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The map label for this gene is ydhP [H]

Identifier: 146283253

GI number: 146283253

Start: 3142458

End: 3143684

Strand: Direct

Name: ydhP [H]

Synonym: PST_2918

Alternate gene names: 146283253

Gene position: 3142458-3143684 (Clockwise)

Preceding gene: 146283251

Following gene: 146283254

Centisome position: 68.8

GC content: 68.62

Gene sequence:

>1227_bases
ATGACGGCGCCAGCCACCGCAGCGACTCCGCCCCTTTCCGCCCGAGCCGTGCTGCTGATCGAACTGGCCCTGGCCATGGG
CGGTTTTGCCATCGGCACCGGCGAGTTCGCCATCATGGGCCTGATGCCCAATGTGGCCGAGGGCCTTGGCATCAGCGAAC
CCCAGGTGGGCAACGTGATCAGTACCTACGCGCTGGGCGTGGTGGTGGGTGCGCCGCTGCTGGCGATCCTCGGCTCGCGG
CTGCACCGCCTGCACCTGCTGCTGTTGCTGATGGGCTTCTTCGCCCTGGGCAACTTCGCCAGTGCCCTGGCGCCCGACTA
CCCGACCCTGATGATCGCCCGCTTCGTCACCGGCCTGCCCCACGGTGCCTATTTCGGTGTGGCAATGCTGGTGGCCGCCT
CCATGGTGCCGCCGGACAAGCGCGCCCAGGCCGTGGCGCGGGTGCTGATGGGCCTGACTGTGGCGATCCTGATCGGCAAC
CCGCTGGCCACCTGGCTCGGGCAGTGGCTGAGCTGGCGCTACGCGTTCGCCCTGGTCGGTGCCATCGCCCTGCTGACGGT
GCTGCTGGTGGCGCTGTTCCTTCCGCTCAACCGCGACGAGCCGCGAAACAGCCCGCTGCACGAGATCCGCGCCTTCAATC
GGCCGCAGGTCTGGCTGGCCCTGGCGATCAGCTCCATCGGCTTCGCCGGCATGTTCTGCGTGTTCAGCTACATGGCGCCG
ACCCTGCTGGAAGTCACCGGCGTCAATGCCGGATGGATTCCCTTCGCCCTGGCCGCCTTCGGCCTCGGCGGCATCGTCGG
CAACGTGTTCGGCGGCTGGCTGTTCGATCGCCTGCGTTTCCAGGCGGTCGCCTGGCTCCTGCTGTGGAGCGCCCTGGTGC
TGCTGGTGTTTCCGCTGGCCGCGCACTCGGTGTGGACCATCTTTCCGGCGGTATTCGCCGTGGGCACCATGGTCTCGCTG
TCACCGGCCCTGCAGACCCATCTGATGGACGTCGCGGCGGATGCCCAGACTCTGGCGGCAGCCTCCAACCATGCCGCCTT
CAACATCGCCAACGCCTTGGGACCCTGGCTCGGCGGTCTGGCGATCACCGCCGGACTCGGCTGGACCTCCACCGGTTATA
TCGGCGCCGCGACGGCCGTAGGCGGCCTGCTGGTGTTCGCCTGGGCCTGGAAGGTGCAACGCAGCGAGCAGGAGGCCGAC
GCCCGCAGCGCCGCCTGCTGTTCCTGA

Upstream 100 bases:

>100_bases
TGCAATCCCACCACCCTGTGATCTCCTTCTTTGGCAGTCGGGCTTTACCTGAGCCCGCAAGCGTGAATAATGCCGCCCCT
TTCGACGTGACGAGGTATCC

Downstream 100 bases:

>100_bases
TGCCGAATTTCGCCTGGCGAGCGGCCTCCAGCCTGGCGCGCAACATGCAGTAATCAGTGCTGCGACGACCCGTCTTGCAG
ATCGTCCGGCAAGCGGGTCC

Product: major facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MTAPATAATPPLSARAVLLIELALAMGGFAIGTGEFAIMGLMPNVAEGLGISEPQVGNVISTYALGVVVGAPLLAILGSR
LHRLHLLLLLMGFFALGNFASALAPDYPTLMIARFVTGLPHGAYFGVAMLVAASMVPPDKRAQAVARVLMGLTVAILIGN
PLATWLGQWLSWRYAFALVGAIALLTVLLVALFLPLNRDEPRNSPLHEIRAFNRPQVWLALAISSIGFAGMFCVFSYMAP
TLLEVTGVNAGWIPFALAAFGLGGIVGNVFGGWLFDRLRFQAVAWLLLWSALVLLVFPLAAHSVWTIFPAVFAVGTMVSL
SPALQTHLMDVAADAQTLAAASNHAAFNIANALGPWLGGLAITAGLGWTSTGYIGAATAVGGLLVFAWAWKVQRSEQEAD
ARSAACCS

Sequences:

>Translated_408_residues
MTAPATAATPPLSARAVLLIELALAMGGFAIGTGEFAIMGLMPNVAEGLGISEPQVGNVISTYALGVVVGAPLLAILGSR
LHRLHLLLLLMGFFALGNFASALAPDYPTLMIARFVTGLPHGAYFGVAMLVAASMVPPDKRAQAVARVLMGLTVAILIGN
PLATWLGQWLSWRYAFALVGAIALLTVLLVALFLPLNRDEPRNSPLHEIRAFNRPQVWLALAISSIGFAGMFCVFSYMAP
TLLEVTGVNAGWIPFALAAFGLGGIVGNVFGGWLFDRLRFQAVAWLLLWSALVLLVFPLAAHSVWTIFPAVFAVGTMVSL
SPALQTHLMDVAADAQTLAAASNHAAFNIANALGPWLGGLAITAGLGWTSTGYIGAATAVGGLLVFAWAWKVQRSEQEAD
ARSAACCS
>Mature_407_residues
TAPATAATPPLSARAVLLIELALAMGGFAIGTGEFAIMGLMPNVAEGLGISEPQVGNVISTYALGVVVGAPLLAILGSRL
HRLHLLLLLMGFFALGNFASALAPDYPTLMIARFVTGLPHGAYFGVAMLVAASMVPPDKRAQAVARVLMGLTVAILIGNP
LATWLGQWLSWRYAFALVGAIALLTVLLVALFLPLNRDEPRNSPLHEIRAFNRPQVWLALAISSIGFAGMFCVFSYMAPT
LLEVTGVNAGWIPFALAAFGLGGIVGNVFGGWLFDRLRFQAVAWLLLWSALVLLVFPLAAHSVWTIFPAVFAVGTMVSLS
PALQTHLMDVAADAQTLAAASNHAAFNIANALGPWLGGLAITAGLGWTSTGYIGAATAVGGLLVFAWAWKVQRSEQEADA
RSAACCS

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=390, Percent_Identity=39.7435897435897, Blast_Score=217, Evalue=8e-58,
Organism=Escherichia coli, GI1786595, Length=351, Percent_Identity=37.3219373219373, Blast_Score=210, Evalue=1e-55,
Organism=Escherichia coli, GI145693198, Length=342, Percent_Identity=24.5614035087719, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787808, Length=399, Percent_Identity=26.5664160401003, Blast_Score=90, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42746; Mature: 42615

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPATAATPPLSARAVLLIELALAMGGFAIGTGEFAIMGLMPNVAEGLGISEPQVGNVI
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCEEEECCCCHHHHCCCCCCCCHHHHH
STYALGVVVGAPLLAILGSRLHRLHLLLLLMGFFALGNFASALAPDYPTLMIARFVTGLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
HGAYFGVAMLVAASMVPPDKRAQAVARVLMGLTVAILIGNPLATWLGQWLSWRYAFALVG
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AIALLTVLLVALFLPLNRDEPRNSPLHEIRAFNRPQVWLALAISSIGFAGMFCVFSYMAP
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TLLEVTGVNAGWIPFALAAFGLGGIVGNVFGGWLFDRLRFQAVAWLLLWSALVLLVFPLA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHSVWTIFPAVFAVGTMVSLSPALQTHLMDVAADAQTLAAASNHAAFNIANALGPWLGGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AITAGLGWTSTGYIGAATAVGGLLVFAWAWKVQRSEQEADARSAACCS
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TAPATAATPPLSARAVLLIELALAMGGFAIGTGEFAIMGLMPNVAEGLGISEPQVGNVI
CCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCEEEECCCCHHHHCCCCCCCCHHHHH
STYALGVVVGAPLLAILGSRLHRLHLLLLLMGFFALGNFASALAPDYPTLMIARFVTGLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
HGAYFGVAMLVAASMVPPDKRAQAVARVLMGLTVAILIGNPLATWLGQWLSWRYAFALVG
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AIALLTVLLVALFLPLNRDEPRNSPLHEIRAFNRPQVWLALAISSIGFAGMFCVFSYMAP
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TLLEVTGVNAGWIPFALAAFGLGGIVGNVFGGWLFDRLRFQAVAWLLLWSALVLLVFPLA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHSVWTIFPAVFAVGTMVSLSPALQTHLMDVAADAQTLAAASNHAAFNIANALGPWLGGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AITAGLGWTSTGYIGAATAVGGLLVFAWAWKVQRSEQEADARSAACCS
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]