| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146283276
Identifier: 146283276
GI number: 146283276
Start: 3165056
End: 3166219
Strand: Direct
Name: 146283276
Synonym: PST_2941
Alternate gene names: NA
Gene position: 3165056-3166219 (Clockwise)
Preceding gene: 146283275
Following gene: 146283278
Centisome position: 69.3
GC content: 65.81
Gene sequence:
>1164_bases ATGCCCGCCCCCGACCTGACCTCGCCCGTTGCGGCGCGCCTTCAATCCATCGACGCGCTGCGCGGCCTGGTGATTCTGTT CATGCTGCTGGACCATGTCCGCGAAACCTTTCTGCTGCACATGCAGGTGCCGGATCCGATGGACGTGGCGGTCACCGAGC CGGCACTGTTCTTCAGCCGCACCCTGGCGCACCTGTGCGCACCGGTATTCATCTTCCTGACCGGGTTATCAGCGTTCCTC TATGGCGAAAAGCATCAGGACCGCCACGCGGTGTCGAGCTTTCTGCTCAAGCGCGGGCTGTTTCTGGTGGCGCTCGAGTT CACCCTGGTCAACTTCGCCTGGACCTTCCAGTTCCCGCCGCAGGTCATCTACCTCCAGGTGATCTGGGCCATCGGCCTGA GCATGCTCGCCCTCTCGGCGCTGCTCTGGCTGCCACGCCCGTGGCTGGTGCTGCTCGGACTGCTGATCATCGGCGGGCAC AACCTGCTCGATCCGCTGCACTTCCCCGTCGGATCACCCATGCACCTGCCGTGGGCCATCCTGCATGATCGCGGCTGGCT CGAGGTCTCGGACAGCCTGCGCCTGCGCACCTCCTACCCGCTGTTGCCCTGGATCGGCGTGATCGCCCTGGGCTACGCCG CCGGCCCCTGGTTCGGACGCAACGCCGATGCCGAACGCCGTCAGCACAACCTCGCCAACTGGGGCAGGGCCGCGCTGCTG CTGTTCGTTCTGCTACGCCTGATCAACGGTTACGGCGAGCAGCCCTGGGTGGTTGGCGAGGATGGACTGCGGACACTGAT GAGCCTGCTGAACATCACCAAATATCCGCCGTCGCTGCTGTTCCTCTGCCTGACCCTGGGCACCGGCCTGCTTCTGCTGC GCCACTTCGAGCGCCGCCAGGATCGCGCCTGGCTGCGCCCGCTGACGGTGTTCGGCGCAGCGCCGATGTTCTTCTACCTG CTGCACCTTTACGTGCTGAAGCTGCTCTACCTCGCCGCGGTGGCGATCTGGGGCCTGAACCGTGGCAGCCACTTCGGCTT CGAGGCGGTCTGGCCGCTGTGGTTGTGGACCGTTGTGCTGGCGGTGGCGCTGTACCCGGCCGTGCGCTGGTTTGCCGAGC TCAAGGCCCGGCGCCGGGACATCGCCTGGCTCAAGTACCTGTAA
Upstream 100 bases:
>100_bases GTATCGCACCTTGTCGGGCGCCGCCGTAGTCTGGCCGTGAGGCATCACGTCCTCATGGCCTCCGCGCCCGTTGTCCGCGA ACTTCTGCCATGAGCCGTGC
Downstream 100 bases:
>100_bases GCTCGGGTCTCATGCCGCATCGGCAGCCTTCAGACGCAAGTCGACGGCTGCAGTGCGGTGCGCGGCTGGCGAACGGGCTC AGAACATCCCCAGCGCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MPAPDLTSPVAARLQSIDALRGLVILFMLLDHVRETFLLHMQVPDPMDVAVTEPALFFSRTLAHLCAPVFIFLTGLSAFL YGEKHQDRHAVSSFLLKRGLFLVALEFTLVNFAWTFQFPPQVIYLQVIWAIGLSMLALSALLWLPRPWLVLLGLLIIGGH NLLDPLHFPVGSPMHLPWAILHDRGWLEVSDSLRLRTSYPLLPWIGVIALGYAAGPWFGRNADAERRQHNLANWGRAALL LFVLLRLINGYGEQPWVVGEDGLRTLMSLLNITKYPPSLLFLCLTLGTGLLLLRHFERRQDRAWLRPLTVFGAAPMFFYL LHLYVLKLLYLAAVAIWGLNRGSHFGFEAVWPLWLWTVVLAVALYPAVRWFAELKARRRDIAWLKYL
Sequences:
>Translated_387_residues MPAPDLTSPVAARLQSIDALRGLVILFMLLDHVRETFLLHMQVPDPMDVAVTEPALFFSRTLAHLCAPVFIFLTGLSAFL YGEKHQDRHAVSSFLLKRGLFLVALEFTLVNFAWTFQFPPQVIYLQVIWAIGLSMLALSALLWLPRPWLVLLGLLIIGGH NLLDPLHFPVGSPMHLPWAILHDRGWLEVSDSLRLRTSYPLLPWIGVIALGYAAGPWFGRNADAERRQHNLANWGRAALL LFVLLRLINGYGEQPWVVGEDGLRTLMSLLNITKYPPSLLFLCLTLGTGLLLLRHFERRQDRAWLRPLTVFGAAPMFFYL LHLYVLKLLYLAAVAIWGLNRGSHFGFEAVWPLWLWTVVLAVALYPAVRWFAELKARRRDIAWLKYL >Mature_386_residues PAPDLTSPVAARLQSIDALRGLVILFMLLDHVRETFLLHMQVPDPMDVAVTEPALFFSRTLAHLCAPVFIFLTGLSAFLY GEKHQDRHAVSSFLLKRGLFLVALEFTLVNFAWTFQFPPQVIYLQVIWAIGLSMLALSALLWLPRPWLVLLGLLIIGGHN LLDPLHFPVGSPMHLPWAILHDRGWLEVSDSLRLRTSYPLLPWIGVIALGYAAGPWFGRNADAERRQHNLANWGRAALLL FVLLRLINGYGEQPWVVGEDGLRTLMSLLNITKYPPSLLFLCLTLGTGLLLLRHFERRQDRAWLRPLTVFGAAPMFFYLL HLYVLKLLYLAAVAIWGLNRGSHFGFEAVWPLWLWTVVLAVALYPAVRWFAELKARRRDIAWLKYL
Specific function: Unknown
COG id: COG3503
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44108; Mature: 43977
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPDLTSPVAARLQSIDALRGLVILFMLLDHVRETFLLHMQVPDPMDVAVTEPALFFSR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHH TLAHLCAPVFIFLTGLSAFLYGEKHQDRHAVSSFLLKRGLFLVALEFTLVNFAWTFQFPP HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC QVIYLQVIWAIGLSMLALSALLWLPRPWLVLLGLLIIGGHNLLDPLHFPVGSPMHLPWAI HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHCCCHHCCCCCCCCCCHHE LHDRGWLEVSDSLRLRTSYPLLPWIGVIALGYAAGPWFGRNADAERRQHNLANWGRAALL EECCCCEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH LFVLLRLINGYGEQPWVVGEDGLRTLMSLLNITKYPPSLLFLCLTLGTGLLLLRHFERRQ HHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH DRAWLRPLTVFGAAPMFFYLLHLYVLKLLYLAAVAIWGLNRGSHFGFEAVWPLWLWTVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH AVALYPAVRWFAELKARRRDIAWLKYL HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PAPDLTSPVAARLQSIDALRGLVILFMLLDHVRETFLLHMQVPDPMDVAVTEPALFFSR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHH TLAHLCAPVFIFLTGLSAFLYGEKHQDRHAVSSFLLKRGLFLVALEFTLVNFAWTFQFPP HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC QVIYLQVIWAIGLSMLALSALLWLPRPWLVLLGLLIIGGHNLLDPLHFPVGSPMHLPWAI HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHCCCHHCCCCCCCCCCHHE LHDRGWLEVSDSLRLRTSYPLLPWIGVIALGYAAGPWFGRNADAERRQHNLANWGRAALL EECCCCEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH LFVLLRLINGYGEQPWVVGEDGLRTLMSLLNITKYPPSLLFLCLTLGTGLLLLRHFERRQ HHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH DRAWLRPLTVFGAAPMFFYLLHLYVLKLLYLAAVAIWGLNRGSHFGFEAVWPLWLWTVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH AVALYPAVRWFAELKARRRDIAWLKYL HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA