| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146283278
Identifier: 146283278
GI number: 146283278
Start: 3167812
End: 3169467
Strand: Direct
Name: 146283278
Synonym: PST_2943
Alternate gene names: NA
Gene position: 3167812-3169467 (Clockwise)
Preceding gene: 146283276
Following gene: 146283279
Centisome position: 69.36
GC content: 70.05
Gene sequence:
>1656_bases TTGCAGCGCCCGCTGCGGGCCGGCCGAATTGCCATAAGCCCCCGCACGGCCCGGCTGCCTTGCACGGCACCGTCGGCCAC AGCCCTGCTGGCACCCGGAATGTTTATGTCGTCCTTTCGTCTTGCCGTTTGGCCCCTGCTCCTGCTCGCCGCCTGCTACA CGCCCCTGGCCAGCGCCATCGGGCTGGGCGAGATCCGTCTGCATTCGGCGCTGGCCGAGCCGCTCACAGCTGACATCGAG CTGATTGACGCGCGCGGACTGGGTGCCGATGACATCAAGGTGCGCCTGGCACCGAGCGACGTGTTTGCCCGCGCCGGAGT CGAGCGGCCCGACTTCCTCGCCAAGCTGAGCTTCGTGCCGGCGCTCGACGGGAGCGGCCAGCGGATCCGCGTGAGCTCCG CCGCACCGGTGAACGAGCCGTACCTGAACTTCATCGTCGAGCTCAGCCTGCCGGGCGGCCAGCTGCTGCGCGAGTACACC CTGCTGCTGGACCCGCCACTGTACCAGCCCGACCTGCCGGCGCTGCCGCGTGCCCAGCCGCAAGCACCGGCCATCGTCAG CGCGCCACCCGTGGAACCGCCGCGCGCTCGCGTGCTGCCTGCGGTCGAACAGGGCACGCGGTATCGCATCCAGCCCGGCG ACAGCCTCTGGGCCATCACCCAGCGGCTTGAAGGCCGTGCTGTCGGCTCGCACGAAGCGTTGATGGCCGACCTCTACGCA CTCAACCCGGACGCCTTCATCGGCGGTGACCGCAACCGCCTGCGGGTCGGCGCCGATCTGCTGTTGCCGGACGGACTGCA ACATGCCACGCCCAGGCCGACGACCCAGGTGGCCGCCGCGCCTCGCGAAGCCGACGCAGCGATACCTCCTCCCGAGCACA CCGCGCGGCAGACGCCAGTGACAGCTGATCCCGGGCTGGTGGATGTGCTCAGCCAACTCGAAGCCCAGGTGCTGAGCCTG CAGGCGCAGATGGACGCGCAGAATCGCCTGCTTGCCGAAGCACAGCGGAGTCTGGCGCAACGCGAGACCAGCCCGCTCGC CGCGGAATCTGCCGTCGTCACGGCGCCGGTGCCCCGTGAAGTCAGCGTGGAGCGCCAGGCGCCCGCATCCCCGGTTCCTG CGCCTGCCGCGCCCGCTATGACGGTCCAGCCGGACAGCCTCGCCAGCCCCTGGCTGCTCGCCCTTCCCGTGCTGTTCCTG TTGGGCGGCCTGCTGCTACAGCGCCGGCGCGCCAGCGCAGCCGCCACGGCGGCAATCATGGTCGAGGCCCGACCGGCCGG CGTGAAGCGGGCGGAAGCGTCCTTCCCGGACATCAACCCGTTCCAGCGCCAGGTGCCAGTCGTGACGGAAATGACCATGG ACGAATACCTTGGCCACGGTGCTGACCAAATGCCGGCCCCCGTTGCGGCACCGGTACAACCAATGCCGTCGCTGGATGAC ATGATCGTCAGCCTGCCCACGGACCTGGACGAGCTGATCGGCATCGCGTCGGCCCCGGCGCCGGCAACCGACGCCCAATG GCGCGAGCGGCTCAACGAGGCCATCGGCTGCATCGACCGTGGGGAGGTCAATCGCGCCAGCGGTCTGCTGACTGCCCTGC TGGACCGCCCCGACGATGACCGCTTCATCGACGAGCAGCTCGCCCGCAGCGCCTGA
Upstream 100 bases:
>100_bases TCGGCATCTGTGAGCTGATGTGTCGCGCGCGTGAATCAGCCGCCACCGATCCGAAAACTGTGAAGTGGCTAGCAAAATGC CATCATACGAGCCATGATGA
Downstream 100 bases:
>100_bases GGACGCAACCCCGGGACCGCTCCCCCGGTCGTACGGCATACTAGCCAGCCCCCTCTGGAGAACATGCCCGTGGACCTGCT CTTTCTCGGTACCTCGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MQRPLRAGRIAISPRTARLPCTAPSATALLAPGMFMSSFRLAVWPLLLLAACYTPLASAIGLGEIRLHSALAEPLTADIE LIDARGLGADDIKVRLAPSDVFARAGVERPDFLAKLSFVPALDGSGQRIRVSSAAPVNEPYLNFIVELSLPGGQLLREYT LLLDPPLYQPDLPALPRAQPQAPAIVSAPPVEPPRARVLPAVEQGTRYRIQPGDSLWAITQRLEGRAVGSHEALMADLYA LNPDAFIGGDRNRLRVGADLLLPDGLQHATPRPTTQVAAAPREADAAIPPPEHTARQTPVTADPGLVDVLSQLEAQVLSL QAQMDAQNRLLAEAQRSLAQRETSPLAAESAVVTAPVPREVSVERQAPASPVPAPAAPAMTVQPDSLASPWLLALPVLFL LGGLLLQRRRASAAATAAIMVEARPAGVKRAEASFPDINPFQRQVPVVTEMTMDEYLGHGADQMPAPVAAPVQPMPSLDD MIVSLPTDLDELIGIASAPAPATDAQWRERLNEAIGCIDRGEVNRASGLLTALLDRPDDDRFIDEQLARSA
Sequences:
>Translated_551_residues MQRPLRAGRIAISPRTARLPCTAPSATALLAPGMFMSSFRLAVWPLLLLAACYTPLASAIGLGEIRLHSALAEPLTADIE LIDARGLGADDIKVRLAPSDVFARAGVERPDFLAKLSFVPALDGSGQRIRVSSAAPVNEPYLNFIVELSLPGGQLLREYT LLLDPPLYQPDLPALPRAQPQAPAIVSAPPVEPPRARVLPAVEQGTRYRIQPGDSLWAITQRLEGRAVGSHEALMADLYA LNPDAFIGGDRNRLRVGADLLLPDGLQHATPRPTTQVAAAPREADAAIPPPEHTARQTPVTADPGLVDVLSQLEAQVLSL QAQMDAQNRLLAEAQRSLAQRETSPLAAESAVVTAPVPREVSVERQAPASPVPAPAAPAMTVQPDSLASPWLLALPVLFL LGGLLLQRRRASAAATAAIMVEARPAGVKRAEASFPDINPFQRQVPVVTEMTMDEYLGHGADQMPAPVAAPVQPMPSLDD MIVSLPTDLDELIGIASAPAPATDAQWRERLNEAIGCIDRGEVNRASGLLTALLDRPDDDRFIDEQLARSA >Mature_551_residues MQRPLRAGRIAISPRTARLPCTAPSATALLAPGMFMSSFRLAVWPLLLLAACYTPLASAIGLGEIRLHSALAEPLTADIE LIDARGLGADDIKVRLAPSDVFARAGVERPDFLAKLSFVPALDGSGQRIRVSSAAPVNEPYLNFIVELSLPGGQLLREYT LLLDPPLYQPDLPALPRAQPQAPAIVSAPPVEPPRARVLPAVEQGTRYRIQPGDSLWAITQRLEGRAVGSHEALMADLYA LNPDAFIGGDRNRLRVGADLLLPDGLQHATPRPTTQVAAAPREADAAIPPPEHTARQTPVTADPGLVDVLSQLEAQVLSL QAQMDAQNRLLAEAQRSLAQRETSPLAAESAVVTAPVPREVSVERQAPASPVPAPAAPAMTVQPDSLASPWLLALPVLFL LGGLLLQRRRASAAATAAIMVEARPAGVKRAEASFPDINPFQRQVPVVTEMTMDEYLGHGADQMPAPVAAPVQPMPSLDD MIVSLPTDLDELIGIASAPAPATDAQWRERLNEAIGCIDRGEVNRASGLLTALLDRPDDDRFIDEQLARSA
Specific function: Unknown
COG id: COG3170
COG function: function code NU; Tfp pilus assembly protein FimV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58671; Mature: 58671
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRPLRAGRIAISPRTARLPCTAPSATALLAPGMFMSSFRLAVWPLLLLAACYTPLASAI CCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GLGEIRLHSALAEPLTADIELIDARGLGADDIKVRLAPSDVFARAGVERPDFLAKLSFVP CCCHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCHHHHHHCCCCCCHHHHHHHHCC ALDGSGQRIRVSSAAPVNEPYLNFIVELSLPGGQLLREYTLLLDPPLYQPDLPALPRAQP CCCCCCCEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC QAPAIVSAPPVEPPRARVLPAVEQGTRYRIQPGDSLWAITQRLEGRAVGSHEALMADLYA CCCEEEECCCCCCCHHHCCCHHHCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHH LNPDAFIGGDRNRLRVGADLLLPDGLQHATPRPTTQVAAAPREADAAIPPPEHTARQTPV CCCCCEECCCCCEEEECCEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC TADPGLVDVLSQLEAQVLSLQAQMDAQNRLLAEAQRSLAQRETSPLAAESAVVTAPVPRE CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCC VSVERQAPASPVPAPAAPAMTVQPDSLASPWLLALPVLFLLGGLLLQRRRASAAATAAIM CCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE VEARPAGVKRAEASFPDINPFQRQVPVVTEMTMDEYLGHGADQMPAPVAAPVQPMPSLDD EECCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH MIVSLPTDLDELIGIASAPAPATDAQWRERLNEAIGCIDRGEVNRASGLLTALLDRPDDD HHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC RFIDEQLARSA HHHHHHHHHCC >Mature Secondary Structure MQRPLRAGRIAISPRTARLPCTAPSATALLAPGMFMSSFRLAVWPLLLLAACYTPLASAI CCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GLGEIRLHSALAEPLTADIELIDARGLGADDIKVRLAPSDVFARAGVERPDFLAKLSFVP CCCHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCHHHHHHCCCCCCHHHHHHHHCC ALDGSGQRIRVSSAAPVNEPYLNFIVELSLPGGQLLREYTLLLDPPLYQPDLPALPRAQP CCCCCCCEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC QAPAIVSAPPVEPPRARVLPAVEQGTRYRIQPGDSLWAITQRLEGRAVGSHEALMADLYA CCCEEEECCCCCCCHHHCCCHHHCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHH LNPDAFIGGDRNRLRVGADLLLPDGLQHATPRPTTQVAAAPREADAAIPPPEHTARQTPV CCCCCEECCCCCEEEECCEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC TADPGLVDVLSQLEAQVLSLQAQMDAQNRLLAEAQRSLAQRETSPLAAESAVVTAPVPRE CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCC VSVERQAPASPVPAPAAPAMTVQPDSLASPWLLALPVLFLLGGLLLQRRRASAAATAAIM CCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE VEARPAGVKRAEASFPDINPFQRQVPVVTEMTMDEYLGHGADQMPAPVAAPVQPMPSLDD EECCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH MIVSLPTDLDELIGIASAPAPATDAQWRERLNEAIGCIDRGEVNRASGLLTALLDRPDDD HHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC RFIDEQLARSA HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA