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The map label for this gene is dapD

Identifier: 146283174

GI number: 146283174

Start: 3057675

End: 3058709

Strand: Direct

Name: dapD

Synonym: PST_2839

Alternate gene names: NA

Gene position: 3057675-3058709 (Clockwise)

Preceding gene: 146283173

Following gene: 146283175

Centisome position: 66.95

GC content: 66.38

Gene sequence:

>1035_bases
ATGTCTGCAACCCTCTTCAGCCTCGCCTTTGGCGTCGGCACCCAGAACCGCCAGGGCGACTGGCTGGAAGTCTTCTACGC
GCAGCCGCTGTTGCAACCGGCCGGCGAGCTGGTCGACGCCATCGCCCCGCTGCTCGGCTACGCCGGCGGCAACCAGGCGA
TCGCCATCACCACCACCCAGGCGGCGCAGCTGGCCGACGCGCTGAAGCCGCTGGACACCGCCCAGCATGCCCTGCTGACC
CGTCTGGCAGAAAGCCAGCGCCCGCTGGTGGTTACCCTGCTGGCCGAAGACGCAGCCCTGACCTCGACGCCCGAGGCCTA
CCTCAAGCTGCACCTGATCTCCCATCGTCTGGTCAAGCCGCACGGCCTGAACCTGACCGGCATCTTCCCGCTGCTACCCA
ACGTCGCCTGGACCAACCAGGGCGCCGTGGATCTCGCCGAACTGGCCGAGCGCCAACTGGAAGCGCGGTTGAAGGGCGAC
CTGCTGGAAGTCTTCTCGGTGGACAAGTTCCCGAAGATGACCGACTACGTGGTGCCGGCCGGCGTGCGTATCGCCGATAC
CGCGCGCGTGCGCCTTGGCGCCTATGTGGGTGAAGGCACCACCGTCATGCACGAAGGCTTCATCAACTTCAACGCGGGCA
CCCAAGGTCCGGGCATGATCGAAGGCCGCGTGTCGGCCGGCGTGTTCGTTGGCAAGGGTTCGGACCTGGGCGGCGGCTGC
TCGACCATGGGCACCCTCTCCGGCGGCGGCAACATCGTCATTTCGGTTGGCGAAGGCTGCCTGATCGGCGCCAATGCCGG
CATCGGCATTCCGCTGGGCGATCGCAACACGGTTGAGTCGGGCCTGTACATCACCGCTGGCACCAAGGTCAGCCTGCTCG
ACGAGAACGACCAGCTGGTGAAAGTGGTCAAGGCTCGCGACCTGGCCGGCCAAAGCGACCTGCTGTTCCGCCGCAACTCG
CAGACCGGCACCGTGGAGTGCAAGACCCACAAGTCGGCCATCGAGCTGAACGAGGCGCTGCACGCGCATAACTGA

Upstream 100 bases:

>100_bases
CCCTGATTGGCTTCAAGCCCGATCTTTACGCTGCCGCACTGGCAGCGCCGAACTGACAGCCGCTCGCCGGACGGCGCGGC
CATCGAAAAAGGATAATCCC

Downstream 100 bases:

>100_bases
CGGGAGCAGCGGCAAGCTGCGAGCCATGAGCGCCTGCCTTGCCGCACCCTGTTGCACGAGGCTTGCCGCTTATGGCCCTG
TTCTCCCCCTGGCGCGCTGA

Product: tetrahydrodipicolinate succinylase

Products: CoA; (R)-2-(succinylamino)-6-oxoheptanedioate

Alternate protein names: Transferase; Tetrahydrodipicolinate Succinylase; Tetrahydropicolinate Succinylase; Tetrahydrodipicolinate N- Succinyltransferase; Transferase Hexapeptide Repeat Containing Protein; Succinyltransferase; Succinyl-Transferase; Tranferase; Tetrahydrodipicolinate N-Succinyltransferase-Like Protein; Lysine Biosynthesis-Like Protein; Transferase Tetrahydrodipicolinate N-Succinyltransferase

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MSATLFSLAFGVGTQNRQGDWLEVFYAQPLLQPAGELVDAIAPLLGYAGGNQAIAITTTQAAQLADALKPLDTAQHALLT
RLAESQRPLVVTLLAEDAALTSTPEAYLKLHLISHRLVKPHGLNLTGIFPLLPNVAWTNQGAVDLAELAERQLEARLKGD
LLEVFSVDKFPKMTDYVVPAGVRIADTARVRLGAYVGEGTTVMHEGFINFNAGTQGPGMIEGRVSAGVFVGKGSDLGGGC
STMGTLSGGGNIVISVGEGCLIGANAGIGIPLGDRNTVESGLYITAGTKVSLLDENDQLVKVVKARDLAGQSDLLFRRNS
QTGTVECKTHKSAIELNEALHAHN

Sequences:

>Translated_344_residues
MSATLFSLAFGVGTQNRQGDWLEVFYAQPLLQPAGELVDAIAPLLGYAGGNQAIAITTTQAAQLADALKPLDTAQHALLT
RLAESQRPLVVTLLAEDAALTSTPEAYLKLHLISHRLVKPHGLNLTGIFPLLPNVAWTNQGAVDLAELAERQLEARLKGD
LLEVFSVDKFPKMTDYVVPAGVRIADTARVRLGAYVGEGTTVMHEGFINFNAGTQGPGMIEGRVSAGVFVGKGSDLGGGC
STMGTLSGGGNIVISVGEGCLIGANAGIGIPLGDRNTVESGLYITAGTKVSLLDENDQLVKVVKARDLAGQSDLLFRRNS
QTGTVECKTHKSAIELNEALHAHN
>Mature_343_residues
SATLFSLAFGVGTQNRQGDWLEVFYAQPLLQPAGELVDAIAPLLGYAGGNQAIAITTTQAAQLADALKPLDTAQHALLTR
LAESQRPLVVTLLAEDAALTSTPEAYLKLHLISHRLVKPHGLNLTGIFPLLPNVAWTNQGAVDLAELAERQLEARLKGDL
LEVFSVDKFPKMTDYVVPAGVRIADTARVRLGAYVGEGTTVMHEGFINFNAGTQGPGMIEGRVSAGVFVGKGSDLGGGCS
TMGTLSGGGNIVISVGEGCLIGANAGIGIPLGDRNTVESGLYITAGTKVSLLDENDQLVKVVKARDLAGQSDLLFRRNSQ
TGTVECKTHKSAIELNEALHAHN

Specific function: Unknown

COG id: COG2171

COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.3.1.117

Molecular weight: Translated: 36131; Mature: 36000

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATLFSLAFGVGTQNRQGDWLEVFYAQPLLQPAGELVDAIAPLLGYAGGNQAIAITTTQ
CCCCCEEHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECH
AAQLADALKPLDTAQHALLTRLAESQRPLVVTLLAEDAALTSTPEAYLKLHLISHRLVKP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHEEEEHHHHHCCC
HGLNLTGIFPLLPNVAWTNQGAVDLAELAERQLEARLKGDLLEVFSVDKFPKMTDYVVPA
CCCCEEEHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEECCC
GVRIADTARVRLGAYVGEGTTVMHEGFINFNAGTQGPGMIEGRVSAGVFVGKGSDLGGGC
CCEEECCCEEEEEEEECCCEEEEEECEEEECCCCCCCCEEECEEECEEEEECCCCCCCCC
STMGTLSGGGNIVISVGEGCLIGANAGIGIPLGDRNTVESGLYITAGTKVSLLDENDQLV
CCCEEECCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCHHH
KVVKARDLAGQSDLLFRRNSQTGTVECKTHKSAIELNEALHAHN
HHHHHHCCCCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SATLFSLAFGVGTQNRQGDWLEVFYAQPLLQPAGELVDAIAPLLGYAGGNQAIAITTTQ
CCCCEEHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECH
AAQLADALKPLDTAQHALLTRLAESQRPLVVTLLAEDAALTSTPEAYLKLHLISHRLVKP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHEEEEHHHHHCCC
HGLNLTGIFPLLPNVAWTNQGAVDLAELAERQLEARLKGDLLEVFSVDKFPKMTDYVVPA
CCCCEEEHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEECCC
GVRIADTARVRLGAYVGEGTTVMHEGFINFNAGTQGPGMIEGRVSAGVFVGKGSDLGGGC
CCEEECCCEEEEEEEECCCEEEEEECEEEECCCCCCCCEEECEEECEEEEECCCCCCCCC
STMGTLSGGGNIVISVGEGCLIGANAGIGIPLGDRNTVESGLYITAGTKVSLLDENDQLV
CCCEEECCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCHHH
KVVKARDLAGQSDLLFRRNSQTGTVECKTHKSAIELNEALHAHN
HHHHHHCCCCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinyl-CoA; (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate; H2O

Specific reaction: succinyl-CoA + (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + H2O = CoA + (R)-2-(succinylamino)-6-oxoheptanedioate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA