLSSVGGYPGNDDKGRELQAQVDPQKLMNDFFAAIEWLMAHETTSDKV HHHCCEEEECCCCHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC GITGFCYGGGVANAASVAYPELGAAVPFYGRQADPADVEKIRAPLLFHFAEQDERVNETW CCEEEEECCCCCCHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC PAYEAALKAAGKPYEAYIYPGTHHGFHNDSTPRYDEPAAELAWQRTIAWFQRHLN HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MERLTARDFAPELLELYDFYVHGKLNRREFLDRATAFTLCSMTAVAVLDALTPNYALAQQ CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IAFTDPDIVAEYVRYPSPRGHGEVRAYLVRPAKAEGKVPGIVVVHENRGLNPYIEDVARR HHCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHH VAKAGFVALAPDGLSSVGGYPGNDDKGRELQAQVDPQKLMNDFFAAIEWLMAHETTSDKV HHHCCEEEECCCCHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC GITGFCYGGGVANAASVAYPELGAAVPFYGRQADPADVEKIRAPLLFHFAEQDERVNETW CCEEEEECCCCCCHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC PAYEAALKAAGKPYEAYIYPGTHHGFHNDSTPRYDEPAAELAWQRTIAWFQRHLN HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]